SUBSTITUTED 4,5-DIOXO-1,3-DIAZA-2λ3,4λ4-DIPHOSPHOLANE AND RELATED COMPOUNDS

Abstract

Cyclization of 1 with 2 yielded the title compound 3, which was transformed into the corresponding 1,3,2,4-diazadiphospholanes 4 and 5 by using DMSO or sulfur respectively. The addition reaction of 3 with butanedione gave 3,4-di-oxo-1-phenyl-2,5-diaza-6,9-dioxa-1λ⁵,3λ⁴-diphosphaspiro[4,4]nonane 6. The structures of 3, 4 and 5 were confirmed by elemental analysis, IR, NMR and GC-MS. Although 6 could not be isolated in pure form because of its rapid decomposition, the ₃₁P NMR data indicated its existence. It was found that there were cis- and trans-isomers in 3, 4, 5 and 6.     

一个闭环二噻吩乙烯及其Ag(Ⅰ)配合物的合成、结构和光致变色性质

首次合成了一个含氰基二噻吩乙烯闭环体化合物(L_c),用IR、¹H NMR及X射线单晶衍射研究其结构,表明它是一对R,R和S,S对映异构体组成的消旋混合物,证实了光化学顺旋环化反应中己三烯结构转变为环己二烯结构。紫外可见光谱研究表明其在THF溶液和固相均具有可逆的光致变色性质,可见区最大吸收波长为607 nm。光异构化动力学研究表明开环反应为一级反应,而闭环反应为0级反应。将其进一步用作配体与Ag(CF₃SO₃)自组装合成了配合物1,并用元素分析、IR、¹H NMR及电喷雾质谱进行结构表征。1在固相具有可逆的光致变色性质,但与开环配体组装的配合物不同,由于刚性的闭环配体结构限制了2个噻吩环的自由旋转,银离子与闭环配体配位未能修饰配体的吸收波长,1的可见区最大吸收波长与配体相同。与闭环配体相比,1的光异构化反应速度更快,这和循环伏安法测得其具有比配体更小的带隙结果一致。     

Liquid crystalline banana‐shaped monomers derived from 2,7‐naphthalene: synthesis and properties

Three banana‐shaped monomers, i.e. 2,7‐naphthalene bis[4‐(4‐allyloxyphenylazo)‐benzoate], 2,7‐naphthalene bis[4‐(4‐allyloxy‐3‐fluorophenylazo)benzoate] and 2,7‐naphthalene bis{4‐[4‐(10‐undecenyloxy)phenylazo]benzoate}, containing azobenzene as side arms, 2,7‐dihydroxynaphthalene as central units and terminal double bonds as polymerisable functional groups, were synthesised and their mesophase behaviour investigated. Polarizing optical microscopy and DSC measurements reveal that all compounds exhibit nematic mesophases. The absorption spectrum of the trans‐azobenzene groups displays a high‐intensity π–π* transition at about 365 nm and a low‐intensity n–π* transition at around 450 nm for all compounds. Hence, photochromism can be achieved by the introduction of the azo linkage to banana‐shaped liquid crystals molecules.     

Lipase mediated separation of triterpene structural isomers, α- and β-amyrin

Pentacyclic triterpenoids α- and β-amyrin possess a wide range of biological and pharmacological activities. High structural similarity between these two structural isomers makes their chromatographic separation an ineffective and tedious choice. In this study, Candida rugosa lipase catalyzed separation protocol for the isolation of individual isomers has been developed. In the presence of vinyl acetate as the acyl donor, Candida rugosa lipase carried out acetylation of β-amyrin more efficiently as compared to α-amyrin leading to a kinetic separation. The conditions of transesterification reaction were optimized systematically, which was utilized to separate α- and β-amyrin from a mixture obtained from the latex of Plumeria obtusa.     

Dispersion Interaction Stabilizes Sterically Hindered Double Fullerenes

By state‐of‐the‐art quantum chemical methods, we show that for bulky functional groups like cyclohexane, [20]fullerene, dodecahedrane, and C₆₀, the attractive dispersion interaction can have a greater impact on stereochemistry than the repulsive steric effect, making the compact isomer the more stable one. In particular, for the double C₆₀ adduct of pentacene 1 , the syn isomer should be the main product instead of the anti one inferred in the original synthesis experiment (Y. Murata et al., J. Org. Chem.­ 1999 , 64, 3483). With and without dispersion interactions taken into account, the Gibbs energy difference ΔG(syn?anti) is ?6.36 and +1.15 kcal mol^?1, respectively. This study reminds us that dispersion interactions as well as electrostatic or hyperconjugation effects, etc. can lead to some unusual stereochemical phenomena.     

(Quasi‐)Racemic X‐ray Structures of Glycosylated and Non‐Glycosylated Forms of the Chemokine Ser‐CCL1 Prepared by Total Chemical Synthesis

Our goal was to obtain the X‐ray crystal structure of the glycosylated chemokine Ser‐CCL1. Glycoproteins can be hard to crystallize because of the heterogeneity of the oligosaccharide (glycan) moiety. We used glycosylated Ser‐CCL1 that had been prepared by total chemical synthesis as a homogeneous compound containing an N‐linked asialo biantennary nonasaccharide glycan moiety of defined covalent structure. Facile crystal formation occurred from a quasi‐racemic mixture consisting of glycosylated L ‐protein and non‐glycosylated‐D ‐protein, while no crystals were obtained from the glycosylated L ‐protein alone. The structure was solved at a resolution of 2.6–2.1 Å. However, the glycan moiety was disordered: only the N‐linked GlcNAc sugar was well‐defined in the electron density map. A racemic mixture of the protein enantiomers L ‐Ser‐CCL1 and D ‐Ser‐CCL1 was also crystallized, and the structure of the true racemate was solved at a resolution of 2.7–2.15 Å. Superimposition of the structures of the protein moieties of L ‐Ser‐CCL1 and glycosylated‐L ‐Ser‐CCL1 revealed there was no significant alteration of the protein structure by N‐glycosylation.     

Functionalized Graphene as a Gatekeeper for Chiral Molecules: An Alternative Concept for Chiral Separation

We propose a new method of chiral separation using functionalized nanoporous graphene as an example. Computational simulations based on density functional theory show that the attachment of a suitable chiral “bouncer” molecule to the pore rim prevents the passage of the undesired enantiomer while letting its mirror image through.     

Racemic and Quasi‐Racemic X‐ray Structures of Cyclic Disulfide‐Rich Peptide Drug Scaffolds

Cyclic disulfide‐rich peptides have exceptional stability and are promising frameworks for drug design. We were interested in obtaining X‐ray structures of these peptides to assist in drug design applications, but disulfide‐rich peptides can be notoriously difficult to crystallize. To overcome this limitation, we chemically synthesized the L ‐ and D ‐forms of three prototypic cyclic disulfide‐rich peptides: SFTI‐1 (14‐mer with one disulfide bond), cVc1.1 (22‐mer with two disulfide bonds), and kB1 (29‐mer with three disulfide bonds) for racemic crystallization studies. Facile crystal formation occurred from a racemic mixture of each peptide, giving structures solved at resolutions from 1.25 Å to 1.9 Å. Additionally, we obtained the quasi‐racemic structures of two mutants of kB1, [G6A]kB1, and [V25A]kB1, which were solved at a resolution of 1.25 Å and 2.3 Å, respectively. The racemic crystallography approach appears to have broad utility in the structural biology of cyclic peptides.     

Mechanistic details of metal-free cyclization reaction of organophosphorus oxide with alkynes mediated by 2,6-lutidine and Tf2O

Theoretical investigations have elucidated the mechanism of metal-free electrophilic phosphinative cyclization of alkynes reaction reported by Miura and coworkers. Two competitive mechanisms I and II were explored without or with 2,6-lutidine. Both of I and II involve transformation of P(V) to P(III), electrophilic addition, ring opening and cyclization/cyclization, hydrogen-transfer, and oxidation. The rate-determining step of mechanism I and competitive less-step II is electrophilic [2 + 1] cycloaddition and electrophilic addition via single C P bond formation with activation barrier of 13.5 and 10.6 kcal/mol, respectively. Our calculation results suggested that the cumulative effect of the isomer of 2,6-lutidine and Tf₂O as well as TfO⁻ affects the title reaction to some extent, and simultaneously activates key reaction sites and reverses the polarities of them via the formation of abundant noncovalent interactions to decrease activation barriers of TSs. In addition, the effects of two series substituents on reactivity of phosphine oxide were investigated. Therefore, our study will serve as useful guidance for more efficient metal-free synthesis of organophosphorus compounds mediated by pyridine reagents.     

Theoretical Studies on Dihedral Angle-Bending Isomers of M2Pt20/-Clusters

The structures and electronic properties of the gaseous M\begin{document}$ _2 $\end{document}Pt\begin{document}$ _2 $\end{document}\begin{document}$ ^{0/-} $\end{document} clusters (M represents the alkaline earth metal) were investigated using the density functional theory (B3LYP and PBE0) and wave function theory (SCS-MP2, CCSD and CCSD (T)). The results indicate that the D\begin{document}$ _{2{h}} $\end{document} isomers with the planar structures are more stable than the C\begin{document}$ _{2v} $\end{document} isomers with smaller dihedral angles and shorter Pt-Pt bond lengths. The mutual competition of M(s, p)-Pt(5d) interaction and Pt-Pt covalent bonding contributes to the different stabilizations of the two kinds of isomers. The M(s, p)-Pt(5d) interaction favors the planar isomers with D\begin{document}$ _{2h} $\end{document} symmetry, while the Pt-Pt covalent bonding leads to the C\begin{document}$ _{2v} $\end{document} isomers with bending structures. Two different crossing points are determined in the potential energy curves of Be\begin{document}$ _2 $\end{document}Pt\begin{document}$ _2 $\end{document} with the singlet and triplet states. But there is just one crossing point in potential energy curves of Ra\begin{document}$ _2 $\end{document}Pt\begin{document}$ _2 $\end{document} and Ca\begin{document}$ _2 $\end{document}Pt\begin{document}$ _2 $\end{document}\begin{document}$ ^- $\end{document} because of flatter potential energy curves of Ra\begin{document}$ _2 $\end{document}Pt\begin{document}$ _2 $\end{document} with the triplet state or Ca\begin{document}$ _2 $\end{document}Pt\begin{document}$ _2 $\end{document}\begin{document}$ ^- $\end{document} with quartet state. The results reveal a unique example of dihedral angle-bending isomers with the smallest number of atoms and may help the understanding of the bonding properties of other potential angle-bending isomers.