基因调控网络推断研究进展

随着高通量技术的发展,越来越多的生物医学组学数据亟需处理与分析,基于运筹优化的生物信息学方法是有效解析高维生物医学数据的重要途径之一。综述了近年来在基因调控网络推断方面的研究进展。针对不同类型的转录组学数据和研究目的,分别建立了相应的基因调控网络推断方法,主要包括先验基因调控网络数据库的建立、基于条件互信息的因果网络推断、基于微分方程的动态基因调控网络推断、转录调控和转录后调控协同作用的网络推断以及基因调控网络活性评价等,并展望了基因调控网络推断的重要研究方向。     

气相-顶空色谱法测定艾拉莫德中潜在基因毒杂质氯甲烷、氯乙烷和2-氯丙烷含量

建立了气相色谱法(GC法)对艾拉莫德中的潜在基因毒杂质氯甲烷、氯乙烷、2-氯丙烷进行定量检测.结果表明,氯甲烷、氯乙烷、2-氯丙烷浓度均在5～40?g/mL范围内,与峰面积线性良好,定量限浓度均为0.2?g/mL,回收率范围均在90％～108％.本研究建立的GC法能用于艾拉莫德中潜在基因毒杂质氯甲烷、氯乙烷、2-氯丙烷...     

用微束激光穿刺技术将商陆抗病毒蛋白(PAP)cDNA导入马铃薯的研究

以马铃薯(Solanum tuberosum L.)品种“津引8号”微薯切片作为外植体,采用微束激光穿刺技术获得了商陆抗病毒蛋白(PAP)cDNA的导入、整合与表达.实验首次利用庆大霉素筛选马铃薯再生苗,庆大霉素筛选浓度为80mg/L,共得到65株庆大霉素抗性苗,全部移栽成活.PCR扩增和PCR-Southern杂交分析表明,PAP cDNA已经稳定整合到马铃薯基因组.攻毒实验发现,多数转基因植株生长健康,对供试病毒PVX具有高度抗性.     

Transitions in a genotype selection model driven by coloured noises

This paper investigates a genotype selection model subjected to both a multiplicative coloured noise and an additive coloured noise with different correlation time τ1 and τ2 by means of the numerical technique. By directly simulating the Langevin Equation, the following results are obtained. （1） The multiplicative coloured noise dominates, however, the effect of the additive coloured noise is not neglected in the practical gene selection process. The selection rate μ decides that the selection is propitious to gene A haploid or gene B haploid. （2） The additive coloured noise intensity and the correlation time τ2 play opposite roles. It is noted that α and τ2 can not separate the single peak, while can make the peak disappear and ~-2 can make the peak be sharp. （3） The multiplicative coloured noise intensity D and the correlation time τ1 can induce phase transition, at the same time they play opposite roles and the reentrance phenomenon appears. In this case, it is easy to select one type haploid from the group with increasing D and decreasing τ1.     

LB膜混合聚集体中极性基团相互作用对光学非线性的影响

通过紫外－可见吸收光谱、压力－面积等温线、二次谐波的测量，研究了不同活性分子混合聚集体的形成对ＬＢ膜光学性质的影响。分子极性基团间的相互作用，使激发态能量及平均偶极矩发生变化，导致ＬＢ膜的光学非线性明显地增强或减弱。     

Optimization of High-Order Harmonic by Genetic Algorithm for the Chirp and Phase of Few-Cycle Pulses

The brightness of a particular harmonic order is optimized for the chirp and initial phase of the laser pulse by genetic algorithm. The influences of the chirp and initial phase of the excitation pulse on the harmonic spectra are discussed in terms of the semi-classical model including the propagation effects. The results indicate that the harmonic intensity and cutoff have strong dependence on the chirp of the laser pulse, but slightly on its initial phase. The high-order harmonics can be enhanced by the optimal laser pulse and its cutoff can be tuned by optimization of the chirp and initial phase of the laser pulse.     

一个新的凋亡抑制蛋白P49的表达及氨基酸序列分析

从海灰翅夜蛾核型多角体病毒（SpliNPV)中新发现的p49基因可抑制病毒感染引起的草地贪夜蛾细胞Sf9的凋亡，用杆状病毒表达系统Bac to Bac克隆表达并收获P49蛋白，发现所测定的表达蛋白的氨基酸序列与由核苷酸推导的氨基酸序列一致，证明p49基因经克隆转染后得到正确表达，P49蛋白上－^91TVTDG^95－氨基酸序列为Caspase识别结构，比较P35与P49蛋白，两蛋白同源性约为48．8％，且都具Caspase识别和切割的氨基酸序列。     

用荧光探针签别CYP2C9*3基因

用一种基激复合物荧光探针系统来签别碱基错配的CYP2C9*3基因,该系统选择两个分开的与靶点碱基相对应的12碱基荧光标记的寡核苷酸作为探针,分别对24碱基、47碱基、质粒(3165bp)的靶点CYP2C9基因和CYP2C9*3基因进行杂交配对,结果该基激复合物荧光探针系统能有效签别各种长度的CYP2C9基因和CYP2C9*3基因,背景干扰很低,灵敏度高,可尝试用于其他基因型的遗传多态性的签别。