The Host-Guest Chemistry of Proflavine with Cucurbit[6,7,8]urils

The binding of the polyaromatic guest, 3,6-diaminoacridine (Proflavine) to cucurbit[n]uril (CB[n]) where n = 6, 7 and 8 has been studied by fluorescence spectrophotometry and binding constants determined using a least squares fitting method. Titration of CB[8] into a solution of Proflavine results in a 95% decrease in fluorescence up to a CB[8] to Proflavine ratio of 2:1. From the induced fluorescence spectra a binding constant of 1.9 × 10⁷ M^? 1 was determined. When Proflavine is titrated into a solution of CB[8] a similar binding constant is calculated (1.3 × 10⁷ M^? 1). Titration of CB[6] into a solution of Proflavine yields a decrease in fluorescence of 18–20%, but no binding is observed beyond what is seen within experimental error. Finally, titration of CB[7] into a solution of Proflavine results in an increase in fluorescence (32%) and a blue-shift of the emission wavelength from 509 nm to 485 nm. From the induced fluorescence spectra a binding constant of 1.65 × 10⁷ M^? 1 was determined. From ¹H NMR it appears that the decrease in fluorescence for Proflavine with CB[6] and CB[8] is due to collisional quenching, whereas the increase in fluorescence with CB[7] may be due to rotational restriction.     

Spectrophotometric studies on the interactions of C.I. Basic Red 9 and C.I. Acid Blue 25 with hexadecyltrimethylammonium bromide in cationic surfactant micelles

Interactions between cationic dye-cationic surfactant and anionic dye-cationic surfactant systems were investigated in aqueous solutions using spectrophotometric method at 288.15, 298.15, 308.15 and 318.15 K. C.I. Basic Red 9 (BR9) and C.I. Acid Blue 25 (AB25) were used as cationic and anionic dyes, respectively, and hexadecyltrimethylammonium bromide (HDTMABr) was selected as cationic surfactant in this study. Although there was an interaction between the AB25 and the HDTMABr molecules, an interaction between the BR9 and HDTMABr did not occur due to the electrostatic repulsion forces. Binding constants and partition coefficients between the micellar and the bulk water phases for the AB25-HDTMABr system were calculated from the changes in absorbance values and the critical micelle concentrations at different temperatures. It was found that the values of binding constant and partition coefficient decreased with increasing temperature. Thermodynamic parameters (ΔG⁰, ΔH⁰ and ΔS⁰) were determined for the binding and partition processes of AB25-HDTMABr system. It was concluded from ΔG⁰ values that the binding of AB25 to HDTMABr occurred spontaneously. In addition, the binding and partition processes were exothermic.     

Preparation and characterization of novel molecularly imprinted polymers based on thiourea receptors for nitrocompounds recognition

Molecularly imprinted polymers (MIPs) for the recognition of nitro derivatives are prepared from three different (thio)urea-bearing functional monomers. The binding capability of the polymers is characterized by a batch binding experiment. The imprinting factors and affinity constants (K) of the imprinted polymers exhibit the same tendency as the binding constants (K_a) of the functional monomers to the target substance in solution. Not only nitrofurantoin is efficiently bound by these MIPs but also a broad spectrum of other nitro compounds is bound with at the intermediate level, addressing that these (thio)urea-based monomers can be utilized to prepare a family of MIPs for various nitro compounds, which can be applied as recognition elements in separation and analytical application.     

牛血清白蛋白与十二烷基硫酸钠作用的机理

利用电动势法得到了牛血清白蛋白(BSA)与十二烷基硫酸钠(SDS)相互作用的结合等温线. 通过四阶导数紫外光谱法和荧光光谱法研究了相互作用过程中芳香族氨基酸残基微环境极性的变化. 通过研究发现, 随着SDS浓度的逐渐增大, SDS在BSA上的平均结合数(v)逐渐增大, 色氨酸(Trp)残基所处微环境的极性在减弱后保持基本不变, 酪氨酸残基所处微环境的极性在明显增强后稍有减弱, 苯丙氨酸残基所处微环境的极性略有增强. 结果表明, 当v由0增大到14时, SDS主要结合在BSA的Trp-213附近并逐渐形成聚集体, 从而诱导BSA由结构域ⅡA 开始逐渐展开. 此后, SDS呈正协同作用的特点与BSA 结合, v急剧增大. 当v约为302 时, SDS在BSA上的结合基本达到饱和, BSA的构象趋于稳定.     

铜镁铝三元水滑石的姜-泰勒效应

采用密度泛函理论(DFT),用CASTEP程序模块,对类水滑石(CuxMg3-xAl-LDHs,x=0-3)周期性模型进行几何全优化,通过分析各体系的结构参数、电子排布、氢键、Mulliken电荷布居、结合能,总结出体系中的姜-泰勒效应和结构稳定性规律.结果表明,姜-泰勒效应不仅存在于d轨道未排满的Cu2+中,在p轨道未排满的Mg2+中也可能存在,且未饱和的d、p轨道共同影响着金属离子姜-泰勒畸变的大小.在CuxMg3-xAl-LDHs(x=0-3)中,铝八面体和镁八面体分别以稳定的拉长的八面体形式存在.而随着Cu2+的增加,铜八面体逐渐从压扁的八面体向稳定的拉长的八面体形式转变,体系获得了逐渐增多的姜-泰勒稳定化能.总体上,随着Cu2+的增加,体系中姜-泰勒效应导致的畸变使主客体间的氢键和静电作用力均有减弱趋势,且体系的结合能绝对值逐渐减小,故体系稳定性下降.这有助于从理论上进一步认识含铜水滑石的姜-泰勒效应.     

基于结合位点的辅酶A结合蛋白家族的分类

发展了一种基于分子相互识别的蛋白质分类方法, 应用数据挖掘策略与统计学聚类, 根据辅酶A (coenzyme-A, CoA)结合蛋白的结合模式特征数据, 通过对比和分析多种分类方法对该体系的分类准确度, 对这类体内重要的蛋白进行了分类方法学研究, 选择了最优的两步聚类法. 本研究工作设计和建立了一个分类参数, 可以简洁有效地评价出各个结合特征的显著性与重要性, 并以此为依据从所有特征中筛选出决定性的特征变量. 研究结果所得到的CoA结合蛋白的三个分类, 都具有显著的氢键与疏水结合特征; CoA可以与多个生物活性关键氨基酸残基形成氢键作用. 这些相互作用的共性及分类上的差异, 说明了配体与不同受体相互作用过程中结合模式上的细微差别, 对于以CoA结合蛋白为靶点的选择性调控分子设计具有重要的参考意义与指导作用.     

A thermodynamic investigation on the binding of mercury ion with myelin basic protein at different temperatures

A thermodynamic study on the interaction of myelin basic protein with mercury ion was studied by using isothermal titration calonmetry,ITC,at 300.15,310.15 and 320.15 K in Tris buffer solution at pH 7.The enthalpies of MBP + Hg²⁺ interaction are reported and analysed in terms of the extended solvation model.It was found that MBP has two identical and non-cooperative binding sites for Hg²⁺ ions.The intrinsic dissociation equilibrium constants are 99.904,112.968 and 126.724μmol/L,and the molar enthalpy of binding are -11.634,-10.768 and -10.117kJ mol^-1 at 300.15,310.15 and 320.15 K,respectively.     

Bound-state calculations of the three-dimensional Yakubovsky equations with the inclusion of three-body forces

The four-body Yakubovsky equations in a three-dimensional approach with the inclusion of the three-body forces are proposed. The four-body bound state with two- and three-body interactions is formulated in the three-dimensional approach for identical particles as a function of vector Jacobi momenta, specifically, the magnitudes of the momenta and the angles between them. The modified three-dimensional Yakubovsky integral equations are successfully solved with the scalar two-meson exchange three-body force, where the Malfliet-Tjon-type two-body force is implemented. The three-body force effects on the energy eigenvalue and the four-body wave function, as well as accuracy of our numerical calculations are presented.     

Rashba spin-orbit splitting energy of a pressure induced hydrogenic donor impurity in a corrugated quantum well

Pressure induced hydrogenic donor impurity of ground and excited state in a GaAlAs/GaAs/GaAlAs corrugated quantum well is investigated. The calculations have been carried out using variational technique within the single band effective mass approximation taking into account the anisotropy and the corrections due to the conduction band nonparabolicity. The energy dependent effective mass and the position dependent quantity (Rashba spin-orbit splitting energy) are introduced to obtain the binding energy as a function of well width in the influence of pressure. The obtained results are compared with the other existing literature available.     

聚乙烯亚胺对人血清白蛋白的构象和结合能力的影响

为了解基因载体材料聚乙烯亚胺（PEI）细胞毒性的分子作用机理,本文应用吸收光谱、荧光光谱、圆二色谱、动态光散射和zeta-电位测定分析平均相对分子量为1.8和25 kDa的PEI（记为PEI1.8k和PEI25k）对人血清白蛋白（HSA）构象的影响,同时以8-苯氨基萘-1-磺酸镁（ANS）和槲皮素为模型化合物,了解PEI对HSA结合能力的影响及机理。结果发现,PEI与HSA结合形成静态复合物,导致HSA流体动力学直径变小和分子内环境疏水性增强。PEI1.8k和低浓度的PEI25k引起HSA的a-螺旋结构增加,但是高浓度的PEI25k对HSA二级结构具有稳定作用。PEI对HSA结合能力的影响主要归因于PEI的竞争结合和PEI与HSA结合引起的蛋白质构象变化。PEI的竞争结合降低了HSA对ANS和槲皮素的结合效率,但是蛋白质的构象变化增强了HSA与ANS和槲皮素的结合能力。PEI与HSA的相互作用具有明显的分子尺寸效应,增加PEI的相对分子量可以增强对HSA构象和结合能力的影响。