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31.
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Piotr Sionkowski Piotr Bedowski Natalia Kruszewska Piotr Weber Beata Marciniak Krzysztof Domino 《Entropy (Basel, Switzerland)》2022,24(6)
Albumin is one of the major components of synovial fluid. Due to its negative surface charge, it plays an essential role in many physiological processes, including the ability to form molecular complexes. In addition, glycosaminoglycans such as hyaluronic acid and chondroitin sulfate are crucial components of synovial fluid involved in the boundary lubrication regime. This study presents the influence of Na, Mg and Ca ions on human serum albumin–hyaluronan/chondroitin-6-sulfate interactions examined using molecular docking followed by molecular dynamics simulations. We analyze chosen glycosaminoglycans binding by employing a conformational entropy approach. In addition, several protein–polymer complexes have been studied to check how the binding site and presence of ions influence affinity. The presence of divalent cations contributes to the decrease of conformational entropy near carboxyl and sulfate groups. This observation can indicate the higher affinity between glycosaminoglycans and albumin. Moreover, domains IIIA and IIIB of albumin have the highest affinity as those are two domains that show a positive net charge that allows for binding with negatively charged glycosaminoglycans. Finally, in discussion, we suggest some research path to find particular features that would carry information about the dynamics of the particular type of polymers or ions. 相似文献
33.
A new Markov process describing crystal growth in three dimensions is introduced. States of the process are configurations of the crystal surface, which has a terrace-edge-kink structure. The states are continuous along edges but discrete across edges, in accordance with the very different rates for the two types of captures of particles. Stationary distributions, describing steady crystal growth, are found in general. To our knowledge, these are the first examples of stationary distributions for layered crystal growth in three dimensions. The steady growth rate and other quantities are obtained explicitly for two interacting edges. For many interacting edges, growth behavior is determined (a) in various asymptotic regimes including thermodynamic limits, (b) via simulations, and (c) using series (cluster) expansions in the slope of the surface, the first three coefficients being computed. The theoretical growth rates show a marked dependence on surface dimensions. This may contribute to the size dependence and dispersion in the observed growth rate of small crystals. 相似文献
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改进了文献中报导的Boltzmann基本方程。与Boltzmann基本方程相比,改进后的Boltzmann方程更全面地描述了电子与基态氩原子碰撞的物理过程,并能计算出整个能量区间的电子分布。利用Boltzmann基本方程和改进的Boltzmann方程,对电子束泵浦氩中能量大于氩原子第一激发态能量(11.56eV)的高能电子分布函数进行了理论计算。计算中,选取了电子碰撞氩的微分电离截面和激发截面的解析表达式。对计算所得的稳态电子分布函数以及达到稳态分布所需的特征时间进行了分析和讨论。 相似文献
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Analysis of electron energy distribution function in a magnetically filtered complex plasma 下载免费PDF全文
The electron energy distribution function (EEDF) for a magnetically filtered dusty plasma is studied in a dusty double plasma device where the electron energy can be varied from 0.15 eV to ~ 2.8 eV and plasma density from 10 6 cm-3 to 10 9cm-3 . The characteristics of EEDF for these ranges of plasma parameters are investigated in a pristine plasma as well as in a dusty plasma. The results show that in the presence of dust, there is a drastic modification in EEDF patterns in a plasma with higher electron temperature and density than those in a low temperature and low density plasma produced by the magnetic filter. 相似文献
38.
《Physics and Chemistry of Liquids》2012,50(6):819-821
The recent study of He and You [P.-S. He and W.-L. You, Int. J. Mod. Phys. B26, 1250107 (2012)] on the relation between superfluid and condensate densities in a two-dimensional weakly interacting Boson system assumed a δ(x???x′) interaction between two particles at sites x and x′. The main purpose of this article is to point out the sensitivity of the conclusions of He and You to the choice of interaction. Thus, it is known for logarithmic interactions that one can have superfluidity without a condensate. Finally, some related ideas are mentioned in relation to superfluidity in liquid 4 He at exceedingly low temperatures. 相似文献
39.
Empirical potential structure refinements have been made to recent high-energy x-ray diffraction data, providing molecular models of deeply supercooled water. The average O-O coordination number is found to drop from 5.13 at 293?K to 4.85 at 244?K, within 3.5?Å. Triplet O-O-O bond angle distributions reveal a broad peak centred at 96.4° at 293?K which shifts to 100.0° at 244?K, indicative of the local geometry becoming increasingly tetrahedral with decreasing temperature. However, although the number of non-bonded interstitial molecules between the first and second shells is depleted upon cooling, the number of interstitial molecules forming triplets that are embedded within the hydrogen bonded tetrahedral network at θOOO?=?53°, remains constant. This is consistent with previous observations of an invariant O-O coordination number with temperature (4.24 out to 3.3?Å) and corresponds to non-bonded molecules positioned at close to half the ideal tetrahedral angle. Both -O-O-O- and hydrogen-bonded -O-H-O- ring length distributions show increases in 6 and 7-membered rings upon supercooling. This is concomitant with a shift and increase in intensity of peaks at r4 ~8.7?Å and r5 ~10.8?Å in the oxygen-oxygen pair distribution function, which in the models correspond to correlations between adjacent and next-nearest-neighbour hydrogen-bonded rings. 相似文献
40.
J. Mulik R. Fuerst M. Guyer J. Meeker E. Sawicki 《International journal of environmental analytical chemistry》2013,93(4):333-348
Abstract Manual twenty-four hour colorimetric procedures for the determination of atmospheric NO2 are described. The methods are based on collecting NO2 by bubbling ambient air for twenty-four hours through reagents that form stable nitrite solutions. The reagents described have a 93 % collection efficiency over the range of 20 to 750 μg/m3 NO2 with no apparent interferences. The inadequacies' of the former reference or alkaline method1 are also described. 相似文献