Fullerene C60 as a η5- and η6-ligand in sandwich-type π-complexes with transition metals

The molecular and electronic structures of some hypothetical sandwich-type -complexes of transition metals with fullerene C₆₀ were modeled. The M-C₆₀ bonds in ⁵-C₆₀MCp⁺ complexes (M = Fe, Ru, Os) are less strong than the M-Cp bonds in ferrocene, ruthenocene, and osmocene, respectively. The ⁶-C₆₀MC₆H₆ complexes (M = Cr, Mo, W) should be less stable than their classical analogs (C₆H₆)M(C₆H₆). The coordination of a metal atom with the fullerene at its pentagonal face is more energetically favorable than at a hexagonal face.Translated fromIzyestiya Akademii Nauk. Seriya Khimicheskaya, No. 4, pp. 598–601, April, 1994.We are grateful to V. I. Sokolov for discussion of the results obtained. This study was supported by the Russian Foundation for Basic Research (grants 93-03-4101 and 93-03-18725).     

Infrared depletion spectroscopy of the doubly hydrogen-bonded aniline–(tetrahydrofuran)2 complex produced in supersonic jet

The vibrational frequencies of the N–H stretching modes of aniline after forming a strong doubly H-bonded complex with tetrahydrofuran (THF) are measured with infrared depletion spectroscopy that uses cluster-size-selective resonance-enhanced multiphoton ionization (REMPI) time-of-flight mass spectrometry. Two strong infrared absorption features observed at 3355 and 3488 cm⁻¹ are assigned to the symmetric and antisymmetric N–H stretching vibrations of the 1:2 aniline–THF complex, respectively. The red-shifts of the N–H stretching vibrations of aniline agree with the ab initio calculated (MP2/6-31G**) aniline-(THF)₂ structure in which both aniline N–H bonds interact with the oxygen atom of THF through two hydrogen bonds. The calculated binding energy is found to be 29.6 kJ mol⁻¹ after corrections for basis set superposition error (BSSE) and zero-point energy. The calculated structure revealed that the angle between the N–H bonds in the NH₂ group increased to 112.5° in the aniline–(THF)₂ complex from that of 109.8° in the aniline. The electronic 0–0 band origin for the S₁ ← S₀ transition is observed at 32,900 cm⁻¹ in the aniline–(THF)₂ complex, giving a red-shift of 1129 cm⁻¹ from that of the aniline molecule.     

Density functional calculations of large systems containing heavy elements by means of the regionalization algorithm

The compounds containing transition metals orother heavy elements play important roles in chemistry.They possess diverse properties which have been util-ized in numerous functional materials. Some of theseproperties are also involved in biological processes.However, it is very difficult to study these compoundsdeeply by means of quantum chemical methods, be-cause in these systems usually there are a large amountof electrons, the distribution of the frontier orbitals isdense, the correlation be…     

Improving the efficiency and reliability of free energy perturbation calculations using overlap sampling methods

A challenge in free energy calculation for complex molecular systems by computer simulation is to obtain a reliable estimate within feasible computational time. In this study, we suggest an answer to this challenge by exploring a simple method, overlap sampling (OS), for producing reliable free-energy results in an efficient way. The formalism of the OS method is based on ensuring sampling of important overlapping phase space during perturbation calculations. This technique samples both forward and reverse free energy perturbation (FEP) to improve the free-energy calculation. It considers the asymmetry of the FEP calculation and features an ability to optimize both the precision and the accuracy of the measurement without affecting the simulation process itself. The OS method is tested at two optimization levels: no optimization (simple OS), and full optimization (equivalent to Bennett's method), and compared to conventional FEP techniques, including the widely used direct FEP averaging method, on three alchemical mutation systems: (a) an anion transformation in water solution, (b) mutation between methanol and ethane, and (c) alchemical change of an adenosine molecule. It is consistently shown that the reliability of free-energy estimates can be greatly improved using the OS techniques at both optimization levels, while the performance of Bennett's method is particularly striking. In addition, the efficiency of a calculation can be significantly improved because the method is able to (a) converge to the right answer quickly, and (b) work for large perturbations. The basic two-stage OS method can be extended to admit additional stages, if needed. We suggest that the OS method can be used as a general perturbation technique for computing free energy differences in molecular simulations.     

Equilibrium structures of isolated (halogenated) fluorolithiomethanes

Equilibrium structures of isolated fluorolithiomethanes (1-3), chlorofluorolithiomethanes (4-6), bromofluorolithiomethanes (7-9), and bromochlorofluorolithiomethane (10) have been calculated at the HF/6-31+G(d,p) and MP2/6-31+G(d,p) levels. Depending on the number of halogens and the computational method employed, five distinct minimum structures could be recognized, viz. normal tetrahedral without coordination of halogen (T), trigonal bidentate with coordination of carbon and halogen to lithium (BCX), tetrahedral tridentate with coordination of carbon and two halogens to lithium (TCX2), quadrilateral bidentate with coordination of two halogens to lithium (BX2), and bipyramidal tridentate with coordination of three halogens to lithium (TX3).     

The absolute sign of J coupling constants determined using the order matrix calculation

A novel methodology using the order matrix calculation to determine the absolute sign of spin-spin couplings based on the structure of organic compounds is presented. The sign of the residual dipolar coupling (RDC) depends on the sign of corresponding scalar spin-spin coupling constant and the sign of the RDC has a dramatic influence on the order matrix calculation. Therefore, the sign of the spin-spin coupling constant can be obtained by an order matrix calculation through the corresponding RDC. Six types of spin-spin coupling constants, including 2J(H,H), 1J(C,F), 2J(C,F), 3J(C,F), 2J(F,H) and 3J(F,H), were obtained simultaneously. Except for 3J(C,F) where the measured RDCs have very small magnitudes, the signs were determined unambiguously.     

聚合物{[CuII(Hpb) (mal)]H2O}n :单体的量子化学计算和磁性研究

{[Cu^Ⅱ（Hpb）（mal）]H=O}n （Hpb=2-2＇-pyridylbenzimidazole, mal=maleic acid） is a helical chain-like polymer complex. In order to investigate the electronic structure of the complex, the monomer Cu^Ⅱ（Hpb）（mal） was obturated with different functional groups respectively. For these selective segments, the geometry optimizations were conducted by using hybrid DFT （B3LYP）methods to find that the structure obturated with H2O was better consistent with the experiment, and then this model would be used to latter calculations, such as the frontier molecular orbital and the NBO charge population analysis. In addition the magnetic behaviors of this complex were analyzed by experiments and the weak antiferromagnetic couple between copper（Ⅱ） ions was observed. The exchange coupling constant was calculated by DFT based on the spin broken symmetry formalism. The calculated coupling constants were in good agreement with the experimental data.     

Crystal Structure, Thermal Analysis and Theoretical Calculation of a One-dimensional Chain Complex [Zn（dafo）2（H2O）2]（NO3）2

Introduction Molecular recognition and molecular self-assemblycarried out by cooperation of the weak interactions(electrostatic reaction, hydrogen bonds, van der Waalsforce, short-range repulsive force, etc) are the commonphenomena in nature. In recent years, the research onsupramolecular complex has been a crossing focus ofseveral subjects such as chemistry, physics, biology,material and information.1 Supramolecular complex hasa wide application foreground in material, catalysis,conductor,…     

Erratum: Separability between valence and conduction bands in transition metal clusters

Density Functional Theory (DFT) and direct ab initio molecular dynamics (MD) calculations were applied to the hydrogen molecule trapped in a water cluster composed of 12 water molecules (H₂O)₁₂. The static DFT calculation showed that the H₂ molecule is trapped in the center of mass of (H₂O)₁₂. The vibrational frequency of the H–H stretching mode of the H₂ molecule trapped in the water cluster was blueshifted from that in vacuo. On the other hand, the vibrational frequency of H₂ in water‐hydrogen 1:1 complex (H₂O–H₂) was redshifted. A direct ab initio MD calculation of H₂(H₂O)₁₂ at 50 K indicated that the H₂ molecule is rotated freely around the center of mass of the water cluster. The origin of the spectral shift of H₂ in water ice is discussed on the basis of the theoretical results. © 2004 Wiley Periodicals, Inc. Int J Quantum Chem, 2005     

质子化硼烷正离子体系电子结构的理论研究

本文用a b initio计算法和近似a b initio计算法(PRDDO)研究了质子化硼烷正离子体系的电子结构,给出了一些正离子体系的优化几何构型并讨论了它们的成键情况。计算的硼烷分子质子亲和势与实验值相当吻合。