Computational, 1H NMR,and X‐ray structural studies on 1‐arylurazole tetrazane dimers

Nitrogen‐centered urazole radicals exist in equilibrium with tetrazane dimers in solution. The equilibrium established typically favors the free‐radical form. However, 1‐arylurazole radicals bearing substituents at the ortho position favor the dimeric form. We were able to determine the structure of one of the dimers (substituted at both ortho positions with methyl groups), namely 1,2‐(2,4‐dimethylphenyl)‐2‐[2‐(2,4‐dimethylphenyl)‐4‐methyl‐3,5‐dioxo‐1,2,4‐triazolidin‐1‐yl]‐4‐methyl‐1,2,4‐triazolidine‐3,5‐dione, C₂₄H₂₈N₆O₄, via X‐ray crystallography. The experimentally determined structure agreed well with the computationally obtained geometry at the B3LYP/6‐311G(d,p) level of theory. The preferred syn conformation of these 1‐arylurazole dimers results in the two aromatic rings being proximate and nearly parallel, which leads to some interesting shielding effects of certain signals in the ¹H NMR spectrum. Armed with this information, we were able to decipher the more complicated ¹H NMR spectrum obtained from a dimer that was monosubstituted at the ortho position with a methyl group.     

Extended triphenylamine conjugated systems derivatized by perfluorophenyl groups

Two triphenylamine derivatives bearing terminal perfluorophenyl groups have been synthesized. Their HOMO, LUMO levels and electronic band gap have been evaluated by spectroscopic and electrochemical measurements and rationalized with theoretical calculations. X-ray structure analysis of crystals allowed the observation of multiple intermolecular interactions due to the presence of the perfluorophenyl pendant groups. The multiplication of these interactions explains the differences between calculated (in gas phase) and observed (in solid states) structures.     

A computational study of unique properties of pillar[n]quinones: self-assembly to tubular structures and potential applications as electron acceptors and anion recognizers

Density functional theory has been used to calculate the thermodynamic properties and molecular orbitals of pillar[n]quinones. Pillar[n]quinones are expected to be effective electron acceptors and the ability to accept more than one electron increases with the size of the interior cavity. Pillar[5]quinone and pillar[7]quinone show a great intramolecular charge transfer upon the electron excitation from highest occupied molecular orbital (HOMO) to lowest unoccupied molecular orbital (LUMO) as indicated by a large difference of electron distributions between their HOMO and LUMO and a notable dipole moment difference between the ground and first triplet excited state. The aggregation of pillar[n]quinones leads to tubular dimeric structures joined by 2n C? H···O nonclassical hydrogen bonds (HBs) with binding energies about 2 kcal/mol per HB. The longitudinal extension of the supramolecular self‐assembly of pillar[n]quinone may be adjustable through forming and breaking their HBs by controlling the surrounding environment. The tunability of the diameter of the tubular structures can be achieved by changing the number of quinone units in the pillar[n]quinone. The electrostatic potential maps of pillar[n]quinones indicate that the positive charge in the interior cavity decreases as the number of quinone units increases. Chloride and bromide anions are chosen to examine the noncovalent anion‐π interactions between pillar[n]quinones and captured anions. The calculations show that the better compatibility of the effective radius of the anions with the interior dimension of pillar[n]quinone leads to larger stabilization energy. The selectivity of spatial matching and specific interaction of pillar[n]quinone is believed to possibly serve as a candidate for ionic and molecular recognition. © 2011 Wiley Periodicals, Inc. J Comput Chem, 2011     

Copper(I) d10···d10 Interactions and Diselenide(1–) Radical Anions in Mixed Valent Selenides Cu4–δBiSe4I

Melting reactions of copper, CuI, selenium, and Bi₂Se₃ yielded black, shiny needles of Cu₄BiSe₄I = Cu₄BiSe₂(Se₂)I. The compound decomposes peritectically above 635(5) K and crystallizes in the orthorhombic space group Pnma with a = 960.1(1) pm, b = 413.16(3) pm, and c = 2274.7(2) pm (T = 293(2) K). In the crystal structure, strands ${1}\atop{{\infty}}$ [BiSeSe_2/2(Se₂)_2/2]^3– run along [010]. Therein, the bismuth(III) cation is coordinated by five selenium atoms, which form a square pyramid. The copper(I) cations are coordinated tetrahedrally by selenide, diselenide and iodide ions. Edge‐sharing of these tetrahedra results in zigzag chains of copper cations with short distances of 262.7(4) pm. Enhanced dispersion of the 3d bands, the Crystal Orbital Hamilton Populations (COHP), and disynaptic ELI‐D basins indicate weakly attractive d¹⁰···d¹⁰ interactions between the copper cations. The semiconducting properties and the calculated electronic band structure suggest an electron‐precise compound. In copper‐deficient Cu_3.824(8)BiSe₄I, the Cu···Cu distances are 5 pm shorter, and Raman spectroscopy indicates the presence of diselenide(1–) radical anions besides the diselenide(2–) groups. As a result, in Cu_3.824(8)BiSe₄I, selenium coexists in the oxidations states –II, –I, and –0.5.     

Crystal Structure and Photoluminescence of a New Cadmium Complex with 6,7-Dicyanodipyridoquinoxalin

The reaction of CdCl2 with 6,7-dicyanodipyridoquinoxaline (DICNQ) by solvothermal reaction gives rise to a coordination polymer [CdCl2(DICNQ)]n 1. Single-crystal X-ray diffraction analysis reveals that the compound in space group Pbcn creates 1-D chloro-bridging chains. Crystal data for 1: a = 6.756(1), b = 35.371(6), c = 7.027(1) , V = 1679.1(5) 3, Z = 4.00, C16H6CdCl2N6, Mr = 465.57, Dc = 1.842 g/cm3, μ = 1.630 mm-1, F(000) = 904, S = 1.005 and T = 293(2) K. The final R = 0.0376 and wR = 0.1029 for 1291 observed reflections with I > 2σ(I), and R = 0.0499 and wR = 0.1125 for all data. The 1-D chloro-bridging chains are parallel-stacked in the a and b directions, and further stabilized through π-stacking interactions, hydrogen-bonding interactions and C≡N···π interactions to generate a 3-D structure. Compound 1 displays intense bluish-green photoluminescence from the intraligand charge-transfer of the DICNQ ligand and the Cl--to-DICNQ charge-transfer mechanism which is probed by the density of states (DOS) calculations.     

Anagostic interactions, revisiting the crystal structure of nickel dithiocarbamate complex and its antibacterial and antifungal studies

The synthesis of Ni(dtc)₂ [dtc = diethyldithiocarbamate] has been achieved by the interaction of NiL(ClO₄)₂ with sodium diethyldithiocarbamate. Although single crystal structure of this complex was already reported (R = 10.6%), we were able to refine crystal structure up to R = 2.99%. We also observed rare C-H?Ni anagostic interactions generally exhibited by d⁸ complexes which were overlooked previously. To investigate the structure of Ni(dtc)₂ in solution, variable temperature NMR spectra in solution have also been recorded between 25 and −50 °C. Ni(dtc)₂ was also tested for antibacterial and antifungal activities. It showed higher activity against the bacteria and fungi than the known antibiotics.     

Induction-driven stabilization of the anion-π interaction in electron-rich aromatics as the key to fluoride inclusion in imidazolium-cage receptors

Intermolecular interactions that involve aromatic rings are key processes in both chemical and biological recognition. It is common knowledge that the existence of anion-π interactions between anions and electron-deficient (π-acidic) aromatics indicates that electron-rich (π-basic) aromatics are expected to be repulsive to anions due to their electron-donating character. Here we report the first concrete theoretical and experimental evidence of the anion-π interaction between electron-rich alkylbenzene rings and a fluoride ion in CH(3)CN. The cyclophane cavity bridged with three naphthoimidazolium groups selectively complexes a fluoride ion by means of a combination of anion-π interactions and (C-H)(+)···F(-)-type ionic hydrogen bonds. (1)H NMR, (19)F NMR, and fluorescence spectra of 1 and 2 with fluoride ions are examined to show that only 2 can host a fluoride ion in the cavity between two alkylbenzene rings to form a sandwich complex. In addition, the cage compounds can serve as highly selective and ratiometric fluorescent sensors for a fluoride ion. With the addition of 1 equiv of F(-), a strongly increased fluorescence emission centered at 385 nm appears at the expense of the fluorescence emission of 2 centered at 474 nm. Finally, isothermal titration calorimetry (ITC) experiments were performed to obtain the binding constants of the compounds 1 and 2 with F(-) as well as Gibbs free energy. The 2-F(-) complex is more stable than the 1-F(-) complex by 1.87 kcal mol(-1), which is attributable to the stronger anion-π interaction between F(-) and triethylbenzene.