Single-Round DNA Aptamer Selection by Combined Use of Capillary Electrophoresis and Next Generation Sequencing: An Aptaomics Approach for Identifying Unique Functional Protein-Binding DNA Aptamers

In DNA aptamer selection, existing methods do not discriminate aptamer sequences based on their binding affinity and function and the reproducibility of the selection is often poor, even for the selection of well-known aptamers like those that bind the commonly used model protein thrombin. In the present study, a novel single-round selection method (SR-CE selection) was developed by combining capillary electrophoresis (CE) with next generation sequencing. Using SR-CE selection, a successful semi-quantitative and semi-comprehensive aptamer selection for thrombin was demonstrated with high reproducibility for the first time. Selection rules based on dissociation equilibria and kinetics were devised to obtain families of analogous sequences. Selected sequences of the same family were shown to bind thrombin with high affinity. Furthermore, data acquired from SR-CE selection was mined by creating sub-libraries that were categorized by the functionality of the aptamers (e. g., pre-organized aptamers versus structure-induced aptamers). Using this approach, a novel fluorescent molecular recognition sensor for thrombin with nanomolar detection limits was discovered. Thus, in this proof-of-concept report, we have demonstrated the potential of a “DNA Aptaomics” approach to systematically design functional aptamers as well as to obtain high affinity aptamers.     

Strong Convergence Theorems for the Generalized Viscosity Implicit Rules of Asymptotically Nonexpansive Mappings in the Intermediate Sense in Hilbert Spaces

Abstract

The aim of this paper is to introduce the generalized viscosity implicit rules of one asymptotically nonexpansive mapping in the intermediate sense in Hilbert spaces. We obtain some strong convergence theorems under certain assumptions imposed on the parameters. We also give a numerical example to support our main results. The results obtained in this paper improve and extend many recent ones in this culture.     

Mobility of small molecules in membrane materials based on copolyimide P84

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The duality property of the Discrete Fourier Transform based on Simpson's rule

The classical Discrete Fourier Transform (DFT) satisfies a duality property that transforms a discrete time signal to the frequency domain and back to the original domain. In doing so, the original signal is reversed to within a multiplicative factor, namely the dimension of the transformation matrix. In this paper, we prove that the DFT based on Simpson's method satisfies a similar property and illustrate its effect on a real discrete signal. The duality property is particularly useful in determining the components of the transformation matrix as well as components of its positive integral powers. Copyright © 2012 John Wiley & Sons, Ltd.     

Rule of 100:An inherent limitation or performance measure in oxidative coupling of methane?

The oxidative coupling of methane over La 2 O 3 /CaO type-catalyst in a fixed-bed reactor is studied under a wide range of operating conditions(973相似文献   

In beam Mößbauer spectroscopy: 57Fe in semiconductors

Abstract

An overview of results on microscopic properties, implantation features and dynamics of Fe ions implanted into Si, Ge and ZnS as investigated with in beam Mößbauer spectroscopy(IBMS) is given. Potential and limitations of the method are discussed.     

Organic-Free Interzeolite Transformation in the Absence of Common Building Units

Zeolite crystals can be used as seeds or aluminosilicate sources in syntheses to control polymorphs and/or reduce the quantity of organics used as structure-directing agents. A frequently invoked hypothesis for interzeolite transformations is that zeolites share some underlying similarity in structure, most notably in cases pertaining to organic-free syntheses. Herein, we show for the first time that ZSM-5 (MFI) can be directly obtained from USY (FAU) through an interzeolite transformation between parent–daughter structures lacking common building units in the absence of a structure-directing agent and seeds. We show that interzeolite transformation leads to a crystalline product with fewer defects. Our findings also reveal that ZSM-5 is a metastable intermediate that undergoes further transformation to mordenite (MOR) and quartz. The MFI-to-MOR transition is counter to reported trends for which transformations lead to structures with reduced molar volume. Herein, we propose mechanistic arguments that suggest the driving force for interzeolite transformation is more complex than guidelines posited in the literature.     

Structural and luminescence characteristics of CuAlxIn1−xSe2 (0 < x ≤ 0.30) chalcopyrite solid solutions

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一类极限为1的未定式

对于一类00型或∞0型未定式，给出其极限为1的一个充分条件，并通过实例展示其应用。     

Color centers in irradiated MgF2

Abstract

Color centers in rutile-structured MgF₂ single crystals irradiated at 20K/360K by reactor neutrons are investigated spectroscopically at LNT. Four different types of the F-F vacancy bond in MgF₂ are possibly identified to the observed absorption bands as due to the F₂ centers; instead of previous assignments, the 300nm band to the F₂(D_2h), the 325nm band to the F₂(C₁), the 355nm band to the F₂(C_2v), and the 400nm band to the F₂(C_2h) centers.