Roe‐type Riemann solvers for general hyperbolic systems

We present a Roe‐type weak formulation Riemann solver where the average coefficient matrix is computed numerically. The novelty of this approach is that it is general enough that can be applied to any hyperbolic system while retaining the accuracy of the original Roe solver. We show applications to the compressible Euler equations with general equation of state. An alternative version of the method uses directly the eigenvectors in the averaging process, simplifying the algorithm. These new solvers are applied in conservative and path‐conservative schemes with high‐order accuracy and on unstructured meshes. Copyright © 2014 John Wiley & Sons, Ltd.     

Explanation of Theoretical Mechanism of Isomerization of L-Alanine Conformation for Experimental Results

B3LYP/6-31＋＋G＊＊ method was applied to investigate the mechanism of alanine isomerization.12 minima and 22 transition states were obtained after optimization and several paths of isomerization were found.It is found that intramolecular single-bond rotation and proton transfer might lead to isomerization.The energy barrier of C–N bond rotation was lower than 2.52 kcal·mol 1,while the energy barrier ranges of the rotation of C–C and C–O were separately 0.43~ 7.01 and 4.69~12.19 kcal·mol 1,and the minimum energy barrier of proton transfer was 30.76 kcal·mol 1.The most probable isomerization path and mechanism for the two most stable conformations was discussed to find that the highest energy barrier to be crossed in this path was 11.87 kcal·mol 1.In order to understand the microscopic nature why only 4 conformations were detected in the experiment,thermodynamic properties of all conformations at the experimental temperature of 391 K was calculated.It is found that conformations XII,XI,X and IX can only unidirectionally convert into conformations rapidly with low energy and vanish immediately.The other conformations were distributed according to Maxwell-Boltzman＇s law,and the distribution probabilities of conformations I,II,III,IV,V,VI,VII and VIII were respectively 27.2%,26.5%,25.8%,6.4%,5.2%,4.8%,2.5% and 1.6%.Conformations I,II and III with bigger probability and stronger absorption peak were easy to detect in the experiment.Conformation IV had a relatively smaller probability（6.4%） and weak absorption peak which,however,could also be identified.The other conformations had too small probability to identify in the spectrum.     

室内环境中脑控轮椅的路径跟踪控制

为了实现室内环境中脑控轮椅的自主导航,提出了一种简单有效的路径跟踪控制方法。给定的路径通常被表示为一系列离散点,根据这一特点,提出了分段直线路径跟踪方法,即依次跟踪由前后两个路径点构成的直线路径到达目标点。基于预瞄点技术并结合模糊算法和传统的PID控制方法设计控制器,完成各分段直线路径的跟踪,并给出了有效的切换条件。实验结果表明,本文提出的路径跟踪控制方法能够使脑控轮椅在室内环境中精确地跟踪给定路径。     

Optical constants of organic insulators in the UV range extracted from reflection electron energy loss spectra

Reflection electron energy loss spectroscopy (REELS) spectra were measured for seven insulating organic compounds (DNA, Irganox 1010, Kapton, polyethylene [PE], poly(methyl methacrylate) [PMMA], polystyrene [PS] and polytetrafluoroethylene [PTFE]). Optical constants and energy band gaps were extracted from the measured REELS spectra after elimination of multiple electron scattering via a deconvolution and fitting the normalised single scattering energy loss spectra to Drude and Drude–Lindhard model dielectric functions, constrained by the Kramers–Kronig sum and f-sum rules. Satisfactory agreement is found for those optical constants for which literature data exists. For PTFE, the observed features in the optical data correspond to its electronic structure.     

Detecting functional connectivity in the resting brain: a comparison between ICA and CCA

Independent component analysis (ICA) and cross-correlation analysis (CCA) are general tools for detecting resting-state functional connectivity. In this study, we jointly evaluated these two approaches based on simulated data and in vivo functional magnetic resonance imaging data acquired from 10 resting healthy subjects. The influence of the number of independent components (maps) on the results of ICA was investigated. The influence of the selection of the seeds on the results of CCA was also examined. Our results reveal that significant differences between these two approaches exist. The performance of ICA is superior as compared with that of CCA; in addition, the performance of ICA is not significantly affected by structured noise over a relatively large range. The results of ICA could be affected by the number of independent components if this number is too small, however. Converting the spatially independent maps of ICA into z maps for thresholding tends to overestimate the false-positive rate. However, the overestimation is not very severe and may be acceptable in most cases. The results of CCA are dependent on seeds location. Seeds selected based on different criteria will significantly affect connectivity maps.     

Geometric analysis of anharmonic downward distortion following paths

A mathematical aspect of the anharmonic downward distortion following (ADDF) path is discussed. The ADDF method is utilized as an automated reaction path search method, which can explore transition state geometries on a potential energy surface from a potential minimum. We show that the maximum number of the ADD stationary paths intersecting the potential minimum is 2^{f + 1} ? 2 , where f denotes the degree of freedom of the system. We also show that the bifurcation of the ADD stationary path is essential to detect all the transition states connected from a given minimum. The ADDF computation is demonstrated for a H₂O molecule in which pitchfork bifurcation is observed.     

Effects of Quantum Nuclear Delocalisation on NMR Parameters from Path Integral Molecular Dynamics

The influence of nuclear delocalisation on NMR chemical shifts in molecular organic solids is explored using path integral molecular dynamics (PIMD) and density functional theory calculations of shielding tensors. Nuclear quantum effects are shown to explain previously observed systematic deviations in correlations between calculated and experimental chemical shifts, with particularly large PIMD‐induced changes (up to 23 ppm) observed for carbon atoms in methyl groups. The PIMD approach also enables isotope substitution effects on chemical shifts and J couplings to be predicted in excellent agreement with experiment for both isolated molecules and molecular crystals. An approach based on convoluting calculated shielding or coupling surfaces with probability distributions of selected bond distances and valence angles obtained from PIMD simulations is used to calculate isotope effects.     

微尺度下壁面粗糙度对面向导热影响研究

随着空间尺度的缩小,界面对导热的影响就会越来越明显。本文采用非平衡分子动力学模拟方法模拟了壁面的粗糙度对面向导热的影响,并给出微尺度下的粗糙度定义。在模拟中构造了不同的壁面粗糙度,得到了面向热导率随着壁面粗糙度增加而减小的结果。分析认为壁面的镜面反射率随着粗糙度增加而减小,而镜面反射率减小将导致热导率下降．     

颗粒材料三维应力路径下的接触组构特性

颗粒材料的宏观应力变形特征与其微观接触力、组构等紧密相关.一般而言,强接触系统属于颗粒内部体系的传力结构,其对应的组构张量是影响宏观应力性质的重要因素.细观数值方法(如离散单元法)能够反映物理试验的基本规律,并且可以方便地提取宏微观数据来研究颗粒体系的应力变形机制.采用离散单元法(discrete element method,DEM)进行一系列等$p$等$b$应力路径下颗粒材料的真三轴试验,在此基础上研究了三维应力路径下颗粒材料的宏微观力学参数的演化过程、三维组构张量与应力张量多重联系以及强接触体系反映的宏观应力特征.研究表明:颗粒体系偏应力峰值状态和临界状态均存在与加载路径无关的宏微观特征;三维应力路径下组构张量与应力张量存在非共轴性,但其联合不变量演化过程表现出加载路径无关的特征;与弱接触系统的组构张量相比,强接触系统的组构张量更能反映宏观应力张量的特征;强弱接触体系的组构张量对颗粒体系宏观响应的贡献不同,其分界点存在一定取值范围,但采用平均接触力较为简单合理.      

QSAR studies on estrogen receptor binding affinity of 2-phenylindoles using first-order valence molecular connectivity

The estrogen receptor binding affinity of 2-phenylindoles is found to be significantly correlated with Kier’s first-order valence molecular connectivity index. The correlation equations obtained provide a much simple rationale to design more potent compounds and help in predicting the potency of new compounds.