基于正则表达式与多叉树的DBC网络协议解析方法

为解决CAN网络下DBC （database CAN）协议数据解析和结构表征问题,通过正则表达式解析了DBC文件协议信息,利用多叉树结构,对CAN网络协议信息进行结构表征。针对Intel和Motorola不同格式下的协议解析问题,提出了报文数据场的信号色块表示方法以及起始位转换公式。基于C#语言设计和开发了CAN网络数据管理软件,并将CAN网络协议以DBC数据管理文件输出。用实车试验验证了所提出DBC协议解析方法的有效性。     

菠菜叶酸合成代谢途径基因鉴定及表达谱分析

从菠菜(Spinacia oleracea L.)基因组数据库中筛选鉴定了与菠菜叶酸合成转运,及与C1代谢相关的25个基因,并对其编码的蛋白做进化树和保守域分析,发现叶酸蛋白在进化上表现出保守型和复杂性。用实时荧光定量聚合酶链式反应(qRT-PCR)分析了叶酸含量不同的菠菜的叶酸相关基因表达量,发现在转录水平上只有少数叶酸基因表达量与菠菜叶酸含量有关。     

Ameliorative Effect of Citrus Lemon Peel Extract and Resveratrol on Premature Ovarian Failure Rat Model: Role of iNOS/Caspase-3 Pathway

Premature ovarian failure (POF) is described as a loss of oocytes and the absence of folliculogenesis and is considered an adverse effect of chemotherapeutic drugs, which leads to infertility. Subsequently, the existing inquiry was achieved by exploring the potential suspicious influences of lemon peel extract (LPE), and resveratrol (RES) on cyclophosphamide (CPA) induced-POF. The results showed that CPA-induced POF significantly decreased serum estradiol (E2) and progesterone levels, along with a considerable rise in serum luteinizing hormone (LH) and follicle-stimulating hormone (FSH) levels. Moreover, CPA administration to rats significantly increased the serum level of Malondialdehyde (MDA) and significantly lowered the levels of reduced glutathione (GSH) and superoxide dismutase (SOD); in addition, it increased nuclear factor kappa B (NF-κB) levels, tumor necrosis factor-α (TNF-α), as well as cyclooxygenase 2 (COX-2) with the spread expression of inducible nitric oxide synthase (iNOS) mRNA levels and caspase-3 (Casp3) levels in ovarian tissues versus the control rats. However, treatment with LPE and RES suppressed the triggering of NF- κB pathways, evidenced by a considerable reduction in Casp3 & iNOS mRNA expression level and significant ameliorative effects in all evaluated parameters, as confirmed by the histological and immunohistochemical investigation when comparing the model group. In overall findings, both lemon peel extract and resveratrol can mitigate the adverse effects of CPA-induced POF. Most crucially, its combination therapy is a promising pharmacological agent for this disease.     

电磁轨道炮高速滑动接触电阻的定量表征

从描述电磁轨道炮炮口电压波形的场路模型出发,构建了电枢/轨道高速滑动接触电阻与轨道电流波形、炮口电压波形、电枢膛内速度曲线和轨道结构参数之间的关系,依据此关系可定量表征电磁轨道炮高速滑动接触电阻。实例计算表明,电枢/轨道高速滑动接触电阻的变化依赖于轨道电流变化,对应电流上升段、平顶段和电流下降段。在平顶段接触电阻最小约0.2 m,在电流上升段和电流下降段,接触电阻达3 m。     

二类广义Vandermonde行列式的计算

给出了二类广义Vandermonde行列式计算的显式表示式.     

Differential Expression Analysis of Single-Cell RNA-Seq Data: Current Statistical Approaches and Outstanding Challenges

With the advent of single-cell RNA-sequencing (scRNA-seq), it is possible to measure the expression dynamics of genes at the single-cell level. Through scRNA-seq, a huge amount of expression data for several thousand(s) of genes over million(s) of cells are generated in a single experiment. Differential expression analysis is the primary downstream analysis of such data to identify gene markers for cell type detection and also provide inputs to other secondary analyses. Many statistical approaches for differential expression analysis have been reported in the literature. Therefore, we critically discuss the underlying statistical principles of the approaches and distinctly divide them into six major classes, i.e., generalized linear, generalized additive, Hurdle, mixture models, two-class parametric, and non-parametric approaches. We also succinctly discuss the limitations that are specific to each class of approaches, and how they are addressed by other subsequent classes of approach. A number of challenges are identified in this study that must be addressed to develop the next class of innovative approaches. Furthermore, we also emphasize the methodological challenges involved in differential expression analysis of scRNA-seq data that researchers must address to draw maximum benefit from this recent single-cell technology. This study will serve as a guide to genome researchers and experimental biologists to objectively select options for their analysis.     

牛蛙生长激素基因cDNA克隆及在大肠杆菌中的表达

以成体牛蛙脑垂体总RNA为模板进行RT-PCR,克隆到牛蛙生长激素基因(bullfrog growth hormone, bfGH)cDNA编码序列,其长度为651 bp,编码的前体GH蛋白序列经BLAST分析,与已报道的牛蛙GH蛋白质序列AAB24792、AAB19428、CAA31038的同源性分别为98.1%、96.3%、95.3%,其在Genbank的登录号为AY251538;将bfGH亚克隆到原核表达载体pGEX1-λt构建成牛蛙GH原核表达载体VGBfGH,转化BL21（DE3）E.coli得     

Nano-Structured Ridged Micro-Filaments (≥100 µm Diameter) Produced Using a Single Step Strategy for Improved Bone Cell Adhesion and Proliferation in Textile Scaffolds

Textile scaffolds that are either 2D or 3D with tunable shapes and pore sizes can be made through textile processing (weaving, knitting, braiding, nonwovens) using microfilaments. However, these filaments lack nano-topographical features to improve bone cell adhesion and proliferation. Moreover, the diameter of such filaments should be higher than that used for classical textiles (10–30 µm) to enable adhesion and the efficient spreading of the osteoblast cell (>30 µm diameter). We report, for the first time, the fabrication of biodegradable nanostructured cylindrical PLLA (poly-L-Lactic acid) microfilaments of diameters 100 µm and 230 µm, using a single step melt-spinning process for straightforward integration of nano-scale ridge-like structures oriented in the fiber length direction. Appropriate drawing speed and temperature used during the filament spinning allowed for the creation of instabilities giving rise to nanofibrillar ridges, as observed by AFM (Atomic Force Microscopy). These micro-filaments were hydrophobic, and had reduced crystallinity and mechanical strength, but could still be processed into 2D/3D textile scaffolds of various shapes. Biological tests carried out on the woven scaffolds made from these nano-structured micro filaments showed excellent human bone cell MG 63 adhesion and proliferation, better than on smooth 30 µm- diameter fibers. Elongated filopodia of the osteoblast, intimately anchored to the nano-structured filaments, was observed. The filaments also induced in vitro osteogenic expression, as shown by the expression of osteocalcin and bone sialoprotein after 21 days of culture. This work deals with the fabrication of a new generation of nano-structured micro-filament for use as scaffolds of different shapes suited for bone cell engineering.     

重组枯草芽孢杆菌谷氨酰胺合成酶蛋白在改良M9培养基中的诱导表达

以重组枯草芽孢杆菌谷氨酰胺合成酶(L-谷氨酸:氨连接酶,Glutamine Synthetase, GS EC 6.3.1.2)蛋白表达宿主菌株BL21(DE3) (pET3C/谷氨酰胺合成酶)作为研究对象,借助SDS PAGE分析方法,对于用乳糖诱导由T7lac启动子控制的重组目的产物蛋白的各种基本参数进行了初步的研究.研究了最佳本底培养基、最佳碳源及其最佳添加比例、碳源与诱导物的最适组合,并探索了适用于改良型培养基的诱导参数.实验结果表明,对于重组目的产物蛋白,改良型M9培养基完全可以替代LB培养基;以甘油为碳源,可以避免葡萄糖对T7lac启动子的屏蔽作用.以乳糖为诱导物,目的蛋白的表达量、可溶性及酶活与以IPTG为诱导物基本接近.研究结果为酶法合成谷氨酰胺的工业化生产提供了一定的参考.     

植物4CL基因家族结构功能与表达特性研究进展

4-香豆酸：辅酶A连接酶（4CL）是植物苯丙烷衍生物,如类黄酮和木质素等,生物合成途径的一种关键酶,在大多数维管植物中4CL基因以基因家族的形式出现.4CL基因家族成员在植物组织中存在差异表达,并参与不同的苯丙烷类衍生物的生物合成.从4CL酶的基因结构、基因家族组成与表达特性等方面详细论述了当前最新研究进展,这将有助于更好地理解植物4CL基因参与苯丙烷类衍生物途径的合成与代谢机制.