Molecular dynamics and quantum chemical approaches in the study of the hydration of protonated cyclohexyldiamines

Explicit hydration of the neutral and charged cyclohexylamine and of the cyclohexyldiamine isomers in their mono- or diprotonated forms is investigated through classical molecular dynamics (MD) simulations in aqueous solutions combined with DFT calculations in amine–water complexes. The MD studies performed in the monoamines reveal that the structure of the hydration shell around the neutral amino group (NH₂) is quite distinct from that around the charged one (NH₃⁺). On average, the number of water molecules surrounding the two groups is calculated to be ～2 and 3–4, respectively. The variation of the hydration structure prompted by the groups’ proximity is discussed based on the data found for the mono- and diprotonated diamines. To have a more detailed picture of the water molecules’ arrangement around the amino groups and of the amine–water hydrogen bonds, geometry optimisations in hydrates with up to six water molecules are carried out at the B3LYP/aug-cc-pVDZ level. Complexation energies are also computed. The main findings emerging from these calculations are found to be very helpful to rationalise the mutual influence of the amino groups and therefore to better elucidate the MD findings. The complementary nature of the two research methods is emphasised as an excellent tool in order to closely examine the hydration of polyamines, as exemplified for the cyclohexyldiamines.     

Application of a line implicit method to fully coupled system of equations for turbulent flow problems

For unstructured finite volume methods, we present a line implicit Runge–Kutta method applied as smoother in an agglomerated multigrid algorithm to significantly improve the reliability and convergence rate to approximate steady-state solutions of the Reynolds-averaged Navier–Stokes equations. To describe turbulence, we consider a one-equation Spalart–Allmaras turbulence model. The line implicit Runge–Kutta method extends a basic explicit Runge–Kutta method by a preconditioner given by an approximate derivative of the residual function. The approximate derivative is only constructed along predetermined lines which resolve anisotropies in the given grid. Therefore, the method is a canonical generalisation of point implicit methods. Numerical examples demonstrate the improvements of the line implicit Runge–Kutta when compared with explicit Runge–Kutta methods accelerated with local time stepping.     

Influence of the surface morphology on the melting of polymer crystals. I. Loops of random length and adjacent reentry

A polymer crystal with a noncrystalline surface layer formed by chain loops of different lengths is considered. It is assumed that the length of each loop can be changed by longitudinal diffusion of the molecule through the crystal lattice. From the condition that the free energy of the system is minimum, the loop length distribution and the average loop length as function of temperature are calculated. In contrast to the results for loops of equal length, for the present model, a substantial thickness of the noncrystalline surface layer and a broad melting range is obtained also for the case of adjacent reentry. In order to get this result one has to take into account that even an “ideal fold” consists of at least four rigidly arranged CH2 groups in energetically unfavored conformation.     

Calculation of the vibration–rotational transition intensities of water molecules trapped in an argon matrix: stretching O–H vibrations spectral region

The frequencies and intensities of vibration–rotational transitions of water molecules in an argon matrix were calculated for temperatures of 6 and 30 K. The rigid asymmetric top approximation was used with available literature values of the effective rotational constants in the ground and excited vibrational states. The calculations were carried out by taking into account the existence of a non-equilibrium population distribution between the rotational levels of ortho- and para-water isomers. It was assumed that the temperature relaxation of the population of rotational levels is independent of the ortho- and para-isomers. Comparison of the results of the theoretical calculations with experimental literature data shows good agreement for the majority of the rotational structure lines for symmetric and antisymmetric stretching vibrations both in the frequency values and in the values of the relative intensities.     

Liquid crystalline properties and photochromism of 4-alkyl-N-(4-alkloxysalicylidene)anilines

Eight new homologous series of 4-alkyl-N-(4-alkloxysalicylidene)anilines were synthesized. The phase transitions of these homologues were determined using differential scanning calorimetry and polarizing optical microscopy. The homologues began to exhibit liquid crystalline phases as the terminal alkyl or alkoxyl chains were lengthened. In addition, some members of these homologues series exhibited photochromism in the solid state.     

Synthesis of 4‐Arylthio‐3‐hydroxyphthalate by the Diels–Alder Reactionof 4‐Arylthio‐3‐hydroxy‐2‐pyrone

Treatment of 4‐arylthio‐3‐hydroxy‐2‐pyrones with acetylenedicarboxylates gave 4‐arylthio‐3‐hydroxyphthalates by the base‐catalyzed Diels–Alder reaction via a decarboxylation in good yields.     

Twist-bend nematics,liquid crystal dimers,structure–property relations

ABSTRACT

One of the current challenges in liquid crystal science is to understand the molecular factors leading to the formation of the intriguing twist-bend nematic phase (N_TB) and determine its properties. During our earlier hunt for the N_TB phase created on cooling directly from the isotropic phase and not the nematic phase, we had prepared 30 symmetric liquid crystal dimers. These had odd spacers and methylene links to the two mesogenic groups; desirable but clearly not essential features for the formation of the N_TB. Here, we report the phases that the dimers exhibit and their transition temperatures as functions of both the lengths of the spacer and the terminal chains. In addition we describe the transitional entropies, their optical textures, the X-ray scattering patterns and the ²H NMR spectra employed in characterising the phases. All of which may lead to important properties of the twist-bend nematic phase.     

Mesogenic and optical properties of α,α′‐bis(4‐alkoxyphenylethynyl)oligothiophenes

Liquid crystalline α,α′‐bis(4‐alkoxyphenylethynyl)oligothiophenes (bi‐ and ter‐thiophene) have been synthesized and their mesogenic behaviour and optical properties investigated. They all exhibited a nematic mesophase, and compounds with long alkoxy chains also showed lamellar phases. Increasing the number of thiophene units increased both the transition temperatures and the mesophase ranges. As for their optical properties, incorporating more thiophene units results in red‐shifted absorption and emission spectra, slightly enhanced quantum efficiency, and a larger Stoke's shift. Most importantly, in terms of the absorption and emission maxima, the incorporation of one 4‐alkoxyphenylethynyl moiety was found to be equivalent to adding one thiophene ring.     

Dispersive liquid–liquid microextraction and spectrophotometric determination of cobalt in water samples

A new simple and rapid dispersive liquid–liquid microextraction has been applied to preconcentrate trace levels of cobalt as a prior step to its determination by spectrophotometric detection. In this method a small amount of chloroform as the extraction solvent was dissolved in pure ethanol as the disperser solvent, then the binary solution was rapidly injected by a syringe into the water sample containing cobalt ions complexed by 1-(2-pyridylazo)-2-naphthol (PAN). This forms a cloudy solution. The cloudy state was the result of chloroform fine droplets formation, which has been dispersed in bulk aqueous sample. Therefore, Co-PAN complex was extracted into the fine chloroform droplets. After centrifugation (2 min at 5000 rpm) these droplets were sedimented at the bottom of conical test tube (about 100 µL) and then the whole of complex enriched extracted phase was determined by a spectrophotometer at 577 nm. Complex formation and extraction are usually affected by some parameters, such as the types and volumes of extraction solvent and disperser solvent, salt effect, pH and the concentration of chelating agent, which have been optimised for the presented method. Under optimum conditions, the enhancement factor (as the ratio of slope of preconcentrated sample to that obtained without preconcentration) of 125 was obtained from 50 mL of water sample, and the limit of detection (LOD) of the method was 0.5 µg L^?1and the relative standard deviation (RSD, n = 5) for 50 µg L^?1 of cobalt was 2.5%. The method was applied to the determination of cobalt in tap and river water samples.