Test of variational transition state theory with multidimensional tunneling contributions against experimental kinetic isotope effects for the CHnD4−n + OH→P (n=0, 4) reactions

 Variational transition state theory including tunneling corrections (as implemented in Polyrate 8.7) and using multilevel energy calculations at the MCCM-CCSD(T)-1sc level for the CH₄ + OH reaction and at the MCCM-CCSD(T)-2m level for the CD₄ + OH process, reproduces very well the experimental rate constants. However, no single methodology was found that reproduces equally well the experimental rate constants for both title reactions. Received: 24 March 2002 / Accepted: 11 April 2002 / Published online: 4 July 2002     

Spin-adducts of radicals ·P(O)(OPri)2 and ·CMe3 with pyrrolidino[60]fullerenes studied by ESR spectroscopy

The addition of the ^·Bu^t (R¹) and ^·P(O)(OPrⁱ)₂ (R²) radicals to pyrrolidino[60]fullerenes C₆₀CH₂NMeCHX (X = C₆H₄N(CH₂CH₂Cl)₂, 2,6-(Bu^t)₂C₆H₂OH, PhC₆H₄, and indol-3-yl) was studied by ESR spectroscopy. The rate constants of R¹ radical addition to these compounds and dimerization of spin-adducts of the R¹ radicals with pyrrolidino[60]fullerenes were determined. Pyrrolidino[60]fullerenes manifest considerably higher reactivity toward the R¹ radicals than fullerene C₆₀ and methanofullerenes C₆₀CX¹X² (X¹ = X² = CO₂Et; X¹ = CO₂Me, X² = OP(OMe)₂, X¹ = X² = OP(OEt)₂).     

Understanding the conformational dependence of spin-spin coupling constants: through-bond and through-space J(31P,31P) coupling in tetraphosphane-1,4-diides [M(L)x]2[P4R4

The characteristic dependence of J(31P,31P) spin-spin coupling constants of alkali metal tetraphosphane-1,4-diides on structure and composition has been analyzed by density functional methods. The computations confirm that the structure of the contact ion pairs is conserved in solution. Calculations on model systems M2P4H4, on naked P4H4(2-) anions, and on models including point charges, show that the role of the cations is mainly structural and to a smaller extent electrostatic. Three of the four J(P,P) coupling constants depend characteristically on the conformation of the anion, which in turn is determined by the substituents R and by cation-anion interactions. Several couplings exhibit a large through-space component and are thus strongly dependent on the relative orientation of nonbonding electron pairs on the phosphorus atoms involved. This is shown by visualization of coupling pathways using the recently introduced coupling energy density (CED), in combination with the electron localization function (ELF).     

Random walk properties of lattices and correlation factors for diffusion via the vacancy mechanism in crystals

Random walk properties and correlation factors for diffusion via the vacancy mechanism are calculated and compared for various three-dimensional lattices. By applying the theory of random walks on an imperfect lattice, the correlation factor for impurity diffusion is calculated rigorously for the five jump frequency model in the fee lattice.Presented at the Symposium on Random Walks, Gaithersburg, MD, June 1982.     

RATE OF INTRA-MOLECULAR CONTACT FORMATION IN SHORT TWO-DIMENSIONAL COMPACT POLYMERS CHAINS

It is important to know the rate of intra-molecular contact formation in proteins in order to understand how proteins fold clearly. Here we investigate the rate of intra-molecular contact formation in short two-dimensional compact polymer chains by calculating the probability distribution p(r) of end-to-end distance r using the enumeration calculation method and HP model on two-dimensional square lattice. The probability distribution of end-to-end distance p(r) of short two-dimensional compact polymers chains may consist of two parts, i.e. p(r) = p1(r) p2(r), where p1(r) and p2(r) are different for small r. The rate of contact formation decreases monotonically with the number of bonds N, and the rate approximately conforms to the scaling relation of k(N) ∝ N-α. Here the value of α increases with the contact radius a and it also depends on the percentage of H (hydrophobic) residues in the sequences of compact chains and the energy parameters of εHH, εHP and εPP . Some comparisons of theoretical predictions with experimental results are also made. This investigation may help us to understand the protein folding.     

Photochemically induced fluorescence investigation of aβ-cyclodextrin: Azure A inclusion complex and determination of analytical parameters

The photooxidation of Azure A and fluorescence properties of Azure A and its photoproduct have been investigated in aqueous media and in the presence of-cyclodextrin (-CD). The fluorescence intensity of the complex formed between the photoproduct and -CD was found to be three times higher than that of the uncomplexed Azure A photoproduct. A complex formation constant of 110±40 M^–1 was calculated using the Benesi-Hildebrand treatment of the fluorescence emission data. Although the stoichiometry of the Azure A photoproduct: -CD complex was found to be 1: 1, it seems that the Azure A structure is only partially included. Calibration graphs were plotted for the free Azure A photoproduct and the photogenerated product included in -CD. The analytical parameters and quantification limits were determined.     

离子液体的酸性测定及其催化的二苯醚／十二烯烷基化反应

 采用乙腈探针红外光谱法测定了［bmim］Cl／AlCl3类离子液体的酸性．结果表明，乙腈可以区分离子液体的酸类型（Bronsted酸或Lewis酸），同时可以指示离子液体的Lewis酸强度．使用［bmim］Cl／AlCl3类离子液体催化二苯醚与十二烯的烷基化反应，研究了离子液体的酸强度、反应温度和醚烯比对反应的影响，并与AlCl3催化体系进行对比．结果发现，该离子液体对二苯醚与十二烯烷基化反应的催化活性明显高于AlCl3．使用离子液体作催化剂显著提高了烷基化反应的产率，简化了产物的分离与提纯，且对环境友好．当控制反应温度为80℃，原料醚烯摩尔比为7，并采用酸强度适中的离子液体时，目标产物单十二烷基二苯醚的产率接近90％．     

Simultaneous determination of albumin and immunoglobulin G with fluorescence spectroscopy and multivariate calibration

A method is proposed for the simultaneous determination of albumin and immunoglobulin G (IgG1) with fluorescence spectroscopy and multivariate calibration with partial least squares regression (PLS). The influence of some instrumental parameters were investigated with two experimental designs comprising 19 and 11 experiments, respectively. The investigated parameters were excitation and emission slit, detection voltage and scan rate. When a suitable instrumental setting had been found, a minor calibration and test set were analysed and evaluated. Thereafter, a larger calibration of albumin and IgG1 was made out of 26 samples (0-42 μg ml⁻¹ albumin and 0-12.7 μg ml⁻¹ IgG1). This calibration was validated with a test set consisting of 14 samples in the same concentration range. The precision of the method was estimated by analysing two test set samples for six times each. The scan modes tested were emission scan and synchronous scan Δ60 nm. The results showed that the method could be used for determination of albumin and IgG1 (albumin, root mean square error of prediction (RMSEP) <2, relative standard error of prediction (RSEP) <6% and IgG1, RMSEP <1, RSEP <8%) in spite of the overlapping fluorescence of the two compounds. The estimated precision was relative standard deviation (R.S.D.) <1.7%. The method was finally applied for the analysis of some sample fractions from an albumin standard used in affinity chromatography.     

Ultra-slow Relaxation Dynamics in Triglycine Sulfate and D-Sorbitol Studied by Time-resolved Spectroscopy

The ultra-slow modes with a relaxation time much longer than 1 ns are discovered by a time-resolved spectroscopy in uniaxial ferroelectric (NH₂CH₂COOH)₃H₂SO₄ (TGS) and in glass-former HOCH₂(CHOH)₄CH₂OH (D-sorbitol). A mode discovered in TGS is a thermal relaxational mode and is proved to be the physical origin of the central peak found by Brillouin scattering. Two modes are discovered in D-sorbitol. One is a thermal relaxational mode. The other is a mode characterized by the Kohlraush-Williams-Watts function with a relaxation time _R. A remarkable result is that _R indicates a critical behavior not at the liquid-glass transition temperature T_g =–7°C but at the ergodic to nonergodic transition temperature T_c=33°C.This revised version was published online in November 2005 with corrections to the Cover Date.