Reactions of Charged Substrates. 4. The Gas-Phase Dissociation of (4-Substituted benzyl)dimethylsulfoniums and -pyridiniums

The relative rates for the gas-phase dissociation RX(+) --> R(+) + X degrees of five (4-Y-substituted benzyl)dimethysulfoniums (Y = MeO, Me, H, Cl, and NO(2)) and 24 (4-Y-substituted benzyl)-3'-Z-pyridiniums (complete series for Z = CN, Cl, CONH(2), and H, and 4-methoxy- and 4-nitrobenzyls for Z = F and CH(3)CO) were measured using liquid secondary ion mass spectrometry. The Hammett plot (vs deltaDeltaG degrees or sigma(+)) is linear for the sulfoniums, but plots for the four pyridinium series have a drastic break between the 4-Cl and 4-NO(2) substrates. Br?nsted-like plots for the pyridiniums show a strong leaving group effect only for 4-nitrobenzyls. An analysis of these linear free energy relations with supporting evidence from semiempirical computations suggests that collisionally activated pyridinium substrates dissociate by two pathways, direct dissociation and through an ion-neutral complex intermediate. Comparison of these results with results for the solution reactions of some of these compounds shows that the mechanism is different in the gas and solution phases. Sufficient experimental data are not available to assign a mechanism for dissociation to the sulfonium series, but computational results show characteristics of a direct dissociative mechanism.     

Structure of Lipid A from Pseudomonas corrugata by electrospray ionization quadrupole time-of-flight tandem mass spectrometry

The use of the electrospray ionization quadrupole time-of-flight tandem mass spectrometry (ESI-QTOFMS) technique for the structural determination of Lipid A from Pseudomonas corrugata is described. This technique appears to be more sensitive with respect to other commonly used tandem mass spectrometric approaches, and was very valuable in the structural determination of the highly heterogeneous Lipid A fractions. The Lipid A fraction consists mainly of a pentaacyl component in which 3-hydroxydecanoyl [10:0(3-OH)] and 3-hydroxydodecanoyl [12:0(3-OH)] are linked as primary acyl substituents to the classical bisphosphorylated beta-(1' --> 6)-linked D-glucosamine disaccharide. Secondary substitution of N-acyl fatty acids with dodecanoyl residues [12:0] and/or its 2-OH derivatives was also observed.     

Determination of alpidem and its metabolites in human plasma by high-performance liquid chromatography and fluorimetric detection

A high-performance liquid chromatographic method has been developed for the simultaneous determination of alpidem and its metabolites in human plasma. The method involved a single extraction of the parent drug and metabolites into diethyl ether from alkalinized plasma, evaporation of the organic solution and chromatography of the extracts on a C18 column coupled to a fluorimetric detector. An internal standard was used for the quantitative determination of the compounds. The method was selective for alpidem and three of its metabolites and has a limit of detection of less than 1 ng ml-1 for all the compounds. Since the chromatographic run took more than 20 min, the chromatographic process was fully automated and performed overnight.     

Insecticidal Activity of Organic Extracts of Solidago graminifolia and Its Main Metabolites (Quercetin and Chlorogenic Acid) against Spodoptera frugiperda: An In Vitro and In Silico Approach

Spodoptera frugiperda (S. frugiperda) remains a global primary pest of maize. Therefore, new options to combat this pest are necessary. In this study, the insecticidal activity of three crude foliar extracts (ethanol, dichloromethane, and hexane) and their main secondary metabolites (quercetin and chlorogenic acid) of the species Solidago graminifolia (S. graminifolia) by ingestion bioassays against S. frugiperda larvae was analyzed. Additionally, the extracts were phytochemically elucidated by ultra-performance liquid chromatography-mass spectrometry (UPLC-MS) analysis. Finally, an in silico study of the potential interaction of quercetin on S. frugiperda acetylcholinesterase was performed. Organic extracts were obtained in the range from 5 to 33%. The ethanolic extract caused higher mortality (81%) with a half-maximal lethal concentration (LC₅₀) of 0.496 mg/mL. Flavonoid secondary metabolites such as hyperoside, quercetin, isoquercetin, kaempferol, and avicularin and some phenolic acids such as chlorogenic acid, solidagoic acid, gallic acid, hexoside, and rosmarinic acid were identified. In particular, quercetin had an LC₅₀ of 0.157 mg/mL, and chlorogenic acid did not have insecticidal activity but showed an antagonistic effect on quercetin. The molecular docking analysis of quercetin on the active site of S. frugiperda acetylcholinesterase showed a −5.4 kcal/mol binding energy value, lower than acetylcholine and chlorpyrifos (−4.45 and −4.46 kcal/mol, respectively). Additionally, the interactions profile showed that quercetin had π–π interactions with amino acids W198, Y235, and H553 on the active site.     

Covalent labeling of a chromatin reader domain using proximity-reactive cyclic peptides

Chemical probes for chromatin reader proteins are valuable tools for investigating epigenetic regulatory mechanisms and evaluating whether the target of interest holds therapeutic potential. Developing potent inhibitors for the plant homeodomain (PHD) family of methylation readers remains a difficult task due to the charged, shallow and extended nature of the histone binding site that precludes effective engagement of conventional small molecules. Herein, we describe the development of novel proximity-reactive cyclopeptide inhibitors for PHD3—a trimethyllysine reader domain of histone demethylase KDM5A. Guided by the PHD3–histone co-crystal structure, we designed a sidechain-to-sidechain linking strategy to improve peptide proteolytic stability whilst maintaining binding affinity. We have developed an operationally simple solid-phase macrocyclization pathway, capitalizing on the inherent reactivity of the dimethyllysine ε-amino group to generate scaffolds bearing charged tetraalkylammonium functionalities that effectively engage the shallow aromatic ‘groove’ of PHD3. Leveraging a surface-exposed lysine residue on PHD3 adjacent to the ligand binding site, cyclic peptides were rendered covalent through installation of an arylsulfonyl fluoride warhead. The resulting lysine-reactive cyclic peptides demonstrated rapid and efficient labeling of the PHD3 domain in HEK293T lysates, showcasing the feasibility of employing proximity-induced reactivity for covalent labeling of this challenging family of reader domains.

We describe the development of covalent cyclic peptide ligands which target a chromatin methylation reader domain using a proximity-reactive sulfonyl fluoride moiety.     

New lower semicontinuity results for polyconvex integrals

Summary We study integral functionals of the formF(u, )= f(u)dx, defined foru C¹(;R ^k), R ⁿ . The functionf is assumed to be polyconvex and to satisfy the inequalityf(A) c₀¦(A)¦ for a suitable constant c₀ > 0, where (A) is then-vector whose components are the determinants of all minors of thek×n matrixA. We prove thatF is lower semicontinuous onC ¹(;R ^k) with respect to the strong topology ofL ¹(;R ^k). Then we consider the relaxed functional , defined as the greatest lower semicontinuous functional onL ¹(;R ^k ) which is less than or equal toF on C¹(;R ^k). For everyu BV(;R ^k) we prove that (u,) f(u)dx+c₀¦D^su¦(), whereDu=u dx+D^su is the Lebesgue decomposition of the Radon measureDu. Moreover, under suitable growth conditions onf, we show that (u,)= f(u)dx for everyu W^1,p(;R ^k), withp min{n,k}. We prove also that the functional (u, ) can not be represented by an inte- gral for an arbitrary functionu BV_loc(R ⁿ;R ^k). In fact, two examples show that, in general, the set function (u, ) is not subadditive whenu BV_loc(R ⁿ;R ^k), even ifu W _loc ^1,p (R ⁿ;R ^k) for everyp < min{n,k}. Finally, we examine in detail the properties of the functionsu BV(;R ^k) such that (u, )= f(u)dx, particularly in the model casef(A)=¦(A)¦.     

Cems characterization of SnO2 films obtained by sputtering and sol-gel route

Conversion electron Mössbauer spectroscopy (CEMS) has been used to study tin oxide films prepared by sol-gel dipping and sputtering. The spectra of films prepared by sol-gel route result close to that of crystalline SnO₂ after heat treatment at a temperature as low as 150°C. The Mössbauer parameters of as sputter deposited films indicate that the structure of the deposited stannic oxide has an amorphous character more pronounced for thinner samples. The structure becomes predominantly that of crystalline SnO₂ by heating at 550°C for 30 min provided the film thickness is higher than 10 nm.     

DRIFTS study of surface reactivity to NO2 by zinc nanoparticle aggregates and zinc hollow nanofibers

Zinc nanostructures synthesized with different morphologies from the same evaporation/condensation technique are studied with concern to surface reactivity to NO₂ by Diffuse Reflectance Infrared Fourier Transformed Spectroscopy (DRIFTS). Synthesis of nanopowders is obtained, according to previous work, by gas flow thermal evaporation at 540 °C of bulk Zn grains. Two types of Zn powders are obtained and studied in experiments. The first one is collected on the cold walls of the reactor as a deposit produced by thermophoretic effect. It is constituted by grains (∼10 μm) originated by the stratification of smaller aggregates (∼200 nm) and isolated primary particles (∼50 nm) born in the gas flow. The second type of powder is grown from the condensation of Zn chemical vapors within the expansion orifice of the quartz reactor after relatively long time (∼1 h) deposition process. It is constituted mainly by hollow Zn nanofibers with external and internal diameter about 100 and 60 nm. Preliminary characterization of the two types of powders is made by SEM, TEM, XRD. Thereafter, the two types of samples are studied by DRIFTS at variable temperature (VT). Comparison is made between the home-synthesized nanopowders with respect to commercial Zn standard dust. The Zn hollow nanofibers when exposed to NO₂ are found to exhibit dramatic reactivity, which is not observed at all either in the case of clustered aggregate zinc or of commercial Zn dust powders. Results indicate that, at increasing temperature from RT to 300 °C, the hollow nanofibers surface reacts distinctively with adsorbant gas NO₂, with contemporary formation of a progressively growing narrow absorption band at 2500 cm⁻¹ and contemporary depression of a doublet (∼1600-1628 cm⁻¹) band. In order to justify this striking spectral feature, we propose the occurring of a possible polymerization process at nanofibers surface where most probably as a consequence of pre-treatment and exposure to gas NO₂ a very thin film of ZnO is formed. The possible role of huge specific surface of hollow nanofibers as inferred by preliminary SEM, TEM, XRD studies is discussed.     

The LAPEX experiment for observation of the supernova SN 1987A in hard X-rays

Summary The LAPEX payload is described in the configuration that will be launched to observe the supernova SN 1987A. The balloon flight will be performed from Alice Springs (Australia) in April 1989 as a part of a NASA balloon campaign. The experiment will allow simultaneous observations of source and background in order to minimize systematic errors due to background variations. The limiting flux sensitivity of the instrument in the (20÷200) keV energy band is 4·10⁻⁶ ph/(cm²s keV) or ∼2.5 mCrab for a 10⁴ s observation of SN 1987A. The presence of a⁵⁷Co emission line in the SN 1987A photon spectrum could be detected down to an intensity level of ∼8·10⁻⁵ photons/cm²s as at 99.7% confidence level. The high resolution of the event timing (<0.1 ms) will make it possible to detect millisecond pulsations with amplitudes down to ∼4% of the expected average flux from SN 1987A in the (20÷60) keV band. To speed up publication, the proofs were not sent to the authors and were supervised by the Scientific Committee.     

Thermal expansion of supported and freestanding graphene: lattice constant versus interatomic distance

By using ab initio molecular dynamics calculations, we show that even where the graphene lattice constant contracts, as previously reported for freestanding graphene below room temperature, the average carbon-carbon distance increases with temperature, in both free and supported graphene. This results in a larger corrugation at higher temperature, which can affect the interaction between graphene and the supporting substrate. For a weakly interacting system as graphene/Ir(111), we confirm the results using an experimental approach which gives direct access to interatomic distances.