Evaluation of the enantiomeric selectivity in the chiral ligand-exchange chromatography of amino acids by a computational model

The chromatographic resolution of enantiomeric amino acids is accomplished on a reversed phase column using aqueous mobile phase containing the chiral reagent N,N-dimethyl-S-phenylalanine-Cu(II). The separation is a result of the whole interaction between the diastereomeric complex surface and the mixed stationary phase realized by the dynamic coating of the RP-18 carbon chains layer. The elution order seems to be related to the different water coordination capability on copper ion in the formation of the mixed ternary complexes.     

FEW: A workflow tool for free energy calculations of ligand binding

In the later stages of drug design projects, accurately predicting relative binding affinities of chemically similar compounds to a biomolecular target is of utmost importance for making decisions based on the ranking of such compounds. So far, the extensive application of binding free energy approaches has been hampered by the complex and time‐consuming setup of such calculations. We introduce the free energy workflow (FEW) tool that facilitates setup and execution of binding free energy calculations with the AMBER suite for multiple ligands. FEW allows performing free energy calculations according to the implicit solvent molecular mechanics (MM‐PB(GB)SA), the linear interaction energy, and the thermodynamic integration approaches. We describe the tool's architecture and functionality and demonstrate in a show case study on Factor Xa inhibitors that the time needed for the preparation and analysis of free energy calculations is considerably reduced with FEW compared to a fully manual procedure. © 2013 Wiley Periodicals, Inc.     

基于化学核心素养培养的高中有机实验教学

调查发现,当前对高中有机实验教学普遍重视不够,教师缺乏通过有机实验教学培养学生学科核心素养的意识。提出以下建议：深度解读课程标准,增强实验教学意识;发挥实验教学功能,设计课题式探究实验教学;把握有机教学特点,巧设问题探究性实验;培训教师实验技能,加强实验操作能力。     

制备方法对MoO_3／ZrO_2结构的影响及MoO_3／ZrO_2固体超强酸的结构特征 Ⅰ．ZrO_2的形态与样品比表面的研究

ＸＲＤ，ＤＴＡ，比表面测定等结果表明，制备方法对ＭｏＯ３／ＺｒＯ２结构有决定性影响．仲钼酸铵浸渍仅经干燥的Ｚｒ（ＯＨ）４再经高温焙烧所得团体超强酸ＭｏＯ３／ＺｒＯ２（Ⅰ）与浸渍晶态ＺｒＯ２所得部分氧化催化剂ＭｏＯ３／ＺｒＯ２（Ⅱ）的载体形态有明显不同．（１）ＭｏＯ３／ＺｒＯ２（Ⅰ）的比表面数倍于ＭｏＯ３／ＺｒＯ２（Ⅱ）；（２）ＭｏＯ３含量增加时，ＭｏＯ３／ＺｒＯ２（Ⅰ）的比表面逐步增大至一极大值再缓缓下降，而ＭｏＯ３／ＺｒＯ２（Ⅱ）的比表面随ＭｏＯ３含量增加而单调下降；（３）在ＭｏＯ３／ＺｒＯ２（Ⅰ）中，ＺｒＯ２以介稳四方相存在，而在ＭｏＯ３／ＺｒＯ２（Ⅱ）中则是稳定的单斜相．在此基础上研究了事先引入的活性组分在载体织构形成过程中的作用，包括延迟ＺｒＯ２晶化，阻碍晶粒长大及与之相关的相变等，并讨论了ＭｏＯ３／ＺｒＯ２（Ⅰ）中ＭｏＯ３最佳含量的科学含义．     

Effects of Calcination on the Physical and Photocatalytic Properties of TiO<Subscript>2</Subscript> Powders Prepared by Sol–Gel Template Method

TiO₂ powders were prepared by sol–gel template method and calcined under different conditions. XRD, BET and TEM were used to characterize the TiO₂ powders obtained. The photocatalytic activity of TiO₂ was investigated by the degradation of methyl orange. It was found that TiO₂ powder has the highest photocatalytic activity at a calcination temperature of 673 K. The effects of physical properties such as surface area, crystallinity and crystal phase on the photocatalytic activity of TiO₂ were discussed.     

含Co纳米介孔分子筛的制备与表征

用两步水热法合成出了含Co介孔分子筛,采用XRD,FT-IR,TPR,AFM,BET,B JH等方法对样品的物化性能进行了表征.结果表明合成出了纳米级具有介孔结构的CoMCM-41.样品在550℃焙烧可以将模板剂有效去除而不影响孔结构.所得CoMCM-41比表面积大于500 m2/g,平均孔径分布为3.57 nm,粒径分布在20~40 nm范围内.     

Evaluation of the protein solvent-accessible surface using reduced representations in terms of critical points of the electron density

The aim of our study is the development of a method for calculating the interface of dimerization of protein-protein complexes based on simplified medium-resolution structures. In particular, we wished to evaluate if the existing concepts for the computation of the Solvent-Accessible Surface Area (SASA) of macromolecules could be applied to medium-resolution models. Therefore, we selected a set of 140 protein chains and computed their reduced representations by topological analysis of their electron density maps at 2.85 A crystallographic resolution. This procedure leads to a limited number of critical points (CPs) that can be identified and associated to backbone and side-chain parts. To evaluate the SASA and interfaces of dimerization of the reduced representations, we chose and modified two existing programs that calculate the SASA of atomic representations, and tested (1) several radii tables of amino acids, (2) the influence of the backbone and side-chain points, and (3) the radius of the solvent molecule, which rolls over the surface. The results are shown in terms of relative error compared to the values calculated on the corresponding atomic representations of the proteins.     

A New Orthorhombic Phase of ZrW1.6Mo0.4O8 at Ambient Pressure

IntroductionZr W2 O8presents a few models of structures.The first report was made by Graham etal.[1] andconfirmed by Chang et al.[2 ] in the pseudobinaryphase diagram of a Zr O2 - WO3 system atatmospheric pressure.Cubic zirconium tungstate,Zr W2 O8,possesses the acentric P2 13 structure( αform,a=0 .91 5 75 nm at 2 93K) [3 ] and istransformed to the disordered centric Pa3structure(β form,a =0 .91 371 nm,at 483 K) [3 ] .Theprecise transition temperature ofα toβ form is448K determined …