TB-curve, a New 2-D Graphical Representation of DNA Sequences

Based on the classifications of the four nucleic acid bases, we introduce a new 2-D method of DNA representation: TB-curve, which avoids loss of information accompanying alternative 2-D representation in which the curve standing for DNA overlaps and intersects itself. The method is illustrated on the coding sequence of the first exon of human beta-globin gene.     

硅胶键联MPc的制备及其在氧活化中的作用

过渡金属酞等配合物（MPC）用手均相液相氧化中作催化剂已有不少报导，象许多均相催化剂一样，MPC用于均相反应存在着难于从反应体系中分离出来的问题．把均相配合物催化剂固载在无机氧化物如硅股或有机高分子载体上是解决这一问题的一种方法．我们曾尝试把MP。固载在分子筛载体和硅胶载体上，并用ESR研究其对O2的活化作用[1，2]．本文报导MPc通过共价键键联固载在SiO2上，并研究其对O2的活化作用．1实验部分1．1试剂HSIC13为日本东京化成株式会社产品，二级试剂·发烟硫酸（SO。质量分数大于20％）为分析纯试剂．PCl5为化学纯试…     

~(13)C核磁共振研究稀土催化剂聚合双烯的机理

用~(13)C-NMR 方法测定了稀土顺丁二烯和聚异戊二烯链端结构及序列结构,从链端结构推测的聚合活性链端结构与前文是一致的。在聚异戊二烯中存在着“头-头”和“尾-尾”结构,这种结构引起活性链端甲基位置的改变,从而解释了稀土异戊二烯中3,4-链节的形成。测定了不同聚合温度对聚合物中顺、反结构含量的影响,可用活性链端的 anti-syn异构化加以解释。     

Some developments in reaction and solution microcalorimetry,with particular reference to its use in biochemistry and cellular biology

The field of isothermal microcalorimetry as applied to systems of interest for aqueous solution chemistry, biochemistry and in cellular biology is briefly reviewed. Some techniques recently developed in the author's laboratory are described.     

NaBr对C12-s-C12•2Br/氯仿体系中反胶团增溶水能力的影响

近红外(NIR)光谱技术可用于表征氯仿体系中反胶团增溶水的能力. 对于C12-s-C12•2Br (s=2, 3, 4, 5, 6, 8)系列, 不论体系是否含有NaBr电解质, 由于具有较短联接链的表面活性剂易形成较大的反胶团, 其增溶水的能力随着联接链长度增加而降低. 与未含NaBr电解质的体系相比, 当体系中存在NaBr电解质时所形成的反胶团增溶水能力降低.     

The intermolecular potential function of Smith–Thakkar type for C60

The intermolecular potential function of Smith–Thakkar type for C₆₀ has been proposed, and its expression is as follows

The unit of u(r) is J/mol, r is the distance between two C₆₀ molecules center and the unit is nm. Some properties of C₆₀ in the gas and crystal have been studied using the interaction potential of Smith–Thakkar type, such as stability of C₆₀ crystals, virial coefficient and lattice dynamics.     

Counterpoise-corrected potential energy surfaces of simple H-bonded systems

Geometries and stabilization energies of various simple H-bonded complexes (water dimer, hydrogen fluoride dimer, formamide dimer, formic acid dimer) have been determined by a gradient optimization that eliminates the basis set superposition error (BSSE) by the counterpoise (CP) method in each gradient cycle as well as by the standard gradient optimization. Both optimization methods lead to different potential energy surfaces (PES). The difference depends on the theoretical level used and is larger if correlation energy is considered. Intermolecular distances from the CP-corrected PES are consistently longer, and this difference might be significant (∼0.1 ?); also angular characteristics determined from both surfaces differ significantly. Different geometries were obtained even when passing to larger basis sets (aug-cc-pVDZ). The standard optimization procedure can result in a completely wrong structure. For example, the “quasi-linear” structure of the (HF)₂ (global minimum) does not exist at the standard MP2/ 6-31G** PES (where only cyclic structure was detected) and is found only at the CP-corrected PES. Stabilization energies obtained from the CP-corrected PES are always larger than these from the standard PES where the BSSE is added only a posteriori for the final optimized structure; both energies converge only when passing to a larger basis set (aug-cc-pVDZ). Received: 11 March 1998 / Accepted: 19 June 1998 / Published online: 4 September 1998 RID=" ID=" <E6>Acknowledgements.</E6> The project was supported by the Grant Agency of the Czech Republic (Grant No. 203/98/1166). RID=" ID=" <E5>Correspondence to</E5>: P. Hobza     

3，9－二羟乙基－3＇，9＇－二苯甲基－1，5，7，11－四氧杂螺环［5，5］十一烷的合成和聚合反应

从两二酸二乙酯、氯乙酸乙酯和氯苄出发，经ＬｉＡｌＨ４还原，合成新的二元醇，进而合成新的螺环化合物：３，９－二羟乙基－３＇，９＇－二苯甲基－１，５，７，１１－四氧杂螺［５，５］十一烷．该化合物的结构由它的氢和碳－１３核磁共振谱、红外光谱和元素分析得到证明．该单体在三氟化硼乙醚络合物的作用下进行开环聚合反应．由于环上四个取代基的稳定作用，聚合物的收率比较低（产率１０％左右）．通过对聚合物的结构分析，提出了这一单体的阳离子开环聚合反应机理．对随聚合温度升高，聚合物中酯基／苯基的克分子比降低，以及本体聚合时得到交联聚合物等一系列现象作了探讨．     

Application of the semilocalized approach to chemical reactivity of butadiene

The semilocalized approach to chemical reactivity (J. Mol. Struct. (Theochem) 588 (2002) 99; Int. J. Quant. Chem. 94 (2003) 302) is applied to study the addition reaction of an electrophile or nucleophile to the butadiene molecule. In accordance with the classical concept of the reaction center and its neighborhood (substituent), only one of the two H₂C=CH-fragments of butadiene is supposed to be under a direct attack of the reagent, whereas the remaining H₂C=CH-group is assumed to play the role of the substituent and thereby to participate in the process indirectly by exerting certain electron-donating or accepting effect upon the former group and/or the reagent. The main aim of the study consists in revealing the role of the H₂C=CH-substituent in the formation of the known higher reactivity of the terminal carbon atom of the attacked C=C-bond (as compared to the internal atom) irrespective of the nature of the reagent. To this end, we seek to obtain an explicit algebraic representation of the interdependence between the direction and the extent of the total influence of the H₂C=CH-substituent, on the one hand, and the nature of the reagent, on the other hand. The expressions for electron density and bond order redistributions among separate fragments of contacting molecules derived previously in the form of power series are shown to yield the above-anticipated representation. On this basis, it is demonstrated that the electron-donating effect of the initially occupied (bonding) orbital of the substituent and the electron-accepting effect of its initially vacant (antibonding) orbital upon the remaining fragments of the whole reacting system may be considered independently whatever the nature of the reagent. However, a strong interdependence is established between the actual relative extents of these two components of the total effect of the H₂C=CH-group and the electron-donating (accepting) properties of the reagent. Moreover, this group of atoms is shown to manifest itself as an electron-donating (accepting) substituent under influence of an electrophilic (nucleophilic) attack. Using this principal result of the paper, the actual reactivity of butadiene with respect to electrophile (nucleophile) is interpreted by invoking a model system of a substituted ethene containing a simple (one-orbital) electron-donating (accepting) substituent, and a terminal addition easily follows for both types of the reagent.     

Fractal metal nanoparticle aggregates morphology formation mediated by polyelectrolyte/surfactant complex films at interfaces

In this work, the gold nanoparticle self-assembly behavior of mica-surface-confined polyelectrolyte/surfactant complex films was investigated. First, modified partially hydrated polyacrylamide (MHPAM)/hexadecyltrimethylammonium bromide (CTAB) complex films were deposited on the mica surface using Langmuir–Blodgett technique. Then, the preadsorbed MHPAM/CTAB complex film mica plate was dipped into the gold aqueous solution and the interesting fractal nanostructured gold network was formed. In addition, the effect of dipping time on gold nanoparticle self-assembly morphology was studied. The mechanism of formation process is briefly proposed.