解线性最小二乘问题的一个新并行算法

讨论了求解无约束线性最小二乘问题的一种并行单纯形法以及对它的改进算法并行共轭梯度—单纯形法 .算法本身具有很强的并行机制 ,能够充分地发挥并行机快速省时的特点 .本文也对算法做了理论分析 ,对算法的收敛性给予了证明 (在二维情形下 ) .最后做了数值实验 (由于软硬件条件的限制 ,并行算法未能在并行计算机上实现 ,鉴于这种情况 ,我们所做的数值实验均是在串行机上完成的 )     

基因组重排问题的一个近似算法

分子生物学中基因无方向的反向基因组重排问题在数学上已被证明是一个NP困难问题．基于断点图的概念，给出一个时间复杂性为O(max{b^(π)，nb(π)})，空间复杂性为0(n)的求其近似最优解的算法．其中n为基因组中基因个数，π=(π1,π2，…，πn)表示n个基因的一种排列，b(π)表示排列π中的断点数．数据实验的结果表明，该近似算法可以求得较好的结果．     

序列模式挖掘的两种典型算法及比较

序列模式挖掘是数据挖掘的重要分支,GSP算法与PSP算法是序列模式挖掘中的两种典型算法。本文介绍了这两种算法并对其进行了分析与比较。     

CONVERGENCE OF CASCADE ALGORITHMS AND SMOOTHNESS OF REFINABLE DISTRIBUTIONS

In this paper, the author at first develops a method to study convergence of the cascade algorithm in a Banach space without stable assumption on the initial (see Theorem 2.1), and then applies the previous result on the convergence to characterizing compactly supported refinable distributions in fractional Sobolev spaces and Holder continuous spaces (see Theorems 3.1, 3.3, and 3.4). Finally the author applies the above characterization to choosing appropriate initial to guarantee the convergence of the cascade algorithm (see Theorem 4.2).     

多维函数全局寻优的团队进步算法

通过模仿团队进步需要的学习、探索行为和成员更新规则,提出了一种新颖的双群体演化算法,称为团队进步算法(TPA).算法将一个团队的成员分为精英和普通组,建立了两组的学习样板,定义了学习和探索运算,并合理设定了成员更新规则.两组成员在搜索过程中出现了明显分工,使算法兼备了全局搜索、局部搜索和定向搜索的能力.数值试验结果验证了新算法具有实现简单、全局寻优成功率高、收敛快、计算量少、坚韧性强和参数选择相对容易等特性,对解决优化应用问题具有较大的价值.     

Finding finer functions for partially characterized proteins by protein-protein interaction networks

Based on high-throughput data, numerous algorithms have been designed to find functions of novel proteins. However, the effectiveness of such algorithms is currently limited by some fundamental factors, including (1) the low a-priori probability of novel proteins participating in a detailed function; (2) the huge false data present in high-throughput datasets; (3) the incomplete data coverage of functional classes; (4) the abundant but heterogeneous negative samples for training the algorithms; and (5) the lack of detailed functional knowledge for training algorithms. Here, for partially characterized proteins, we suggest an approach to finding their finer functions based on protein interaction sub-networks or gene expression patterns, defined in function-specific subspaces. The proposed approach can lessen the above-mentioned problems by properly defining the prediction range and functionally filtering the noisy data, and thus can efficiently find proteins’ novel functions. For thousands of yeast and human proteins partially characterized, it is able to reliably find their finer functions (e.g., the translational functions) with more than 90% precision. The predicted finer functions are highly valuable both for guiding the follow-up wet-lab validation and for providing the necessary data for training algorithms to learn other proteins.     

A parallel method for time discretization of parabolic equations based on Laplace transformation and quadrature

We consider the discretization in time of an inhomogeneous parabolicequation in a Banach space setting, using a representation ofthe solution as an integral along a smooth curve in the complexleft half-plane which, after transformation to a finite interval,is then evaluated to high accuracy by a quadrature rule. Thisreduces the problem to a finite set of elliptic equations withcomplex coefficients, which may be solved in parallel. The paperis a further development of earlier work by the authors, wherewe treated the homogeneous equation in a Hilbert space framework.Special attention is given here to the treatment of the forcingterm. The method is combined with finite-element discretizationin spatial variables.     

On computation of the greatest common divisor of several polynomials over a finite field

We propose a probabilistic algorithm to reduce computing the greatest common divisor of m polynomials over a finite field (which requires computing m−1 pairwise greatest common divisors) to computing the greatest common divisor of two polynomials over the same field.     

线性规划联合算法的理论与应用

本在[1]的基础上．较系统的叙述了线性规划联合算法的步骤、相关理论及其应用，指出该算法具有避免人工变量、减少迭代次数、使用灵活、应用方便等特点。     

求解一类非单调线性互补问题的宽邻域内点方法及其计算复杂性

对于一类非单调线性互补问题给出了一种新的算法——宽邻域内点算法，并讨论了其计算复杂性。