Effects of Halogen Substitution on Naphthazarin Tautomerism in the Ground and Excited States

5,8-Hihydroxyl-1,4-naphthazarin was taken as a model compound to explore the effect of halogen substitution on intramolecular proton transfer process. Calculations indicate that the substitution in the R2- and R4-positions far away from the active region has much weaker influence on the IPT process than that in the R1-and R3-positions. IPT barriers for substitution in the R1-position are higher than that of parent molecule. However, it is quite reverse for substitution in the R3-position. The IPT process is a proton transfer process coupled with charge separation and coulombic interaction would be dominant during this process. As for naphthazarin, halogen substitution would decrease the quantum yields of O2 but increase those of 1O2.     

Gas‐phase functionalized carbon‐carbon coupling reactions catalyzed by Ni (II) complexes

Gas‐phase C―C coupling reactions mediated by Ni (II) complexes were studied using a linear quadrupole ion trap mass spectrometer. Ternary nickel cationic carboxylate complexes, [(phen)Ni (OOCR¹)]⁺ (where phen = 1,10‐phenanthroline), were formed by electrospray ionization. Upon collision‐induced dissociation (CID), they extrude CO₂ forming the organometallic cation [(phen)Ni(R¹)]⁺, which undergoes gas‐phase ion‐molecule reactions (IMR) with acetate esters CH₃COOR² to yield the acetate complex [(phen)Ni (OOCCH₃)]⁺ and a C―C coupling product R¹‐R². These Ni(II)/phenanthroline‐mediated coupling reactions can be performed with a variety of carbon substituents R¹ and R² (sp³, sp², or aromatic), some of them functionalized. Reaction rates do not seem to be strongly dependent on the nature of the substituents, as sp³‐sp³ or sp²‐sp² coupling reactions proceed rapidly. Experimental results are supported by density functional theory calculations, which provide insights into the energetics associated with the C―C bond coupling step.     

NMR studies on solid cyclohexaamylose inclusion compounds

Orthorhombic inclusion compounds of cyclohexaamylose with methanol,n-propanol, acetic acid and water as guest molecules were studied using¹³C and²H NMR techniques.¹³C chemical shifts were correlated with structural data, whereas²H NMR lineshapes were used to derive information on guest molecule motions.Issued as NRCC No. 25568. Presented in part at the 2nd International Symposium on Clathrate Compounds and Molecular Inclusion Phenomena, Parma, Italy, 30 Aug.–3 Sept. 1982     

Comparison between ab Initio and Modified INDO-MO Calculations of N20

Both STO-3G ab initio and s-p separation-type-modified INDO semiempirical methods were applied to molecular-orbital calculation of the N₂₀ molecule. From these two methods, the optimized bond distances between the nearest N atoms (d_n-n) and the most calculated thermodynamic data are close to each other. The positive values of ΔH_a° and ΔG_a° for the atomization reaction in this work prove that N₂₀ is stable. In contrast to conventional INDO and MINDO/3, but similar to former AMI and MNDO calculations, both ΔH_r° and ΔG_r° are positive in the formation reaction, which indicates that N₂₀ belongs to the category of high-energy molecules.     

Thiacalix[4]arene derivatives with proximally bridged lower rim

New types of lower rim proximally bridged thiacalix[4]arenes have been prepared by direct aminolysis of starting tetraacetate derivative in the cone conformation using aliphatic α,ω-diamines. X-ray crystallography revealed the highly preorganized array of -C(O)NH- bonds resulting in strong intramolecular hydrogen bonding between amide groups of both bridges. The length of the corresponding diamine was found to have an essential influence on the yield of these bridged molecules.     

Gas-phase reactivity of the O=P(OCH3)2+ phosphonium ion with aliphatic esters in a quadrupole ion trap. Spontaneous elimination of ketenes

Ion-molecule reactions between the O=P(OCH(3))(2) (+) phosphonium ions and five aliphatic esters (methyl acetate, methyl propionate, methyl 2-methylpropionate, methyl butyrate and ethyl acetate) were performed in a quadrupole ion trap mass spectrometer. The O=P(OCH(3))(2) (+) phosphonium ions, formed by electron ionization from neutral trimethyl phosphite, were found to react with aliphatic esters to give an adduct ion [RR'CHCOOR", O=P(OCH(3))(2)](+), which loses spontaneously a molecule of ketene CH(2)=CO or substituted ketenes RR'C=CO. Isotope-labeled methyl acetate was used to elucidate fragmentation mechanisms. The potential energy surface obtained from B3LYP/6-31G(d,p) calculations for the reaction between O=P(OCH(3))(2) (+) and methyl acetate is described.     

Three-dimensional quantum dynamics study of vibrational predissociation of HeI_2 van der Waals molecule for low vibrational excitation using the time-dependent wave packet method

Three-dimensional quantum mechanical calculations for vibrational predissociation of HeI2(B) van der Waals molecules are presented using the time-dependent wave packet technique within the golden rule approxima tion.The total and partial decay widths,lifetimes,rates and their dependence on initial vibrational states were obtained for HeI2 at low initial vibrational excited levels.Our calculations show that the calculated tota decay widths,lifetimes and rates agree well with those extrapolated from experimental data available The predicted total decay widths as a function of initial vibrational states exhibit highly nonlinear behavior.The very short propagation time (less.than 1 ps) required in the golden rule wave packet calculation is determined by the duration time of the final state inter-action between the fragments on the vibrationally deexcited adiabatic potential surface.The final state interaction between the fragments is shown to play an important role in determining the final rotational distri     

Facial selectivity of the (R)-1,3-dimethyl-1-cyclohexyl cation in the gas phase

The model reaction between the (R)-1,3-dimethyl-1-cyclohexyl cation (I) and methanol has been investigated under gas-phase radiolytic conditions (750 Torr; 25-120 degrees C) with the aim of evaluating the intrinsic factors that govern the facial selectivity of biased carbocations. The peculiarity of the experimental approach allows the formation of different CH(3) (18)OH.I ionic adducts. Subsequent conversion of these adducts to give the corresponding E/Z covalent products follows different reaction coordinates, which are characterized by their own activation parameters. On the grounds of density functional theory (DFT) results, several [CH(3)OH.I] structures have been located on the relevant potential-energy surface (PES). The experimental results point to a gas-phase facial selectivity, which is mainly governed by entropic factors that arise as a result of the occurrence of different noncovalent ion-molecule "facial adducts" (FA). The formation of FAs may also play an important role in both the reaction dynamics and the positional selectivity. The present results cannot be interpreted by any of the models based on solution-phase experiments.     

Extraction of kinetic information from single-molecule experiments.

We discuss two possible approaches for extracting kinetic information from single-molecule experiments. The first approach is based on computing correlation functions from measured fluorescence signals, and the second on studying the statistics of on and off times of the same fluorescence signal. We show that in both cases it is possible to extract kinetic information about the nature of intramolecular fluctuations of the single molecule. We show that for single-molecule kinetics the intramolecular fluctuations produce stochastic memory effects which lead to new dynamic features that do not exist in traditional chemical kinetics. In particular, we investigate a new type of chemical oscillations in correlation functions observed experimentally by Edman and Rigler (Proc. Natl. Acad. Sci. USA 2000, 97, 8266).     

Diffusion Monte Carlo study of correlation in the hydrogen molecule

The diffusion Monte Carlo (DMC) method shows that correlation in H₂ produces a set of three spatial changes: (i) an enhancement in the electron density distribution n( r ) in the left and right anti‐binding regions that include separately the immediate vicinity of each of the two nuclei, (ii) a reduction in n( r ) in the binding region intervening between the two nuclei as a counterbalance, and (iii) a concomitant increase in the equilibrium internuclear separation. It is stressed that the correlation energy E^c (= T^c + V^c) for diatomic molecules be defined by the difference in the total energy between the exact and the Hartree–Fock (HF) variational calculations that are performed at individually optimized internuclear separations. It is this definition that makes it possible to involve a significant contribution from a correlation‐induced change in the equilibrium internuclear separation as part of the correlation energy and to relate (i) and (ii) to (iii) in consistency with the electrostatic theorem. The present calculations fulfill the virial theorem to an accuracy of ?V/T = 2.00 for DMC and ?V^HF/T^HF = 2.000 for HF. The present correlation energy E^c = ?0.0408 hartree is not only in good agreement with the most accurate value previously reported, but also can be analyzed into all its components in accordance with the correlational virial theorem 2T^c + V^c = 0. © 2006 Wiley Periodicals, Inc. Int J Quantum Chem, 2007