FD-TRT耐热逆转录酶的特性分析

从嗜热细菌ＦＤ３００９中克隆并分离纯化得到的耐热逆转录酶（ＦＤ－ＴＲＴ）,逆转录反应在６５℃高温下进行,可克服常温逆转录酶的许多缺点,以酵母核糖体ｒＲＮＡ为模板,以与２５５和１８Ｓ ｒＲＮＡ匹配的寡聚脱氧核苷酸为引物,探明了ＦＤ－ＴＲＴ的最适反应条件： ２５ｍｍｏｌ／Ｌ Ｔｒｉｓ－ＨＣｌ（ｐＨ ８．５,２５℃）,２５ ｍｍｏｌ／Ｌ（ＮＨ４）２ＳＯ４,２ ｍｍｏｌ／Ｌ ＭｎＣｌ２,１００ μｇ／ｍｌ明胶．５ ｕｎｉｔ ＲＮａｓｉｎ,２５０ ｍｍｏｌ／Ｌ ４种 ｄＮＴＰ, １μＣｉ３ Ｈ－ｄＣＴＰ, １２ｕｇ ＲＮＡ,２５ ｐｍｏｌ引物,并在此条件下测得 ＦＤ－ＴＲＴ和 Ｔａｑ ＤＮＡ 聚合酶逆转录活力与聚合酶活力的相对比值分别为０．０５６,０．００４５．     

酶联免疫吸附法直接测定血清雌二醇

本合成了３种不同载体蛋白的雌二醇抗原，研究了载体蛋白免疫原性对雌二醇抗体产生的影响。应用酶联免疫吸附分析法测定了血清中雌二醇，浓度范围为５－１６０ｎｇ／ｍｌ（１．８×１０＾－＾８－５．９×１０＾－＾７ｍｏｌ／Ｌ）．ＲＳＤ％小于１０．％，检测限为１．９７ｎｇ／ｍｌ，相当于９８．５ｐｇ／孔（按空白平均值的二倍标准偏差计算）。另外，本还建立了一种用考马斯亮蓝Ｇ－２５０测定半抗原与蛋白结合比的方法，提     

Determining PPARγ-ligand binding affinity using fluorescent assay with cis-parinaric acid as a probe

Upon the study of small-molecules binding to proteins, the traditional methods for calculating dissociation constants (Kd and Ki) have shortcomings in dealing with the single binding site models. In this paper, two equations have been derived to solve this problem. These two equations are independent of the total concentration or initial degree of saturation of receptor and the activity of the competitive molecule. Through nonlinear fitting against these two equations, Kd value of a probe can be obtained by binding assay, and Ki value of a ligand can be obtained by competitive assay. Moreover, only the total concentrations of receptor([R]t), ligand([L]t) and probe([P]t) are required for the data fitting. In this work, Ki values of some typical ligands of PPARγ were successfully determined by use of our equations, among which the Ki value of PPARγ-LY171883 was reported for the first time.     

In vitro and in silico study of Aloe vera leaf extract against human breast cancer

Abstract

Aloe vera leaf contains some bioactive compounds that have a strong binding affinity toward estrogen receptor as compared to standard drug tamoxifen. In this study, we have found that the IC₅₀ of Aloe vera leaf extract against breast cancer cell line (MCF-7) is 23?µg/mL which is much lower than the IC₅₀ (332?µg/mL) of Aloe vera leaf extract against non-cancerous cell line (NIH-3T3). We have also calculated the total concentration of phenolic acid (385.662?µg/mL), flavonoids (160.402?µg/mL) and alkaloids (276.754?µg/mL) in Aloe vera leaf extract. The free radical scavenging activity of Aloe vera leaf extract is 67% to 89% (at 50 to 300?µg/ml). Our virtual molecular docking study suggests that bioactive compounds like Aloe-emodin (?8.8?Kcal/mol), 7-hydroxy-2,5 dimethylchromone (?7.5?Kcal/mol), Beta-sitosterol (?7.3?Kcal/mol) etc. have a greater binding affinity toward estrogen alpha receptor as compared to standard drug Tamoxifen (?6.4?Kcal/mol).

     

镍（Ⅱ）—p—MPAQ络合物极谱吸附波研究

5-[(对-甲基苯基)偶氮]-8-氨基喹啉(p-MPAQ)的合成及其在光度和荧光分析中的应用已有报道,但对其电化学性质未作研究,本文研究了p-MPAQ的极谱行为,在pH6.8的醋酸铵缓冲溶液中,p-MPAQ在-0.55 V呈现一示波极谱波(P_1),当有Ni~(2+)存在时,在-0.93V处出现一新峰(P_2),加0.0011％Triton X-100后,P_2波高明显增加实验证实该波为络合物     

Detection of single nucleotide polymorphisms using electrospray ionization mass spectrometry: validation of a one-well assay and quantitative pooling studies

Single nucleotide polymorphisms (SNPs) are currently being mapped and databased at a remarkable pace, providing a viable means for understanding disease susceptibility, differential drug response and human evolution. Consequently, there is an increasing demand for SNP genotyping technologies that are simple, rapid, cost effective and readily amenable to automation for high-throughput analyses. In this study, we improved the Survivor Assay, a SNP detection method based on electrospray ionization mass spectrometry (ESI-MS), with several developments. One improvement is the development of a one-well assay, requiring no off-line purification of the polymerase chain reaction product, achieved by simple addition of reagent solution into a single well. Another is the on-line separation of magnesium and dideoxynucleotides using an in-house made monolithic metal chelating column, eliminating any off-line sample preparation prior to mass spectrometric analysis. Here the Survivor Assay is extended from a proof-of-principle concept to a validated method by genotyping six SNPs from five different regions of human genomic DNA in 55 individual samples with 100% accuracy. This improved Survivor Assay eliminates the tedious and time-consuming steps of sample preparation, minimizes sample handing and offers a high-throughput analysis of SNPs by ESI-MS. The current combined preparation and analysis time is 2 min per sample. The simplicity of this method has potential for full automation and parallel chromatography and, thus, reduced analysis time. In addition, we have adapted the Survivor Assay for quantitative SNP analysis in pooled DNA samples. The capabilities and sensitivity of this approach were evaluated. We demonstrate that an allele occurring at a frequency of 2% can consistently be quantitated.     

Development of a competitive liposome-based lateral flow assay for the rapid detection of the allergenic peanut protein Ara h1

A competitive lateral flow assay for detecting the major peanut allergen, Ara h1, has been developed. The detector reagents are Ara h1-tagged liposomes, and the capture reagents are anti-Ara h1 polyclonal antibodies. Two types of rabbit polyclonal antibodies were raised either against the entire Ara h1 molecules (anti-Ara h1 Ab) or against an immunodominant epitope on Ara h1 (anti-peptide Ab). All of them reacted specifically with Ara h1 in Western Blot against crude peanut proteins. Moreover, the anti-Ara h1 Ab was chosen for this assay development because of its highest immunoactivity to Ara h1-tagged liposomes in the lateral flow assay. The calculated limit of detection (LOD) of this assay is 0.45 g mL^–1 of Ara h1 with a dynamic range between 0.1 and 10 g mL^–1 of Ara h1 in buffer. Additionally, the visually determined detection range is from 1 to 10 g mL^–1 of Ara h1 in buffer. Results using this assay can be obtained within 30 min without the need of sophisticated equipment or techniques; therefore, this lateral flow assay has the potential to be a cost-effective, fast, simple, and sensitive method for on-site screening of peanut allergens.     

Fast and highly selective determination of cyanide with 2,2-dihydroxy-1,3-indanedione

A very simple, accurate, fast, selective and sensitive assay of cyanide based on its reaction with 2,2-dihydroxy-l,3-indanedione at basic pH is proposed. As little as 0.01 μg ml⁻¹ of cyanide can be determined. The molar absorptivity may reach 5.1–8.0×10⁴ l mol⁻¹ cm⁻¹ depending on the reaction conditions. Thus, 1 ml of sample solution is mixed with 500 μl of 5 mg ml⁻¹ solution of 2,2-dihydroxy-1,3-indanedione monohydrate in 2% sodium carbonate. The absorbance of the purple color is measured at 510 nm in 1-cm glass cuvettes, 10–15 min after mixing the reagents. The procedure could also be used to identify free CN⁻ in natural waters and hydrocyanic acid in the environment.     

Determination of Human Alpha-Fetoprotein (AFP) by Solid Substrate Room Temperature Phosphorescence Enzyme-Linked Immune Response Using Luminescent Nanoparticles

Luminescent nanoparticles of silicon dioxide (SiO₂) containing fluorescein isothiocyanate (FITC) with a particle size of 20 nm were synthesized using the Sol–Gel method (abbreviated FITC–SiO₂). FITC–SiO₂ nanoparticles whose surfaces are modified (FITC–SiO₂–S–CH₂COOH) can emit strong and stable solid substrate room temperature phosphorescence (SS-RTP) on acetyl cellulose membranes. When the original color-producing agent (R) in the enzyme-linked immunosorbent assay (ELISA) kits for determination of alpha-fetoprotein (AFP) was substituted with (FITC–SiO₂–S–CH₂COOH), the system maintained good FITC–SiO₂ phosphorescence properties. Furthermore, the phosphorescence intensity enhanced markedly after the ELISA reaction. The relationship between the phosphorescence intensity and the content of AFP obeyed Beer’s law. Based on the facts stated above, a new method for the determination of human AFP by SS-RTP-ELISA (using the luminescent nanoparticle as marker) was established. The linear range of this method is 0.040–16.0 pg of human AFP per spot (sample volume: 0.40 μL spot⁻¹, corresponding concentration: 0.10–40.0 ng mL⁻¹). The regression equation of the working curve is ΔIp = −6.289+18.075 m_AFP (pg spot⁻¹) (r = 0.9960, n = 6). The detection limit (LD) of this method calculated by 3 S_b/k is 6.7 fg spot⁻¹ (corresponding concentration: 17 ng L⁻¹). Compared to the ELISA method using a traditional color-producing agent, the new method exhibited a 34.8 times higher sensitivity and a wider linear range. The method has been successfully applied to the determination of human AFP in serum.     

Novel functional activities of anti-dna autoantibodies from sera of patients with lymphoproliferative and autoimmune diseases

DNA-hydrolyzing activity of IgG autoantibodies from sera of patients with various types of lymphoproliferative diseases was investigated. The association of DNA-hydrolyzing activity with the antibody (Ab) fraction has been proved by newly developed affinity-capture assay. Study of abzyme incidence in blood tumors and systemic lupus erythematosis (SLE) revealed linkage of anti-DNA Ab catalysts to mature B-cell tumors, and increased probability of DNA-abzymes formation on the background of autoimmune manifestations. These data suggest possible similarity between mechanisms of abzyme formation in SLE and B-cell lymphomas. A new mechanism of formation of DNA-specific catalytic Abs has been proposed based on the increased crossreactivity of polyclonal DNA-abzymes to DNA-depleted nuclear matrix proteins. The possibility of the abzyme production as Ab to the energetically destabilized ground state of the antigen has been discussed. Preliminary results were obtained that indicate the complement-independent cytotoxicity of anti-DNA autoantibodies isolated from blood of patients with SLE and chronic lymphocytic leukemia.