Effects of solute-matrix interaction on monitoring the conformational changes of immobilized proteins by surface plasmon resonance sensor

A real-time and labeling-free surface plasmon resonance (SPR) sensor was used to monitor the conformational changes of immobilized globule proteins (RNase A and lysozyme) in chemical unfolding and refolding. The effects of chemical denaturants on the protein structures were investigated. The methodology in protein conformational study on the solid surface is refined through the theoretic calculations and the conformational information of native/denatured proteins in solution. Additionally, our observation illustrates that the ambient buffer solution is merit to influence the refractive index of immobilized protein films and directly be observed from the SPR resonance angle shifts.     

Correlations between Van der Waals' volume and retention index general equation applicable to different homologous series

Summary Correlations between retention index (R_I) and Van der Waals' volume (V_W) in homologous series of n-alcohols, n-aldehydes and esters are studied on the stationary phases Carbowax 1540 and squalane. Influence of functional groups is quantified and a method for obtaining one general equation, valid for an indeterminate number of homologous series, is proposed.     

Graphs to chemical structures. 4: Combinatorial enumeration of planted three-dimensional trees as stereochemical models of monosubstituted alkanes

Planted three-dimensional (3D) trees, which are defined as a 3D version of planted trees, are enumerated by means of Fujita’s proligand method formulated in Parts 1–3 of this series [Fujita in Theor Chem Acc 113:73–79, 80–86, 2005; Fujita in Theor Chem Acc 115:37–53, 2006]. By starting from the concepts of proligand and promolecule introduced previously [Fujita in Tetrahedron 47:31–46, 1991], a planted promolecule is defined as a 3D object in which the substitution positions of a given 3D skeleton are occupied by a root and proligands. Then, such planted promolecules are introduced as models of planted 3D-trees. Because each of the proligands in a given planted promolecule is regarded as another intermediate planted promolecule in a nested fashion, the given planted promolecule is recursively constructed by a set of such intermediates planted promolecules. The recursive nature of such intermediate planted promolecules is used to derive generating functions for enumerating planted promolecules or planted 3D-trees. The generating functions are based on cycle indices with chirality fittingness (CI-CFs), which are composed of three kinds of sphericity indices (SIs), i.e., a _d for homospheric cycles, c _d for enantiospheric cycles, and b _d for hemispheric cycles. For the purpose of evaluating c _d recursively, the concept of diploid is proposed, where the nested nature of c _d is demonstrated clearly. The SIs are applied to derive functional equations for recursive calculations, i.e., a(x), c(x ²), and b(x). Thereby, planted 3D-trees or equivalently monosubstituted alkanes as stereoisomers are enumerated recursively by counting planted promolecules. The resulting values are collected up to 20 carbon content in a tabular form. Now, the enumeration problem initiated by mathematician Cayley [Philos Mag 47(4):444–446, 1874] has been solved in such a systematic and integrated manner as satisfying both mathematical and chemical requirements.     

Light induced refractive index changes in PMMA films doped with styrene

Solutions of poly(methyl methacrylate) in styrene are used to produce thin polymer films (1m–20m) saturated with styrene monomer. In the illuminated areas refractive index changes up to 10^–2 are achieved by photoinduced polymerisation. The index patterns may be fixed by annealing treatments removing the residual monomer.We thank P. Hertel, M. Kopietz, M. D. Lechner and D. Steinmeier for valuable discussions. Financial support of the Stiftung Volkswagenwerk is gratefully acknowledged.     

烯烃聚合数学模拟研究与现状

综述了近年来国内外在烯烃聚合微观形态和宏观反应器数学模拟方面取得的研究成果，指出了烯烃聚合过程数学模拟的发展方向。     

胺类化合物气相色谱保留指数与结构的相关性研究

应用Ａｍ指数和引力指数Ｇ１对在３种体系下的胺类化合物的气相色谱保留指数和结构进行了相关性研究,并运用最佳子变量集算法和人工神经网法进行了计算分析,在非极性固定相ＯＶ－１０１和极性固定相ＯＶ－２２５和ＮＧＡ下均获得了比较好的相关模型。     

烷基极化效应与X=O键伸缩振动频率

烷基取代物R’X=0的X=0键伸缩振动频率ν与烷基R的极化效应指数PEI(R)的关系可表示为:ν=a bPEI(R)。研究结果表明,烷基的极化效应使X=0键的伸缩振动频率降低。     

烯烃加成反应活性与烷基极化效应的关系

烯烃的自由基加成和亲电加成速率受不同的因素控制.对于仅仅含烷基取代的简单烯烃:(1)与OH自由基加成速率-log kOH可由π键上烷基极化效应指数的几何平均值GMPEIπ关联:-log kOH=a bGMPEIπ c(GMPEIπ)2; (2)与亲电试剂加成速率log k可由π键两端碳原子所连基团极化效应指数PEI(L)和PEI(S)关联:log k=a bPEI(L) cPEI(S),其中的PEI(L)和PEI(S)分别表示极化效应较大和较小的一端.     

离子性指数、极化效应指数烷烃^13C NMR化学位移的 关系研究

定义了烷烃分子中碳原子的离子性指数(INI)，用离子性指数(INI)、极化效应指数(PEI)及N^i~H(i=αβΥ)结构信息参数研究了烷烃的^13CNMR化学位移模型，结果表明，烷烃^13CNMR化学位移(CS)可用下式来定量描述：CS=194.6156-37.7394(INI)+98.6505(ΣPEI)+27.1630(INI/ΣPEI)-652.9106(ΣPEI/INI)+0.7735N^α~H+2.2468N^β~H-0.1742N^γ~H。用上式估算了304个碳原子的化学位移，平均绝对误差仅为0.77δ，标准差0.9860δ，预测值与实验值非常吻合。     

Cooperative rearranging regions in polymeric materials: Relationship with the fragility of glass-forming liquids

From measurements performed on different polymeric glass-forming liquids using differential scanning calorimetry (DSC), we determined the values of the fragility index m according to the concept proposed by Angell. We calculated the average size of a cooperative rearranging region (CRR) at the glass transition i.e. z(T_g), according to the definition proposed by Solunov. This quantity is linked to the Kauzmann temperature which was determined from dielectric spectroscopy or viscosimetry measurements performed on different samples including three-dimensional polymeric networks and linear polymer families with variable lateral chain lengths. By using our experimental data and others collected in the literature in order to scan a large domain of fragility values, we show that the fragility index m, characterising the glass-forming liquid, can be correlated to z(T_g) which characterises the glass formed.