Analysis of Why Boron Avoids sp2 Hybridization and Classical Structures in the BnHn+2 Series

We performed global minimum searches for the B_nH_n+2 (n=2‐5) series and found that classical structures composed of 2c–2e B? H and B? B bonds become progressively less stable along the series. Relative energies increase from 2.9 kcal mol^?1 in B₂H₄ to 62.3 kcal mol^?1 in B₅H₇. We believe this occurs because boron atoms in the studied molecules are trying to avoid sp² hybridization and trigonal structure at the boron atoms, as in that case one 2p‐AO is empty, which is highly unfavorable. This affinity of boron to have some electron density on all 2p‐AOs and avoiding having one 2p‐AO empty is a main reason why classical structures are not the most stable configurations and why multicenter bonding is so important for the studied boron–hydride clusters as well as for pure boron clusters and boron compounds in general.     

Synthesis of novel scaffolds based on thiazole or triazolothiadiazine linked to benzofuran or benzo[d]thiazole moieties as new hybrid molecules

Abstract

A synthesis of novel hybrid molecules containing thiazole or bis(thiazoles) each bearing benzofuran and/or benzo[d]thiazole moieties by the reaction of the appropriate thioamide derivatives with the corresponding bis-bromoacetyl derivatives is reported. Mono- and bis(triazolothiadiazine) derivatives based on benzofuran or benzo[d]thiazole moieties were also synthesized in good yields by the reaction of the appropriate bis(bromoacetyl) derivatives with each of 4-amino-5-mercapto-1,2,4-triazoles and their corresponding bis-derivatives.     

Theoretical investigation of half‐metallicity in Co/Ni substituted AlN

Results of Co and Ni substituted AlN in the zinc blende phase are presented. For spin up states, the hybridized N‐2p and Co/Ni‐3d states form the valance bands with a bandgap around the Fermi level for both materials, while in the case of the spin down states, the hybridized states cross the Fermi level and hence show metallic nature. It is found that, Al_0.75Co_0.25N and Al_0.75Ni_0.25N are ferromagnetic materials with magnetic moments of 4 μ_B and 3 μ_B, respectively. The integer magnetic moments and the full spin polarization at the Fermi level make these compounds half‐metallic semiconductors. Furthermore it is also found that the interaction with the N‐2p state splits the 5‐fold degenerate Co/Ni‐3d states into t_2g and e_g states. The t_2g states are located at higher energies than the e_g states caused by the tetrahedral symmetry of these compounds. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2011     

鲫鲤杂交F1及其亲本RAPD标记

用RAPD技术对红鲫(♀)×野鲤(♂)及其F1个体进行了研究．15个引物在鲤鱼中扩增出86条带(33条具多态性),红鲫75条带(24条呈多态性),两者共享25条(16条呈多态性)．F     

一个在水稻胚胎中差异表达基因的分离鉴定

通过筛选水稻开花后48～50h的原胚和120～122h的分化胚的cDNA文库,得到一个在胚胎发育过程中表达有差异的克隆,命名为OsEES,测序结果显示OsEES含有一个预测的亚精氨合成酶结构域,编码一个大小约38×103(pI6.5)的蛋白.同时RNA原位杂交的结果显示开花48～50h的原胚中的信号强度明显大于开花120～122h的分化胚,表明OsEES可能在水稻胚胎发生过程中起到一定的调控作用.     

Molecular dynamics simulation of DNA‐directed assembly of nanoparticle superlattices using patterned templates

DNA‐directed assembly is a well developed approach in constructing desired nano‐architectures. On the other hand, E‐beam lithography is widely utilized for high resolution nano‐scale patterning. Recently, a new technique combining these two methods was developed to epitaxially grow DNA‐mediated nanoparticle superlattices on patterned substrates. However, defects are observed in epitaxial layers which restricts this technique from building large‐scale superlattices for real applications. Here we use molecular dynamics simulations to study and predict defect formation on adsorbed superlattice monolayers. We demonstrate that this epitaxial growth is energetically driven by maximizing DNA hybridization between the epitaxial layer and the substrate and that the shape anisotropy of the DNA‐mediated template posts leads to structural defects. We also develop design rules to dramatically reduce defects on epitaxial layers. Ultimately, with the assist of the computational study, this technique will open the door to constructing well‐ordered, three‐dimensional novel nanomaterials. © 2016 Wiley Periodicals, Inc. J. Polym. Sci., Part B: Polym. Phys. 2016 , 54, 1687–1692     

A paper-based resonance energy transfer nucleic acid hybridization assay using upconversion nanoparticles as donors and quantum dots as acceptors

Monodisperse aqueous upconverting nanoparticles (UCNPs) were covalently immobilized on aldehyde modified cellulose paper via reduction amination to develop a luminescence resonance energy transfer (LRET)-based nucleic acid hybridization assay. This first account of covalent immobilization of UCNPs on paper for a bioassay reports an optically responsive method that is sensitive, reproducible and robust. The immobilized UCNPs were decorated with oligonucleotide probes to capture HPRT1 housekeeping gene fragments, which in turn brought reporter conjugated quantum dots (QDs) in close proximity to the UCNPs for LRET. This sandwich assay could detect unlabeled oligonucleotide target, and had a limit of detection of 13 fmol and a dynamic range spanning nearly 3 orders of magnitude. The use of QDs, which are excellent LRET acceptors, demonstrated improved sensitivity, limit of detection, dynamic range and selectivity compared to similar assays that have used molecular fluorophores as acceptors. The selectivity of the assay was attributed to the decoration of the QDs with polyethylene glycol to eliminate non-specific adsorption. The kinetics of hybridization were determined to be diffusion limited and full signal development occurred within 3 min.     

Amplified DNA Detection Sensitivity Using Streptavidin－Biotinylated Protein Complex： Characterization by Electrochemical Impedance Spectroscopy

Thioi-terminated oligonucleotide was immobilized to gold sur-face by self-assembly method. A novel amplification strategy was introduced for improving the sensitivity of DNA hybridiza-tion using biotin labeled protein-streptavidin network complex. This complex can be formed in a cross-linking network of molecules so that the amplification of the response signal will be realized due to the big molecular size of the complex. It could be proved from the impedance technique that this amplification strategy caused dramatic improvement of the detection sensitivi-ty. These results give significant advances in the generality and sensitivity as it is applied to biosensing.     

Electrochemical biosensing of DNA hybridization by ferrocenyl groups functionalized polypyrrole

We have developed a new material based on polypyrrole functionalized with both ferrocenyl group and DNA probe. We have developed a precursor polymer based on a pyrrole 3-acetic acid and a pyrrole bearing ferrocenyl groups substituted by easy leaving group in which amino-labeled oligonocleotides probe were directly linked. The electrochemical response of the modified electrode was examined both in aqueous and organic media and shows high electroactivity in both media. A large modification of redox activity of ferrocenyl groups was obtained upon addition of ODN target to the electrolytic media, which is determined by amperometric methods. The detection limit of this electrochemical biosensor is about 10⁻¹⁴ mol without any signal processing.     

Off‐atomic site charges in some anions,metal cations,and complexes: Significance for electrostatic properties and binding

Electronic structures and properties of several anions, metal cations, and their complexes with neutral molecules were investigated at the HF/6‐31G** and B3LYP/6‐31G** levels of theory. Charges shifted from atomic sites due to atomic orbital hybridization called hybridization displacement charges (HDC) were investigated in detail. It has been found that many components of HDC are associated with each atom of ion that are shifted from the atomic sites, those associated with metal cations being shifted by large distances as found previously in electrically neutral systems. It is shown that atomic orbitals are appreciably rehybridized in going from neutral molecules to anions and cations. Molecular dipole moments and surface molecular electrostatic potentials (MEP) are obtained satisfactorily using HDC for the various types of species mentioned above. In the OH^?? H₂O complex, reversal of direction of shift of an HDC component associated with the hydrogen atom of H₂O involved in hydrogen bonding, indicates that the hydrogen bond between OH^? and H₂O would have some covalent character. Other atomic site‐based point charge models cannot provide such information about the nature of bonding. © 2006 Wiley Periodicals, Inc. Int J Quantum Chem 2007