DFT study and Monte Carlo simulation on proton transfers of 2-amino-2-oxazoline, 2-amino-2-thiazoline, and 2-amino-2-imidazoline in the gas phase and in water

Density functional theory (DFT) and Monte Carlo (MC) simulation with free energy perturbation (FEP) techniques have been used to study the tautomeric proton transfer reaction of 2-amino-2-oxazoline, 2-amino-2-thiazoline, and 2-amino-2-imidazoline in the gas phase and in water. Two reaction pathways were considered: the direct and water-assisted transfers. The optimized structures and thermodynamic properties of stationary points for the title reaction system in the gas phase were calculated at the B3LYP/6-311+G(d, p) level of theory. The potential energy profiles along the minimum energy path in the gas phase and in water were obtained. The study of the solvent effect of water on the proton transfer of 2-amino-2-oxozoline, 2-amino-2-thiazoline, and 2-amino-2-imidazoline indicates that water as a solvent is favorable for the water-assisted process and slows down the rate of the direct transfer pathway.     

2-(4-氯苯基)-3-甲基丁酸的消旋

以酸酐及有机惰性溶剂作混合溶剂，少量叔胺等作催化剂，2-(4-氯苯基)-3-甲基丁酸能在比较温和的条件下基本完全消旋，收率接近90％。     

Chemoenzymatic Synthesis of Cellular Adhesion Tripeptide RGD Precursor in Organic Media

IntroductionA characteristic tripeptide sequence Arg-Gly-Asp(RGD) that is found within fibronectin and other rela-ted adhesion molecules in extracellular matrices(ECM)has received considerable attention from researcherssince it was proved to be a recognit…     

Determination of thermodynamic properties of macroporous glycidyl methacrylate‐based copolymers by inverse gas chromatography

Macroporous crosslinked poly(glycidyl methacrylate‐co‐ethylene glycol dimethacrylate) (PGME) was synthesized by suspension copolymerization and modified by ring‐opening reaction of the pendant epoxy groups with ethylene diamine (EDA). Inverse gas chromatography (IGC) at infinite dilution was applied to determine the thermodynamic interactions of PGME and modified copolymer, PGME‐en. The specific surface areas of the initial and modified copolymer samples were determined by the BET method, from low‐temperature nitrogen adsorption isotherms. The specific retention volumes, V, of 10 organic compounds of different chemical nature and polarity (nonpolar, donor, or acceptor) were determined in the temperature range 333–413 K. The weight fraction activity coefficients of test sorbates, , and Flory–Huggins interaction parameters, , were calculated and discussed in terms of interactions of sorbates with PGME and PGME‐en. Also, the partial molar free energy, , partial molar heat of mixing, , sorption molar free energy, ΔG, sorption enthalpy ΔH, and sorption entropy, ΔS, were calculated. Glass transitions in PGME and PGME‐en, determined from IGC data, were observed in the temperature range 373–393 K and 363–373 K, respectively. © 2005 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 43: 2524–2533, 2005     

The Menshutkin Reaction in the Gas Phase and in Aqueous Solution: A Valence Bond Study

The recently developed (L. Song, W. Wu, Q. Zhang, S. Shaik, J. Phys. Chem. A 2004 , 108, 6017–6024) valence bond method coupled to a polarized continuum model (VBPCM) is applied to the Menshutkin reaction, NH₃+CH₃Cl→CH₃NH₃⁺+Cl^?, in the gas phase and in aqueous solution. The computed barriers and reaction energies at the level of the breathing orbital VB method (P. C. Hiberty, J. P. Flament, E. Noizet, Chem. Phys. Lett. 1992 , 189, 259), BOVB and VBPCM//BOVB, are comparable to CCSD(T) and CCSD(T)//PCM results and to experimental values in solution. The gas‐phase reaction is endothermic and leads to an ion‐pair complex via a late transition state. By contrast, the reaction in the aqueous phase is exothermic and leads to separate solvated ions as reaction products, via an early transition state. The VB calculations provide also the reactivity parameters needed to apply the valence bond state correlation diagram method, VBSCD (S. Shaik, A. Shurki, Angew. Chem. Int. Ed. 1999 , 38, 586). It is shown that the reactivity parameters along with their semiempirical derivations provide together a satisfactory qualitative and quantitative account of the barriers.     

Bismuth triflate catalyzed Claisen rearrangement of allyl naphthyl ethers

Bismuth triflate was found to be an efficient catalyst for the Claisen rearrangement of allyl naphthyl ethers. The reaction proceeds smoothly with a catalytic amount of bismuth triflate (20 mol %) to afford the corresponding ortho-allyl naphthol in moderate to good yields in most cases.     

Speciation analysis of selenium enriched green onions (Allium fistulosum) by HPLC-ICP-MS

Green onions (Allium fistulosum) enriched with 10 or 100 μg mL^− 1 Se(IV) or SeMet were analyzed for total selenium and species distribution. Anion and cation exchange chromatographies were applied for the separation of selenium species with mass spectrometric detection. Two different sample preparation methods (NaOH and enzymatic) were compared from the Se extraction efficiency point of view. Total selenium concentration accumulated by the onions reached the 200 μg g^− 1 level expressed for dry weight when applying SeMet at a concentration of 100 μg mL^− 1 as the source of Se. Speciation studies revealed that both in onion bulbs and leaves the predominant form of organic selenium is Se-methyl-selenocysteine (MeSeCys). When Se(IV) was applied for Se-enrichment at a concentration level of 100 μg mL^− 1 both onion leaf and bulb contained a significant amount of inorganic selenium. An unknown compound was also detected.     

Determination of methylated dibenzothiophenes in environmental sarnples by on-line HPLC-CGC

Concurrent solvent evaporation with a loop-type interface was used for on-line HPLC-CGC in the analysis of methylated dibenzothiophene (DBT) isomers in oil samples. The chromatographic behavior of 20 methyl DBT's was studied by HPLC on an aminopropylsilane DBTA phase and by GC on a selective methyl-phenylsilicone phase. That provided a method for analyzing by GC-flame photometric detection, the individual components of the DBT family, previously picked out of the crude oil matrix by HPLC. The GC oven temperature was shown to be critical during HPLC eluent introduction into the GC pre-column. Too high a temperature induced a severe broadening of early eluted peaks whereas a temperature too close to the boiling point of the liquid at the inlet pressure induced double peaks. Optimized conditions were retained on this basis and may be used for the analysis of other families of polyaromatic hydrocarbons.     

H2O−D2O solvent isotope effect in the volume behavior of some high-charge high-size electrolytes

The apparent molar volumes V of KCl, BaCl₂, K₂SO₄, LaCl₃, Co(en)₃Cl₃ [Tris(ethylenediamine)cobalt(III) chloride], K₃Co(CN)₆, K₃Fe(CN)₆, K₄Fe(CN)₆, and Ba₃[Co(CN)₆]₂ have been determined at 25°C in both light and heavy water. The V values in D₂O are systematically lower and increase more rapidly with salt concentration than the V in H₂O. The volume of transfer from H₂O to D₂O as well as the partial molar volume at infinite dilution in both solvents have also been calculated. These results together with literature values for other electrolytes were used to estimate both of these quantities for D₂O solutions of individual ions. The predictions of ion hydration models and ion-ion interactions are compared with experimental observations.