Ionic strength of electrospray droplets affects charging of DNA oligonucleotides

The fundamental aspects of charging in electrospray ionization (ESI) are hotly debated. In the present study, ESI charging of DNA oligonucleotides was explored in both positive (ESI+) and negative (ESI?) polarity using mass spectrometry detection. Single‐stranded 12‐mer CCCCAATTCCCC in buffer solution (aqueous NH₄Ac, 100 mM) produced similar charge state distribution (CSD) in either ESI+ or ESI?. Similarity of CSD in ESI+ and ESI? was also observed for the double‐stranded 12‐mer CGCGAATTCGCG. By adding typical low‐vapor reagents (e.g. m‐nitro benzyl alcohol, m‐NBA; sulfolane) into the same buffer solution (<0.5% w/v), both CCCCAATTCCCC and CGCGAATTCGCG revealed strong supercharging (SC) effect in ESI?, while very little or no SC effect was observed in ESI+. With either sulfolane or m‐NBA, the CGCGAATTCGCG duplex dissociated into single strands in ESI?. No SC was observed in both ESI+ and ESI? for thermally denatured CGCGAATTCGCG duplex in NH₄Ac buffer without the reagents. These findings are difficult to reconcile with the earlier model, which attributes SC in aqueous buffer solution to the conformational changes of analytes. Our observations suggest that the ionic strength of ESI droplets strongly affects the CSD of biopolymers such as DNA oligonucleotides and that SC effect is related to the depletion of ionic strength during the ESI process. Copyright © 2014 John Wiley & Sons, Ltd.     

Synthesis and properties of LiMIIPO4 (MII = Mg,Mn0.5Mg0.5, Co0.5Mg0.5) affected by isodivalent doping and Li-sources

NH₄M^IIPO₄·H₂O (M^II = Mg, Mn_0.5Mg_0.5, Co_0.5Mg_0.5) were synthesized by direct-precipitating method. The olivine-like LiM^IIPO₄ were successfully generated through the solid state reaction between the synthesized NH₄M^IIPO₄·H₂O precursors and two different Li-sources (Li₂CO₃ or LiOH·H₂O). The NH₄M^IIPO₄·H₂O and LiM^IIPO₄ compounds were confirmed by TG/DTG/DTA, AAS/AES, FTIR and XRD methods. The structural and morphological properties of LiM^IIPO₄ compounds were studied by XRD and SEM, respectively. The XRD reflection shifts of olivine-like LiM^IIPO₄ from the Li-source of Li₂CO₃ revealed changing toward higher diffraction angles than that of LiM^IIPO₄ from the Li-source of LiOH·H₂O. The XRD shifts of LiM_0.5Mg_0.5PO₄ (M = Mn or Co) compounds confirmed the formation of the single phase of isodivalent doping of Mn²⁺ and Co²⁺ ions according to the change in the lattice parameters and cell volumes. The morphological investigations of the LiM^IIPO₄ obtained from Li₂CO₃ system illustrated the grain-like shape particles having smaller size of about 150–400 nm on account of the sequential transformations of types: deammoniation, dehydration, polycondensation and decarbonization. Conversely, the larger size particles (300–700 nm) of the LiM^IIPO₄ obtained from LiOH·H₂O were observed due to the shorter transformation path through the reactions of types: deammoniation and dehydration without polycondensation and decarbonization.     

A High‐Pressure Polymorph of Phosphorus Nitride Imide

Phosphorus nitride imide, PN(NH), is of great scientific importance because it is isosteric with silica (SiO₂). Accordingly, a varied structural diversity could be expected. However, only one polymorph of PN(NH) has been reported thus far. Herein, we report on the synthesis and structural investigation of the first high‐pressure polymorph of phosphorus nitride imide, β‐PN(NH); the compound has been synthesized using the multianvil technique. By adding catalytic amounts of NH₄Cl as a mineralizer, it became possible to grow single crystals of β‐PN(NH), which allowed the first complete structural elucidation of a highly condensed phosphorus nitride from single‐crystal X‐ray diffraction data. The structure was confirmed by FTIR and ³¹P and ¹H solid‐state NMR spectroscopy. We are confident that high‐pressure/high‐temperature reactions could lead to new polymorphs of PN(NH) containing five‐fold‐ or even six‐fold‐coordinated phosphorus atoms and thus rivalling or even surpassing the structural variety of SiO₂.     

Synthesis and Conformational Analysis of Cyclic Homooligomers from Pyranoid ε‐Sugar Amino Acids

New pyranoid ε‐sugar amino acids were designed as building blocks, in which the carboxylic acid and the amine groups were placed in positions C2 and C3 with respect to the tetrahydropyran oxygen atom. By using standard solution‐phase coupling procedures, cyclic homooligomers containing pyranoid ε‐sugar amino acids were synthesized. Conformation analysis was performed by using NMR spectroscopic experiments, FTIR spectroscopic studies, X‐ray analysis, and a theoretical conformation search. These studies reveal that the presence of a methoxy group in the position C4 of the pyran ring produces an important structural change in the cyclodipeptides. When the methoxy groups are present, the structure collapses through interresidue hydrogen bonds between the oxygen atoms of the pyran ring and the amide protons. However, when the cyclodipeptide lacks the methoxy groups, a U‐shape structure is adopted, in which there is a hydrophilic concave face with four oxygen atoms and two amide protons directed toward the center of the cavity. Additionally, we found important evidence of the key role played by weak electrostatic interactions, such as the five‐membered hydrogen‐bonded pseudocycles (C₅) between the amide protons and the ether oxygen atoms, in the conformation equilibrium of the macrocycles and in the cyclization step of the cyclic tetrapeptides.     

Dramatic Influence of an Anionic Donor on the Oxygen‐Atom Transfer Reactivity of a MnV–Oxo Complex

Addition of an anionic donor to an Mn^V(O) porphyrinoid complex causes a dramatic increase in 2‐electron oxygen‐atom‐transfer (OAT) chemistry. The 6‐coordinate [Mn^V(O)(TBP₈Cz)(CN)]^? was generated from addition of Bu₄N⁺CN^? to the 5‐coordinate Mn^V(O) precursor. The cyanide‐ligated complex was characterized for the first time by Mn K‐edge X‐ray absorption spectroscopy (XAS) and gives Mn?O=1.53 Å, Mn?CN=2.21 Å. In combination with computational studies these distances were shown to correlate with a singlet ground state. Reaction of the CN^? complex with thioethers results in OAT to give the corresponding sulfoxide and a 2e^?‐reduced Mn^III(CN)^? complex. Kinetic measurements reveal a dramatic rate enhancement for OAT of approximately 24 000‐fold versus the same reaction for the parent 5‐coordinate complex. An Eyring analysis gives ΔH^≠=14 kcal mol^?1, ΔS^≠=?10 cal mol^?1 K^?1. Computational studies fully support the structures, spin states, and relative reactivity of the 5‐ and 6‐coordinate Mn^V(O) complexes.     

On the Electronic Structure and Photochemistry of Coordinatively Unsaturated Complexes: The Case of Nickel Bis‐dinitrogen,Ni(N2)2

The electronic ground and excited states of the coordinatively unsaturated complex Ni(η¹‐N₂)₂, isolated in an Ar matrix, are analyzed in detail by vibrational and electronic absorption and emission spectroscopies allied with quantum chemical calculations. The bond force constants are determined from a normal coordinate analysis and compared with those of the isoelectronic carbonyl complex. The consequences for the bond properties are discussed, and the trend in the force constants is compared with the standard formation enthalpies. The linear complex Ni(η¹‐N₂)₂ with two terminal dinitrogen ligands can be photoisomerized to two isomeric, metastable forms Ni(η¹‐N₂)(η²‐N₂) and Ni(η²‐N₂)₂, with one and two side‐on coordinated dinitrogen ligands, respectively.     

Bright White‐Light Emission from a Single Organic Compound in the Solid State

White‐light‐emitting materials and devices have attracted enormous interest because of their great potential for various lighting applications. We herein describe the light‐emitting properties of a series of new difunctional organic molecules of remarkably simple structure consisting of two terminal 4‐pyridone push–pull subunits separated by a polymethylene chain. They were found to emit almost “pure” white light as a single organic compound in the solid state, as well as when incorporated in a polymer film. To the best of our knowledge, they are the simplest white‐light‐emitting organic molecules reported to date.     

The Assembly‐Disassembly‐Organization‐Reassembly Mechanism for 3D‐2D‐3D Transformation of Germanosilicate IWW Zeolite

Hydrolysis of germanosilicate zeolites with the IWW structure shows two different outcomes depending on the composition of the starting materials. Ge‐rich IWW (Si/Ge=3.1) is disassembled into a layered material (IPC‐5P), which can be reassembled into an almost pure silica IWW on treatment with diethoxydimethylsilane. Ge‐poor IWW (Si/Ge=6.4) is not completely disassembled on hydrolysis, but retains some 3D connectivity. This structure can be reassembled into IWW by incorporation of Al to fill the defects left when the Ge is removed.