An Iterative Divergent Approach to Conjugated Starburst Borane Dendrimers

Using a new divergent approach, conjugated triarylborane dendrimers were synthesized up to the 2^nd generation. The synthetic strategy consists of three steps: 1) functionalization, via iridium catalyzed C−H borylation; 2) activation, via fluorination of the generated boronate ester with K[HF₂] or [N(nBu₄)][HF₂]; and 3) expansion, via reaction of the trifluoroborate salts with aryl Grignard reagents. The concept was also shown to be viable for a convergent approach. All but one of the conjugated borane dendrimers exhibit multiple, distinct and reversible reduction potentials, making them potentially interesting materials for applications in molecular accumulators. Based on their photophysical properties, the 1^st generation dendrimers exhibit good conjugation over the whole system. However, the conjugation does not increase further upon expansion to the 2^nd generation, but the molar extinction coefficients increase linearly with the number of triarylborane subunits, suggesting a potential application as photonic antennas.     

The influence of high pressure on the structural stability,Vickers hardness and mechanical properties of Re and Ru dodecaborides

We apply the first-principles approach to study the structural stability, Vickers hardness, and elastic modulus of ReB₁₂ and RuB₁₂. In particular, we further investigate the influence of high pressure on the structural stability and mechanical properties of ReB₁₂ and RuB₁₂. The calculated results show that ReB₁₂ and RuB₁₂ are thermodynamic stability under high pressure. Here, ReB₁₂ is more thermodynamic stability than that of the RuB₁₂. The calculated Vickers hardness of ReB₁₂ and RuB₁₂ is 16.25 and 16.55 GPa, respectively. It is found that the calculated elastic constants and elastic modulus of ReB₁₂ and RuB₁₂ increase with increasing pressure. In particular, the calculated elastic constants and elastic modulus of ReB₁₂ are larger than that of the RuB₁₂. The calculated electronic structure shows that the high hardness and elastic modulus of ReB₁₂ and RuB₁₂ are attributed to the 3D network B-B covalent bonds.     

Dynamic and static nature of activated interactions in transition states as elucidated by quantum theory of atoms-in-molecules dual functional analysis: A case of ligand exchange at the N of sulfonylimino-λ3-bromanes

A method to elucidate the dynamic and static natures of the activated interactions in transition states (TSs) is proposed using quantum theory of atoms-in-molecules (QTAIM) dual functional analysis (QTAIM-DFA). The natures are determined for the ligand exchange at the N of sulfonylimino-λ³-bromanes, RBr-*-N(SO₂CF₃)-*-X′R′ (R, R′ = Me or Ph, X′ = Br′ or I′). Asterisks (*) emphasize the presence of bond critical points within the interactions in question. While data from the optimized structures of TSs correspond to the static nature, those from the perturbed and optimized structures represent the dynamic nature. The nature of the interactions in Br-*-N-*-X′ calculated with QTAIM-DFA, using the perturbed structures generated using the normal coordinates for the imaginary frequencies (NIV), was very similar to that in trigonal bipyramidal adduct formation through charge transfer. The results with NIV were precisely the same as those obtained based on intrinsic reaction coordinate (IRC). The high applicability of QTAIM-DFA is demonstrated when analyzing the activated interactions in TSs.     

First principles calculations of oxygen reduction reaction at fuel cell cathodes

The efficiency of solid oxide fuel cells (SOFC) depends critically on materials, in particular for the cathode where the oxygen reduction reaction (ORR) occurs. Typically, mixed conducting perovskite ABO₃-type materials are used for this purpose. The dominating surface terminations are (001) AO and BO₂, with the relative fractions depending on materials composition and ambient conditions.Here, results of recent large-scale first principles (ab initio) calculations for the two alternative polar (La,Sr)O and MnO₂ (001) terminations of (La,Sr)MnO₃ cathode materials are discussed. The surface oxygen vacancy concentration for the (La,Sr)O termination is more than 5 orders of magnitude smaller compared to MnO₂, which leads to drastically decreased estimated ORR rates. Thus, it is predicted for prototypical SOFC cathode materials that the BO₂ termination largely determines the ORR kinetics, although with Sr surface segregation (long-term degradation) its fraction of the total surface area decreases, which slows down cathode kinetics.     

Stabilities,Electronic Structures,and Bonding Properties of Iron Complexes (E1E2)Fe(CO)2(CNArTripp2)2 (E1E2=BF,CO, N2, CN−, or NO+)**

The coordination of 10-electron diatomic ligands (BF, CO N₂) to iron complexes Fe(CO)₂(CNAr^Tripp2)₂ [Ar^Tripp2=2,6-(2,4,6-(iso-propyl)₃C₆H₂)₂C₆H₃] have been realized in experiments very recently (Science, 2019 , 363, 1203–1205). Herein, the stability, electronic structures, and bonding properties of (E₁E₂)Fe-(CO)₂(CNAr^Tripp2)₂ (E₁E₂=BF, CO, N₂, CN⁻, NO⁺) were studied using density functional (DFT) calculations. The ground state of all those molecules is singlet and the calculated geometries are in excellent agreement with the experimental values. The natural bond orbital analysis revealed that Fe is negatively charged while E₁ possesses positive charges. By employing the energy decomposition analysis, the bonding nature of the E₂E₁–Fe(CO)₂(CNAr^Tripp2)₂ bond was disclosed to be the classic dative bond E₂E₁→Fe(CO)₂(CNAr^Tripp2)₂ rather than the electron-sharing double bond. More interestingly, the bonding strength between BF and Fe(CO)₂(CNAr^Tripp2)₂ is much stronger than that between CO (or N₂) and Fe(CO)₂(CNAr^Tripp2)₂, which is ascribed to the better σ-donation and π back-donations. However, the orbital interactions in CN⁻→Fe(CO)₂(CNAr^Tripp2)₂ and NO⁺→Fe(CO)₂(CNAr^Tripp2)₂ mainly come from σ-donation and π back-donation, respectively. The different contributions from σ donation and π donation for different ligands can be well explained by using the energy levels of E₁E₂ and Fe(CO)₂(CNAr^Tripp2)₂ fragments.     

Ensemble Docking Coupled to Linear Interaction Energy Calculations for Identification of Coronavirus Main Protease (3CLpro) Non-Covalent Small-Molecule Inhibitors

SARS-CoV-2, or severe acute respiratory syndrome coronavirus 2, represents a new strain of Coronaviridae. In the closing 2019 to early 2020 months, the virus caused a global pandemic of COVID-19 disease. We performed a virtual screening study in order to identify potential inhibitors of the SARS-CoV-2 main viral protease (3CL^pro or M^pro). For this purpose, we developed a novel approach using ensemble docking high-throughput virtual screening directly coupled with subsequent Linear Interaction Energy (LIE) calculations to maximize the conformational space sampling and to assess the binding affinity of identified inhibitors. A large database of small commercial compounds was prepared, and top-scoring hits were identified with two compounds singled out, namely 1-[(R)-2-(1,3-benzimidazol-2-yl)-1-pyrrolidinyl]-2-(4-methyl-1,4-diazepan-1-yl)-1-ethanone and [({(S)-1-[(1H-indol-2-yl)methyl]-3-pyrrolidinyl}methyl)amino](5-methyl-2H-pyrazol-3-yl)formaldehyde. Moreover, we obtained a favorable binding free energy of the identified compounds, and using contact analysis we confirmed their stable binding modes in the 3CL^pro active site. These compounds will facilitate further 3CL^pro inhibitor design.     

Counter‐Intuitive Gas‐Phase Reactivities of [V2]+ and [V2O]+ towards CO2 Reduction: Insight from Electronic Structure Calculations

[V₂O]⁺ remains “invisible” in the thermal gas‐phase reaction of bare [V₂]⁺ with CO₂ giving rise to [V₂O₂]⁺; this is because the [V₂O]⁺ intermediate is being consumed more than 230 times faster than it is generated. However, the fleeting existence of [V₂O]⁺ and its involvement in the [V₂]⁺ → [V₂O₂]⁺ chemistry are demonstrated by a cross‐over labeling experiment with a 1:1 mixture of C¹⁶O₂/C¹⁸O₂, generating the product ions [V₂¹⁶O₂]⁺, [V₂¹⁶O¹⁸O]⁺, and [V₂¹⁸O₂]⁺ in a 1:2:1 ratio. Density functional theory (DFT) calculations help to understand the remarkable and unexpected reactivity differences of [V₂]⁺ versus [V₂O]⁺ towards CO₂.     

Carbon Dioxide Activation at Metal Centers: Evolution of Charge Transfer from Mg .+ to CO2 in [MgCO2(H2O)n].+, n=0–8

We investigate activation of carbon dioxide by singly charged hydrated magnesium cations Mg ^.+(H₂O)_n, through infrared multiple photon dissociation (IRMPD) spectroscopy combined with quantum chemical calculations. The spectra of [MgCO₂(H₂O)_n]^.+ in the 1250–4000 cm^?1 region show a sharp transition from n=2 to n=3 for the position of the CO₂ antisymmetric stretching mode. This is evidence for the activation of CO₂ via charge transfer from Mg ^.+ to CO₂ for n≥3, while smaller clusters feature linear CO₂ coordinated end‐on to the metal center. Starting with n=5, we see a further conformational change, with CO₂^.? coordination to Mg²⁺ gradually shifting from bidentate to monodentate, consistent with preferential hexa‐coordination of Mg²⁺. Our results reveal in detail how hydration promotes CO₂ activation by charge transfer at metal centers.     

Mass spectrometrical and quantum‐chemical study of pentafluorophenylhydrazones

Twenty‐one pentafluorphenylhydrazones have been analyzed by means of tandem mass spectrometry (ESI MS/MS) conditions to compare their fragmentations with those ones obtained from quantum‐chemical calculations of the hydrazone moiety depending on the substitution from the aldehyde site. The hydrazone N–N bond is disrupted under such conditions, and these results are in accordance with the facts that an electron‐rich particle, such as an anion and or radical in a solution, can cause this disruption and simultaneous defluorination in para‐position of the hydrazone part of the molecule.     

Synthesis and tribological investigation of 4-vinyl guaiacol–based thioether derivatives as multifunctional additives and their interactions with the tribo surface using quantum chemical calculations

Novel 4-vinyl guaiacol based thioether derivatives were synthesized in a three-step reaction procedure by thiol-ene coupling as the key step. The synthesized compounds were characterised by spectroscopic techniques and evaluated for their tribological and antioxidant properties in two different base oils namely epoxy2-ethylhexyl esters of karanja fatty acids (EKE) and dioctyl sebacate (DOS). It was found that the synthesized products were exhibited superior antioxidant performance compared to butylated hydroxytoluene (BHT). All the three synthesized additives were improved the tribological properties of the base oil EKE and DOS. Dithio derivative at 0.75 wt% reduced the wear scar diameter by 36% and at 1 wt% improved the weld point by 33% of base oil EKE. Surface and elemental analysis result suggests that in the tribochemical process the synthesized thioether derivatives decompose and form an effective tribofilms on interacting surfaces. X-ray Photoelectron Spectroscopy (XPS) of the surface lubricated with base oil containing DMFD was evidence for the formation of tribofilm with FeS, FeSO₄ and Fe₂O₃. The antiwear behaviour of the additives was well correlated with quantum chemical calculations. Overall the dithio derivative is more effective as antiwear, extreme pressure and antioxidant bio lubricant additive than other thioether derivatives.