Indirect carbon–carbon spin–spin couplings across one,two and three bonds in pyridine and diazine systems: experiment and theory

An excellent linear correlation is found between a large body of experimental spin–spin carbon–carbon couplings, J(CC), across one, two and three bonds in pyridine and diazine ring systems and the corresponding B3PW91/6‐311++G(d,p)//B3PW91/6‐311++G(d,p) computations. The correlation does not differ significantly from the simplest relationship possible, J(CC)_exp. = J(CC)_calcd., within a small and random spread of about 1 Hz. There are 276 experimental values considered, and 124 out of these are new and come from the present work. The aromatic carbon–carbon couplings vary from ?7.6 through +78.5 Hz. It is shown that the correlation provides a reliable tool for predictions of the signs of aromatic J(CC)'s even if the magnitudes of the latter are of the order of 1 Hz. It is demonstrated, for the first time, that the relatively weak ² J(CC) couplings, in the heteroaromatic systems studied, can bear either sign and span a considerable range of about 11 Hz. The character of the correlation indicates that rovibronic effects on aromatic J(CC)'s and those of nuclear motions on aromatic J(CC)'s are practically negligible. All of this is in a perfect agreement with our recent extensive studies on aromatic J(CC)'s in analogous benzene ring system. Substituent effects on the aromatic J(CC)'s turn out to be significant not only for ¹J(CC)'s but also for most of ³J(CC)'s and ² J(CC)'s, and the computation neatly reciprocates these trends. Copyright © 2008 John Wiley & Sons, Ltd.     

Theoretical Studies on the Fe-M Interactions and 31P NMR in Fe(CO)3(EtPhPpy)2MX2 (X=NCS, SCN, Cl; M=Zn, Cd, Hg)

采用密度泛函理论PBE0方法,计算了单核配合物[Fe(CO)3(EtPhPpy)2] (1)、双核配合物[Fe(CO)3(EtPhPpy)2M(NCS)2] (2:M=Zn,3: M=Cd,4: M=Hg) 和[Fe(CO)3(EtPhPpy)2CdX2] (5:X=Cl,6: X=SCN)的几何构型和电子结构,研究了Fe-M相互作用及其对31P化学位移的影响. 结果表明：配合物的稳定性(S)为S(2)>S(3)>S(4),S(3)≈S(6)>S(5).在[Fe(CO)3(EtPhPpy)2CdX2]体系中,含[SCN]-配合物的稳定性大于含Cl-的. Fe-M相互作用的强度(I )顺序为I (2)≈I (3)相似文献   

乳腺癌组织中蛋白质与核酸分子氢键特征的研究

正常乳腺组织与乳腺癌组织的红外光谱之间存在明显而规律的差异,其中包括蛋白质与核酸等生物分子的氢键缔合方式和程度上的不同。光谱的变化主要表现在：（1）蛋白质的酰胺Ⅰ带,N－H基团和某些氨基酸残基上C－O（H）基团的振动谱带;（2）核酸分子中磷酸二酯的反对称伸缩振动谱带和配对的碱基N－H基团振动等谱带上。氢键是维系和促进蛋白质与核酸高级结构形成的重要作用力,癌变时氢键的变化与癌细胞的特殊生物学行为密切相关,因此有可能利用氢键的这些光谱特征作为乳腺癌诊断和预测癌变可能性的指标。     

μ–H Interaction in Hydrogen Bonding Systems

Muon spin rotation (μSR) experiments were performed on single crystal samples of KH₂PO₄(KDP) and KD₂PO₄(dKDP) to study the dynamics of hydrogen in hydrogen bonding systems. At low temperature, the nuclear dipole interaction of muon and proton was confirmed from the angular dependence of precession frequency of the muon spin under zero magnetic field. The muon occupation site was also determined. A clear change in μSR spectra was observed at the antiferroelectric transition temperature (123 K). At 90 K well below the transition temperature, the muon spin starts to relax, possibly due to muon dynamics. This revised version was published online in September 2006 with corrections to the Cover Date.     

三种二元水溶液体系中氢键对拉曼线宽的影响

采用显微共聚焦拉曼光谱对三种二元水溶液(乙腈/水、二甲基亚砜(DMSO)/水和丙酮/水)进行测量,得到含有氢键作用的水溶液体系拉曼频移和线宽随浓度的变化规律。应用混合模型和相互作用体系的线宽经验公式对实验结果进行了分析。结果表明,含有氢键作用的水溶液体系中,氢键作用越强线宽越大,并且线宽随单位浓度变化率大;同种氢键体系中,线宽不仅受浓度浮动的影响,氢键作用也是一个重要的影响因素,定量分析证明线宽与浓度、氢键作用关系很好地符合Ojha等提出的线宽公式。     

Structural modulation and physical properties of cobalt-doped layered La_2M_5As_3O_2(M=Cu,Ni) compounds

We investigate the structural variation and physical properties of layered La_2M_5As_3O_2(M=Cu,Ni) compound upon Co doping. It is found that the substitution of Co ion just induces the monotonous change of lattice constants without observing the anomalous kink in superconducting La_2(Cu~(1-x)Nix)_5 As_3O_2 solid-solutions. Meanwhile, this doping barely changes As–As bond length in [M_5As_3]~(2-) subunit(±2%), being significantly smaller than 7% shrinkage of that in La_2(Cu~(1-x)Nix)_5 As_3 O_2. Therefore, the doping dependence of crystal structure exhibits similar trend with Ba~(1-x)K_xFe_2 As_2 without the interference of As1–As 2 bonding, implying that the Co substitution for Cu/Ni is hole-doped. In terms of physical property, La2(Cu1-xCox)~5As_3O_2 turns into itinerant ferromagnetic metal, while La2(Ni1-x Cox)5 As3 O2 shows paramagnetism and suppressed structural phase transition upon Co-doping. The distinct structural variation and absence of superconductivity provide important clues to understand the effect of As–As bond in [M_5 As_3]~(2-) subunit.     

丝氨酸蛋白酶中催化三元组内氢键的作用

为了探究丝氨酸蛋白酶催化效率的来源,本文分别研究了丝氨酸酶催化水解多肽CI2、MCTI-A和六肽(SUB)的过程中催化三元组内的氢键所起的作用. 首先采用QM/MM-MD方法计算了在酶-底物复合物和过渡态下组氨酸和天冬氨酸之间质子转移的自由能曲线. 结果表明低能垒氢键仅在CI2酰化反应的过渡态区域形成,而在MCTI-A和SUB酰化反应中均是正常氢键. 与MCTI-A相比,CI2和SUB体系中氢键强度在过渡态时显著增强,因此相应的酰化反应能垒明显降低. 过渡态区域形成的低能垒氢键显然有助于加速酰化反应,同时研究也表明正常氢键也有可能降低能垒. 氢键降低能垒的关键则在于过渡态下氢键强度的增加程度,而不是其是否生成了低能垒氢键. 本文为研究催化三元组间的氢键在丝氨酸蛋白酶中的作用提供了新思路,并有助于理解丝氨酸蛋白酶中催化三元组的催化机制.     

盐酸四环素中可交换氢和氢键的核磁共振波谱研究

四环素类抗生素是一类广谱抗生素,对革兰氏阳性菌、革兰氏阴性菌、支原体、衣原体和立克次体感染均具有抗菌活性.本文运用一维（1D）和二维（2D）核磁共振（NMR）技术对盐酸四环素中可交换氢和氢键进行研究,并将研究结果与RNA和蛋白质结合的四环素以及游离药物的晶体结构进行比较,进一步讨论了药物中的氢键构架与药物活性的相关性.最后对盐酸四环素及其同系物的¹H和¹³C NMR信号进行了全归属和分析,并对文献归属结果进行了细微校正.这些结果有助于进一步探索该类药物在更复杂的生物或环境系统中的构效关系.     

Cellular automata approach to site percolation on ℤ2. A numerical study

We present a cellular automata model as a new approach to Bernoulli site percolation on the square lattice. A new macroscopic quantity is defined and numerically computed at each level step of the automata dynamics. Its limit manifests a critical behavior at a value of the site occupancy probability quite close to those obtained for site percolation on ² with the best-known numerical methods.     

烃类化合物碳氢键解离焓的密度泛函理论研究

通过比较10种密度泛函方法对烃类化合物碳氢键解离焓的计算精度, 发现新型密度泛函BMK方法具有最高的计算精度. 利用该方法计算了包含饱和链烃,、不饱和链烃、脂环烃和芳香烃在内的172个烃类化合物的碳氢键解离焓,计算均方根误差仅为7.95 kJ•mol^－1, 线性拟合常数为0.985. 通过自然键轨道法分析发现, 烃类物质的碳氢键解离焓与母体的碳氢键杂化轨道成分p%, 自由基奇电子轨道杂化成分p%及自由基的自旋密度三个参数之间存在较好的定量关系. 此外, 饱和链烷烃及不饱和链烃的碳氢键解离焓与碳氢键键长之间也存在较好的线性关系.