应用酵母双杂交技术筛选与p53相互作用的蛋白质

应用酵母双杂交技术筛选与p53发生相互作用的蛋白质,有助于进一步阐明其在肿瘤发生、发展中发挥重要作用的调控机制。采用酵母双杂交技术,以p53C末端（62-393aa）作为诱饵筛选人乳腺cDNA文库,寻找能与之相互作用的蛋白质．并运用报告基因等实验提供的信息,经过重复验证排除假阳性以确定最后的阳性克隆。以p53C末端（62～393aa）作为诱饵最终筛选出了一个阳性克隆,经测序及生物信息学分析,这一个阳性克隆为：PIAS3（Protein inhibitor of activated stat3）。说明了PIAS3蛋白能与p53（62-393aa）发生特异性的相互作用。     

The Phosphorus Bond,or the Phosphorus-Centered Pnictogen Bond: The Covalently Bound Phosphorus Atom in Molecular Entities and Crystals as a Pnictogen Bond Donor

The phosphorus bond in chemical systems, which is an inter- or intramolecular noncovalent interaction, occurs when there is evidence of a net attractive interaction between an electrophilic region associated with a covalently or coordinately bonded phosphorus atom in a molecular entity and a nucleophile in another, or the same, molecular entity. It is the second member of the family of pnictogen bonds, formed by the second member of the pnictogen family of the periodic table. In this overview, we provide the reader with a snapshot of the nature, and possible occurrences, of phosphorus-centered pnictogen bonding in illustrative chemical crystal systems drawn from the ICSD (Inorganic Crystal Structure Database) and CSD (Cambridge Structural Database) databases, some of which date back to the latter part of the last century. The illustrative systems discussed are expected to assist as a guide to researchers in rationalizing phosphorus-centered pnictogen bonding in the rational design of molecular complexes, crystals, and materials and their subsequent characterization.     

基于地面激光点云数据的单木三维重建方法

目的 使用地面三维点云数据,提出一种单株树木三维网格模型重建方法,为精准获取测树因子提供技术支撑。 方法 对获取的点云进行预处理,使用k-d树构建近邻关系图,用Dijkstra算法求算出子图的根。检测出有效路径后,使用探测半径计算关键路径。计算树枝骨架,然后对初始骨架进行Bezier曲线半径平滑,得到平滑的骨架,再将骨架连接,使用半径平滑和圆柱拟合减少点云密度小造成的拟合不足的情况,能够最大限度保留树枝的细节。结果 使用3株落叶松点云数据构建了树枝树干表面网格模型,重建了树木三维结构。将树干、树枝的三维网格模型与点云匹配后,效果较好;所构建的模型能够进行细小枝条的重建,而不是模拟细枝,通过观察重建结果,一级枝的重建效果非常好,大的二级枝也能得到很好的展示;整套算法计算快速,计算时间与枝条的复杂程度、连接关系有关。结论 基于关键路径探测的方法能够很好地构建树木的三维网格模型,可以用于单株树木测树因子的精确提取。     

我所经历的5个物理实验

结合亲身经历的5个物理实验,讲解了从事科学研究的独到体会。     

H2S、HCN、PH3在FeO（100）表面吸附的密度泛函理论研究

基于密度泛函理论研究了H2S、HCN、PH3 在FeO(100)表面的吸附行为,其吸附位点主要考虑四个：Fe-top(铁顶位)、O-top(氧顶位)、Hollow(空位)、Bridge(桥位)。结果表明H2S吸附在O-top吸附位点的吸附能最小,为-1.02ev,即在该位点的吸附体系最稳定。当HCN吸附在FeO(100)表面时,各吸附位点的稳定顺序为Hollow>Fe-top>Bridge>O-top。PH3 的最稳定的吸附位点与H2S的一致,为O-top吸附位点,其吸附能为-1.11ev。当H2S吸附在O-top吸附位点时,H2S与FeO（100）表面的电荷转移量最多,说明该吸附构型最稳定,而HCN吸附在FeO(100)表面,在Hollow吸附位点的电荷转移量最多,也即该吸附位点属于最稳定吸附位点。PH3与FeO（100）表面之间的电荷转移量最多的吸附位点与H2S的相同。当H2S和PH3吸附在O-top吸附位点时,吸附后的态密度曲线整体向低能级移动,峰值降低,其吸附结构变得更加稳定。而HCN吸附在Hollow位点时,吸附后的HCN态密度曲线向能量更低的区域移动,吸附体系变得更稳定。     

First Experimental Quantitative Charge Density Studies of Advanced Intermediate of Vitamin D Analogues

Vitamins D are a group of fat-soluble secosteroids which play a regulatory role in the functioning of most cells. Rational design of new vitamin D analogs, of increased therapeutic potency and lowered calcemic side effects, requires high-resolution initial structures and a deep understanding of interactions with the molecular targets. In this paper, using quantum crystallography, we present the first determination of the experimental quantitative charge density of an advanced intermediate of vitamin D analogues as well as a reconstruction of the theoretical electron density of final vitamin D analogues. Application of these methods allows for topological and electrostatic interaction energy analysis. We showed that the A-ring chair conformation has a significant influence on the topological properties of vitamin D compounds. Moreover, the interactions between the CD-ring and side-chain additionally stabilize the crystal structure. These results are supported by our theoretical calculations and previous biological studies.     

新的光散射体系测定蛋白质的研究

以1,6-己二胺二吖啶为荧光探针,建立了一种新的蛋白质共振散射检测体系。实验考察了该吖啶荧光探针的共振散射特征光谱、散射反应稳定性,研究了缓冲介质pH、探针浓度等参数对测定蛋白质的影响。结果表明,当pH 8.9时,1,6-己二胺二吖啶染料的散射波长为470 nm;加入BSA,反应约9 min后,体系光散射强度达到最大并维持稳定,2 h内无明显变化。当1,6-己二胺二吖啶探针(浓度1.00×10-4mol·L-1)用量为3.00 mL时,蛋白质与1,6-己二胺二吖啶的光散射增强作用显著,共振散射强度随着BSA的增加而明显增强,光散射强度与蛋白质浓度成良好线性关系,线性浓度范围为1.00～5.00 μg·mL-1,检测限(3σ/K)为0.085 μg·mL-1。测定了血清样品,浓度为2.00～4.00 μg·mL-1,回收率为98.0%～101.7%,测定偏差小于1.7％。     

The glassy state of the amorphous V2O5–NiO–TeO2 samples

The glass transition temperature dependence to heating rate and therefore the activation energy (ΔH^?) of the glass transition of (60-x)V₂O₅–xNiO–40TeO₂ oxide glasses with 0≤x≤20 (in mol%) were investigated at heating rates φ (=3 6, 9, 10 and 12 K/min) using differential scanning calorimetry (DSC). The heating rate dependence of T_g was used to investigate the applicability of different theoretical models describing the glass transition. Using the application of Moynihan and Kissinger et al. models to the present data, different values of (ΔH^?) at each different heating-rate regions were obtained. The fragility parameter (m=ΔH^?/R T_g) was ∼24.98 for x=10 mol%, suggesting that this glass may be considered as a rather strong glass (fragility index m∼>20 is an indication of fragile glass). Also the compositional dependence of T_g and ΔH^? was investigated.     

Investigation of crystallographic sites of Eu in La2BaZnO5 by site-selective laser-excitation spectroscopy

La₂BaZnO₅:Eu³⁺ (0.05 mol%) was prepared by a solid-state reaction at high temperature. X-ray powder diffraction analysis confirmed the formation of single phase La₂BaZnO₅. Luminescence properties of La₂BaZnO₅:Eu³⁺ are investigated by site-selective laser-excitation and emission spectroscopy at 18 K. Two different crystallographic sites for Eu³⁺ corresponding to the La³⁺ and Ba²⁺ sites are identified from the ⁷F₀→⁵D₀ excitation spectra obtained by monitoring the ⁵D₀→⁷F_J (J=1, 2, …, 6) emissions. It is found that Eu³⁺ substituted for the Ba²⁺ ion experiences stronger crystal-field strength than Eu³⁺ substituted for the La³⁺ ion. Energy transfer between the two crystallographic Eu³⁺ centers is investigated by luminescence decay curves at 18 K.     

Optical and fluorescence spectroscopy of Eu2O3-doped P2O5-K2O-KF-MO-Al2O3 (M = Mg, Sr and Ba) glasses

Fluorophosphate glasses of composition, P₂O₅ + K₂O + KF + MO + Al₂O₃ + xEu₂O₃ (M = Mg, Sr and Ba; x = 0.01, 0.05, 0.1, 1.0, 2.0, 4.0 and 6.0 mol%) were prepared and characterized their optical properties. Crystal-field (CF) analysis revealed a relatively weak CF strength around Eu³⁺ ions in the Ba based fluorophosphate glasses. The Judd-Ofelt parameters have been estimated from the oscillator strengths of ⁷F₀ → ⁵D₂, ⁷F₀ → ⁵D₄ and ⁷F₀ → ⁵L₆ absorption transitions of Eu³⁺ ions and were used to evaluate the radiative properties of the ⁵D₀ → ⁷F_J (J = 0-4) transitions. Considerable variation has been observed in the relative intensity ratio of ⁵D₀ → ⁷F₂ to ⁵D₀ → ⁷F₁ transitions of Eu³⁺ ions due to change in the alkaline earth metal ions. The decay of the ⁵D₀ level shows single exponential and less sensitive to Eu³⁺ ions concentration as well as MgO/SrO/BaO modifiers.