Tautomerism,protonation regioselectivity of 2-pyrrolidone and its complexation with palladium(II): an insight from the viewpoint of quantum chemistry

It has been established (AM1, PM3, RHF/6-31G**, MP2/6-31G**//RHF/6-31G**) that in the gaseous phase and in aqueous solution, the most thermodynamically stable tautomer of 2-pyrrolidone is lactame. According to PM3 evaluations with an explicit accounting for aqueous medium, the state of tautomeric equilibrium serves as a prerequisite to participation of 2-pyrrolidone's lactime tautomer (pyrroline-2-ol) in complexation with palladium(II) in aqueous solution. 2-Pyrrolidone protonation in the gaseous phase and in aqueous medium has been shown to proceed via the oxygen atom, corresponding to expectations on mesomeric displacement of electron density in the amide fragment. The aqueous medium stabilizes 2-pyrrolidone's lactime tautomer to a greater extent than for lactame, and an O-protonated cyclic amide compared to an N-protonated one. The stereodirective character of palladium(II) complexation with chloride ion and pyrroline-2-ol has been explained. The initially formed tetragonal–pyramidal adduct with an axial organic ligand rearranges into a precursor of the cis product, an intermediate with an extra coordinated axial chlorine atom. The less thermodynamically stable cis isomer of [PdCl₂(pyrroline-2-ol)₂] appears because its precursor is a lower energy intermediate of associative nucleophilic substitution. At a supramolecular level, cis product is capable of being stabilized by means of intermolecular dipole–dipole association in a crystal.     

Low-pressure pyrolysis of tBu2SO: synthesis and IR spectroscopic detection of HSOH

Sulfenic acid (HSOH, 1 ) has been synthesized in the gas‐phase by low‐pressure high‐temperature (1150 °C) pyrolysis of di‐tert‐butyl sulfoxide (tBu₂SO, 2 ) and characterized by means of matrix isolation and gas‐phase IR spectroscopy. High‐level coupled‐cluster (CC) calculations (CCSD(T)/cc‐pVTZ and CCSD(T)/cc‐pVQZ) support the first identification of the gas‐phase IR spectrum of 1 and enable its spectral characterization. Five of the six vibrational fundamentals of matrix‐isolated 1 have been assigned, and its rotational‐resolved gas‐phase IR spectrum provides additional information on the O–H and S–H stretching fundamentals. Investigations of the pyrolysis reaction by mass spectrometry, matrix isolation, and gas‐phase FT‐IR spectroscopy reveal that, up to 500 °C, 2 decomposes selectively into tert‐butylsulfenic acid, (tBuSOH, 3 ), and 2‐methylpropene. The formation of the isomeric sulfoxide (tBu(H)SO, 3 a ) has been excluded. Transient 3 has been characterized by a comprehensive matrix and gas‐phase vibrational IR study guided by the predicted vibrational spectrum calculated at the density functional theory (DFT) level (B3LYP/6‐311+G(2d,p)). At higher temperatures, the intramolecular decomposition of 3 , monitored by matrix IR spectroscopy, yields short‐lived 1 along with 2‐methylpropene, but also H₂O, and most probably sulfur atoms. In addition, HSSOH ( 6 ), H₂, and S₂O are found among the final pyrolysis products observed at 1150 °C in the gas phase owing to competing intra‐ and intermolecular decomposition routes of 3 . The decomposition routes of the starting compound 2 and of the primary intermediate 3 are discussed on the basis of experimental results and a computational study performed at the B3LYP/6‐311G* and second‐order Møller–Plesset (MP2/6‐311G* and RI‐MP2/QZVPP) levels of theory.     

Hydrogen bonds and local symmetry in the crystal structure of gibbsite

First‐principles quantum mechanical calculations of NMR chemical shifts and quadrupolar parameters have been carried out to assign the ²⁷Al MAS NMR resonances in gibbsite. The ²⁷Al NMR spectrum shows two signals for octahedral aluminum revealing two aluminum sites coordinated by six hydroxyl groups each, although the crystallographic positions of the two Al sites show little difference. The presence of two distinguished ²⁷Al NMR resonances characterized by rather similar chemical shifts but quadrupolar coupling constants differing by roughly a factor of two is explained by different character of the hydrogen bonds, in which the hydroxyls forming the corresponding octahedron around each aluminum site, are involved. The Al‐I site characterized by a C_Q = 4.6 MHz is surrounded by OH? groups participating in four intralayer and two interlayer hydrogen bonds, while the Al‐II site with the smaller quadrupolar constant (2.2 MHz) is coordinated by hydroxides, of which two point toward the intralayer cavities and four OH‐bonds are aligned toward the interlayer gallery. In high‐resolution solid‐state ¹H CRAMPS (combination of rotation and multiple‐pulse spectroscopy) four signals with an intensity ratio of 1:2:2:1 are resolved which allow to distinguish six nonequivalent hydrogen sites reported in the gibbsite crystal structure and to ascribe them to two types of structural OH groups associated with intralayer and interlayer hydrogen bonds. This study can be applied to characterize the gibbsite‐like layer—intergallery interactions associated with hydrogen bonding in the more complex systems, such as synthetic aluminum layered double hydroxides. Copyright © 2010 John Wiley & Sons, Ltd.     

Polyisoprenylated benzophenone derivatives from the fruits of Garcinia cambogia and their absolute configuration by quantum chemical circular dichroism calculations

Three new tetracyclic polyisoprenylated xanthones, named oxy-guttiferones M, K2, and I, along with oxy-guttiferone K and guttiferone M, have been isolated from the fruits of Garcinia cambogia. Their structures were elucidated by MS and NMR spectroscopic experiments. The absolute configurations of oxy-guttiferone K, taken as a model of tetracyclic xanthones, and guttiferone M, as a model of polyisoprenylated benzophenones, have been determined by comparison of their experimentally measured circular dichroism (CD) curves with the TDDFT-predicted curves.     

Modulating the Photochemistry of Bipyridylic Compounds by Symmetric Substitutions

A quantum electronic study of the effect of substituents on (2,2′‐bipyridyl)‐3,3′‐diol and (2,2′‐bipyridyl)‐3,3′‐diamine is presented. A large difference in the photochemical behavior between the original and the substituted selected systems is expected. For the sake of simplicity, the study is restricted to the symmetrically bi‐substituted compounds: fluorine, the more electronegative atom and thus a strong σ‐acceptor but also a weak π‐donor group, and NO₂, a strong π‐acceptor substituent. Among the large set of compounds studied, two receive special attention: 5,5′‐dinitro‐(2,2′‐bipyridyl)‐3,3′‐diamine and 6,6′‐difluoro‐(2,2′‐bipyridyl)‐3,3′‐diol. While in the former case the nitro substitution transforms (2,2′‐bipyridyl)‐3,3′‐diamine, previously suggested to behave as a photomemory material, into a simple fluorescent species, the latter substitution turns (2,2′‐bipyridyl)‐3,3′‐diol into a fresh new candidate for a photomemory device.     

Chemical shift driven geometry optimization

A new method for refinement of 3D molecular structures by geometry optimization is presented. Prerequisites are a force field and a very fast procedure for the calculation of chemical shifts in every step of optimization. To the energy, provided by the force field (COSMOS force field), a pseudoenergy, depending on the difference between experimental and calculated chemical shifts, is added. In addition to the energy gradients, pseudoforces are computed. This requires the derivatives of the chemical shifts with respect to the coordinates. The pseudoforces are analytically derived from the integral expressions of the bond polarization theory. Single chemical shift values attributed to corresponding atoms are considered for structural correction. As a first example, this method is applied for proton position refinement of the D-mannitol X-ray structure. A crystal structure refinement with 13C chemical shift pseudoforces is carried out.     

Synthesis and crystal structure of a new one-dimensional system with end-to-end single dicyanamide bridges between nickel(II) centres

The complex [Ni(tn)₂{N(CN)₂}]ClO₄ (tn=trimethylenediamine) has been synthesized and the structure has been determined. The complex forms a one-dimensional chain structure via the bidentate bridging ligand dicyanamide. A two-dimensional networks is formed via interchain hydrogen bond interactions.