Identification of low molecular weight proteins isolated by 2-D liquid separations

Proteins with molecular mass (M(r)) <20 kDa are often poorly separated in 2-D sodium dodecyl sulfate polyacrylamide gel electrophoresis. In addition, low-M(r) proteins may not be readily identified using peptide mass fingerprinting (PMF) owing to the small number of peptides generated in tryptic digestion. In this work, we used a 2-D liquid separation method based on chromatofocusing and non-porous silica reversed-phase high-performance liquid chromatography to purify proteins for matrix-assisted laser desorption/ionization time-of-flight mass spectrometric (MALDI-TOFMS) analysis and protein identification. Several proteins were identified using the PMF method where the result was supported using an accurate M(r) value obtained from electrospray ionization TOFMS. However, many proteins were not identified owing to an insufficient number of peptides observed in the MALDI-TOF experiments. The small number of peptides detected in MALDI-TOFMS can result from internal fragmentation, the few arginines in its sequence and incomplete tryptic digestion. MALDI-QTOFMS/MS can be used to identify many of these proteins. The accurate experimental M(r) and pI confirm identification and aid in identifying post-translational modifications such as truncations and acetylations. In some cases, high-quality MS/MS data obtained from the MALDI-QTOF spectrometer overcome preferential cleavages and result in protein identification.     

A comparison of electron ionization mass spectra obtained at 70 eV,low electron energies,and with cold EI and their NIST library identification probabilities

Electron ionization (EI) mass spectra of 46 compounds from several different compound classes were measured. Their molecular ion abundances were compared as obtained with 70‐eV EI, with low eV EI (such as 14 eV), and with EI mass spectra of vibrationally cold molecules in supersonic molecular beams (Cold EI). We further compared these mass spectra in their National Institute of Standards and Technology (NIST) library identification probabilities. We found that

1. Low eV EI is not a soft ionization method, and it has little or no influence on the molecular ion relative abundances for large molecules and those with weak or no molecular ions.
2. Low eV EI for compounds with abundant or dominant molecular ions in their 70 eV mass spectra results in the reduction of low mass fragment ions abundances thereby reducing their NIST library identification probabilities thus rarely justifies its use in real‐world applications.
3. Cold EI significantly enhances the relative abundance of the molecular ions particularly for large compounds; yet, it retains the low mass fragment ions; hence, Cold EI mass spectra can be effectively identified by the NIST library.
4. Different standard EI ion sources provide different 70 eV EI mass spectra. Among the Agilent technologies ion sources, the “Extractor” exhibits relatively abundant molecular ions compared with the “Inert” ion source, while the “High efficiency source” (HES) provides mass spectra with depleted molecular ions compared with the “Inert” ion source or NIST library mass spectra.

These conclusions are demonstrated and supported by experimental data in nine figures and two tables.     

The effect of a coriolis force on Taylor-Couette flow

Taylor-Couette flow subject to a Coriolis force is studied experimentally and numerically. In the experiment, the Couette apparatus is mounted on a turntable with the axis of the cylinders orthogonal to the rotation vector of the turntable. The Coriolis force stabilizes the fluid against the onset of Taylor vortices and alters the velocity fields, both above and below the transition from the initial flow. At small dimensionless turntable frequencies, the transition yields time-independent Taylor vortices which are tilted with respect to the cylinder axis. At larger there is a direct transition to turbulence. We determine the first-order correction to the classical Couette initial flow, to account for the effects of the Coriolis force, by expanding in powers of. We present numerical results for the axial velocity (the only nonvanishing correction term to order) in the infinite-cylinder approximation.     

Modelling of the pressure-velocity correlation in turbulence diffusion

Most current computations of trubulent flows with second-moment closure adopt the diffusion models which neglect the effect of pressure-velocity correlation. In the present paper the importance of this correlation effect is elucidated the neglect of this effect accounts for some major defects in the wide application of the second-moment closures. Through the relation between and , established by Lumley, we propose here a new turbulence diffusion model which takes into consideration the pressure effect. Applications of this new model in the computation of shearless turbulence mixing layer and plane and round-jet flows show that the spreading rate of these flows can be satisfactorily captured.     

Melt drawing as a route to high performance polyethylene

Well established routes for obtaining stiff and strong polyethylene (PE) involve solid state drawing either of solution crystallized gel films or melt crystallized spherulitic PE. The aim of this work is to show the potential of melt deformation as an alternative route for obtaining highly oriented products. Our previous work on the melt deformation route showed that oriented PE fibers could be directly extruded under appropriately controlled conditions [8,9]. Here, we show that PE films (or filaments) can also be melt drawn in the temperature window 130–160 °C, thus yielding oriented products. The advantage of melt drawing over direct melt extrusion is that it allows a wider operational latitude and thus does not require such carefully controlled conditions.The morphology produced by melt deformation is different from solid state deformation and consists of extended chain fibrils with platelet overgrowths. The relative amount of fibrils and platelets depends on operating parameters. The temperature window of PE melt drawing is identified with the regime where some flow induced crystallization takes place. The conditions for melt drawability are of wider generality for crystallizable flexible chain polymers. They are: (i) adequate strain rate to overcome entropie resistance to chain extension, (ii) but not high enough to activate the elastic response of the transient networks in the entangled system, (iii) sufficient strain to fully extend the chain, (iv) appropriate temperature for flow-induced crystallization and strain hardening, and (v) cooling to freeze the oriented structure.Ultra high molecular weight PEs were not the most suitable for melt drawing due to their high recoverable elongation in the melt (melt elasticity) in addition to added limitations imposed by their nascent grain systeme. Our work suggests that an optimum molecular weight for melt drawing is¯M _w(400–900)×10³ with further possibilities for improvement through multimodal distributions.     

锂离子电池正极材料LiMn2O4的低热固相合成与性能表征

锂离子电池具有比能量高、环境污染小等优点,广泛应用于手提电话、便携式电脑、摄像机等设备中。其正极材料的研究是锂离子电池的研究重点。层状结构的LiCoO2、LiNiO2和尖晶石结构的LiMn2O4是仅有的三种能在3.5V以上电位可嵌入Li的正极材料[1~3]。目前市售的锂离子电池主要采用LiCoO2作正极材料,但由于Co资源缺乏和价格相对昂贵,而锰资源丰富,价格低廉且无毒,对环境友好,因此世界各国都在大力进行以LiMn2O4为正极材料的锂离子电池的实用化研究。LiMn2O4传统的制备方法是高温固相反应合成法[4~7],但由于Mn的变价多,与Li形成贫Li或…     

极性和非极性溶剂在聚乙烯中的无限稀释扩散系数的测定

 气相法研究小分子溶剂与高分子聚合物材料之间的相互作用是一个快速、准确、方便的方法 ,可以测量多种小分子溶剂在聚合物中的溶解、扩散参数。通过气相法测定了 5种小分子溶剂 (正己烷、正庚烷、正癸烷、乙醇和水 )在固定液聚乙烯中的保留时间和半峰宽 ,运用vanDeemter模型进行数据处理 ,得到上述 5种小分子在聚乙烯中的无限稀释扩散系数 ,获得了十分有意义的结果。     

低价钛引起的芳酮肟的反应

在低价钛试剂 (TiCl4/Sm)作用下取代苯乙酮肟发生脱肟反应生成酮 ,而在同样条件下 ,二芳酮肟则生成二芳酮、胺或希夫碱     

极低密度聚乙烯与其它聚乙烯的共混

从结构角度，用ＤＳＣ，ＷＡＸＤ，ＳＡＸＳ研究了聚乙烯（ＰＥ）家族中极低密度聚乙烯（ＶＬＤＰＥ）与其它ＰＥ的互容性．ＨＤＰＥ／ＶＬＤＰＥ是共晶互容的，以其大量无规部分“溶解”了ＨＤＰＥ的结晶缺陷部分，提高了ＨＤＰＥ的Ｔｃ，Ｔｍ，Ｘｃ，结晶峰半高宽变窄，晶胞参数随组成而有最低值．ＶＬＤＰＥ与ＬＬＤＰＥ结构极为相似，ＤＳＣ及ＷＡＸＤ证明其共混物是共晶相容体系．ＬＤＰＥ／ＶＬＤＰＥ的结晶度符合按组成的计算值，但晶胞参数ａ，ｂ以及晶粒尺寸增大，ＤＳＣ上有分别相应于两组份的两个Ｔｍ；ＶＬＤＰＥ的Ｔｃ，Ｔｍ峰高之和高于按组份的计算值，ＬＤＰＥ的Ｔｍ，Ｔｃ则低于计算值．认为是正如ＬＬＤＰＥ／ＬＤＰＥ，ＬＤＰＥ向充满整个体积的ＶＬＤＰＥ中不断填入，以ＶＬＤＰＥ为晶核而结晶，形成相分离的不相容体系．     

f-Element/crown ether complexes: 21. Conformational changes in metal complexed versus hydrogen bonded benzo-15-crown-5 in the structure of [Y(OH2)3(NCMe)-(benzo-15-crown-5)][ClO4]3·benzo-15-crown-5·CH3CN

Crystalline [Y(OH₂)₃(NCMe)(benzo-15-crown-5)][ClO₄]₃·benzo-15-crown-5-CH₃CN can be obtained by slowly cooling a reaction mixture of Y(ClO₄)₃·n H₂O with benzo-15-crown-5 in a solution of acetonitrile and methanol (3 : 1) from 60°C to room temperature. The crystal structure of this complex has been determined at –150 and 20°C. The complex is triclinic,P . At –150°C the cell parameters area = 11.986(4),b = 12.071(7),c = 16.364(5) Å, = 93.56(3), = 98.68(3), = 109.68(4)°, vol = 2187 ų, andD _calc = 1.61 g cm^–3 forZ = 2 formula units. 3633 independently observed [F _o 5(F _o)] reflections were used in the final least-squares refinement leading to an agreement index ofR = 0.048. The Y(III) ion coordination geometry approximates a tricapped trigonal prism with three water molecules and three benzo-15-crown-5 oxygen atoms forming the prism, with the two remaining benzo-15-crown-5 oxygen atoms and the acetonitrile molecule completing the coordination as capping atoms. The three water molecules hydrogen bond a second crown ether molecule and two of the perchlorate anions. The two acetonitrile molecules have contacts with perchlorate oxygen atoms close enough for some weak interaction. One perchlorate is ordered, one is partially disordered as is the coordinated solvent molecule, and the third anion is totally disordered. The two unique crown ether molecules have distinctively different conformations.For Part 20, see reference [1].