Highly enantioselective synthesis and potential biological activity of chiral novel nucleoside analogues containing adenine and naturally phenol derivatives

This paper described an efficient synthetic strategy for chiral acyclic nucleoside analogues containing both the phenoxy components of some bioactive natural compounds and a heterocyclic base. The phenoxy components with adenine moiety were incorporated into the chiral acyclic nucleoside analogues through two key synthetic tactics. Chiron 5-(R)-menthyloxy-2(5H)-furanone 5 was obtained in good yield from the cheap starting material furfural via a valuable synthetic route. The asymmetric Michael addition of 5 with adenine and the subsequent reduction reaction afforded the key chiral intermediate, 2-(R)-(9′-adeninyl)-1,4-butanediol 8. The absolute configuration of 8 was established by X-ray crystallography. The intermolecular dehydration reaction between 2-(9′-adeninyl)-1,4-butanediol 8 and phenoxy components 9 on treatment with diethyl azodicarboxylate and triphenylphosphine was carried out to give the chiral acyclic nucleoside analogues 1a-1e. The regioselectivity of the reaction was established by NMR methods, especially through ¹³C NMR shifts and NOE effect observed in the target molecule 1c, as well as by HMBC/HMQC experiments. The target compounds were tested for inhibition of cytopathogenicity against different cancer cells and exhibited potential anticancer activity.     

A stereoselective synthesis of 9-(3-O-benzyl-5-O-tetrahydropyranyl-β-d-arabinofuranosyl)adenine, a potentially useful intermediate for ribonucleoside synthesis

A novel synthesis for preparing 9-(3-O-benzyl-5-O-tetrahydropyranyl-β-d-arabinofuranosyl)adenine (6) has been developed which does not require sub zero temperatures or exotic reagents. A key step in this synthesis is the selective protection of the 3′-OH of ara-A with a benzyl group. The 5′-OH is then selectively protected with DHP to yield 6, a potentially useful intermediate. A synthesis of 9-(2,3-dideoxy-2-fluoro-β-d-threo-pentofuranosyl)adenine (1, FddA), an anti-viral compound, is given to illustrate the utility of this new approach.     

EQCM and Fluoroelectrochemical Studies on the Catalytic Oxidation of NADH at a Pencil 8B‐Scrawled Gold Electrode with High Detection Sensitivity

We report for the first time the effective catalytic electrooxidation of nicotinamide adenine dinucleotide (NADH) on the pencil 8B‐scrawled gold electrode of an electrochemical quartz crystal microbalance (EQCM). The EQCM allowed us to quantitatively evaluate the catalytic activity of the pencil‐scrawled Au electrode. With increasing the mass of modified pencil powders, the peak potential for NADH oxidation shifted negatively, with maximum shift of ?0.35 V at saturated pencil modification; the NADH‐oxidation peak current density (j_p) was also notably increased, and the j_p at saturated pencil modification was found to be larger than those at conventional pencil 8B and bare Au electrodes. Sensitive amperometric detection of NADH was achieved at the gold electrode with saturated pencil modification, with low detection potential (0.4 V versus SCE), low detection limit (0.08 μmol L^?1) and wide linear range (0.2–710 μmol L^?1). The fluoroelectrochemical measurements of NADH at bare and pencil‐modified gold electrodes were also conducted with satisfactory results. The convenient and low‐cost modification of pencil powders on the Au electrode may have presented a new functional surface of the EQCM, which is recommended for wider applications to bioelectrochemical studies, especially in view of the EQCM's capability of providing abundant in situ information in relevant processes.     

反相高效液相色谱法分离测定复合维生素片剂中VB1,VB2,VB6和烟酰胺

采用NovaPak C18色谱柱(30 cm×3.9 mm,粒径10 μm),以(V(水)V(甲醇)V(冰乙酸)m(庚烷磺酸钠)=730 mL270 mL5 mL400 mg)为流动相,检测波长为280 nm,分离测定了复合维生素片剂中的VB1,VB2,VB6和烟酰胺,实验回收率分别为100.5%,96.8%,98.1%,102.0%,相对标准偏差RSD分别为0.8%,0.4%,0.5%,1.2%(n=5),检出限分别为39,4.2,4.7,10 ng.本法已用于复合维生素片剂中VB1,VB2,VB6和烟酰胺的分离和测定.     

Simple route to ferrocenylalkyl nucleobases. Antitumor activity in vivo

Ferrocenylalkyl nucleobases ( 1 – 14 ) were prepared via the reaction of the α‐(hydroxy)alkyl ferrocenes FcCHR(OH) (Fc = ferrocenyl; R = H, Me, Et, Ph) with thymine, cytosine, iodo‐cytosine and adenine in DMSO at 100 °C, yields being 50–80%. The antitumor activities of ferrocenylmethyl thymine ( 1 ) against solid tumor models, carcinoma 755 (Ca755) and Lewis lung carcinoma (LLC) were studied in vivo. Therapeutic synergism of antitumor activity against LLC was demonstrated in the case of combined application of compound 1 with anticancer drug cyclophosphamide. Copyright © 2009 John Wiley & Sons, Ltd.     

Theoretical study on the static and dynamic first-order hyperpolarisabilities of adenine tautomers

Static and dynamic electronic and vibrational first-order hyperpolarisabilities (β) of the lowest energy neutral adenine tautomers (amine forms A7 and A9) were obtained in gaseous and aqueous phases by using Hartree–Fock, Møller–Plesset second-order and fourth-order perturbation theory (MP2 and MP4-SDQ) and conventional and long-range corrected density functional theory methods with the Dunning's correlation-consistent cc-pVDZ, aug-cc-pVDZ, aug-cc-pVTZ and d-aug-cc-pVDZ basis sets. Frequency-dependent properties were calculated at the characteristic wavelength of the Nd:YAG laser (1064 nm) for the second harmonic generation and electro-optical Pockels effect nonlinear optical processes. Solvent effects were introduced under the polarised continuum model approximation. The electronic β^e values of the investigated isomers are noticeably affected by the theoretical level, basis set and solvation. In vacuum, the static and dynamic β^e values of A9 are greater than the corresponding data of A7, whereas the contribution of the solvent significantly enhances the hyperpolarisabilities of the A7 tautomer, resulting in β^e(A9)/β^e(A7) ratios between 0.5 and 0.6. The vibrational hyperpolarisabilities of the adenine tautomers are quite close to each other.     

Supramolecular synthons and pattern recognition in adenine amides – synthesis,structures and thermal properties

An effective method for the synthesis of novel adenine amides was developed and successfully implemented, leading to 4-propyloxy-N-(9H-purin-6-yl)benzamide (1) and 4-dodecyloxy-N-(9H-purin-6-yl)benzamide (2). The compounds were fully characterised by means of spectroscopic (¹H NMR, ¹³C NMR, FT-IR) and thermal (TG, DSC) analysis. The crystallographic analysis revealed that the formation of supramolecular chains relies on hydrogen bonding between amide functionalities. All supramolecular synthons found in the crystal structure of 1 were confirmed with the temperature-dependent IR method. The temperature-dependent IR method is useful in determining supramolecular interactions for compound 2, for which the crystal structure could not be obtained. A detailed analysis of temperature-dependent FT-IR spectra was used for the first time to identify the hydrogen bonds that exist in the solid state of our compounds; it can therefore be considered a promising method for the pattern recognition of hydrogen bonding in supramolecular chemistry.     

Structural characterisation of trimethylsilyl-protected DNA bases

The structures of the silylated DNA bases, bis(trimethylsilyl)thymine (1), bis(trimethylsilyl)cytosine (2), bis(trimethylsilyl)adenine (3) and tris(trimethylsilyl)guanine (4), have been determined. 1 is O-silylated and displays no intermolecular interactions. 2 is silylated at both exocylic O, N positions and forms a chain structure through intermolecular NH…O and NH…N hydrogen bonds. 3 contains two SiMe₃ groups, on the exocylic NH and endocyclic N⁹ position, respectively; of two independent molecules in the asymmetric unit, one dimerises through complementary NH…N hydrogen bonds, while the other forms a strained intramolecular hydrogen bond through the same pair of donor and acceptor centres. 4 incorporates N, N, O–SiMe₃ moieties and forms chains via bifurcated CH…O/N hydrogen bonds, while the NH function remains unexploited. The effects of silylation on these pyrimidine and purine ring structures are also discussed in comparison with the native bases.

The structures of the silylated DNA bases, bis-(trimethylsilyl)thymine (1), bis-(trimethylsilyl)cytosine (2), bis-(trimethylsilyl)adenine (3) and tris-(trimethylsilyl)guanine (4), have been determined. While 1 displays no intermolecular interactions. 2 forms a chain structure through intermolecular NH…O and NH…N hydrogen bonds, 3 incorporates two independent molecules in the asymmetric unit, one dimerises through complementary NH…N hydrogen bonds while the other forms a strained intramolecular hydrogen bond through the same pair of donor and acceptor centres and 4 forms chains via bifurcated CH…O/N hydrogen bonds while the NH function remains unexploited.     

A simple and highly sensitive DNAzyme-based assay for nicotinamide adenine dinucleotide by ligase-mediated inhibition of strand displacement amplification

Existing strategies for detecting nicotinamide adenine dinucleotide (NAD⁺) or other cofactors are commonly cumbersome and moderate sensitive. We report a novel DNAzyme-based visual assay strategy for NAD⁺ based on ligase-mediated inhibition of the strand displacement amplification (SDA). In the presence of NAD⁺, the SDA can be inhibited by the ligase reaction of two primers, which can initiate the SDA reaction in the case of no ligation, resulting in a dramatically decreasing yield of the SDA product, a G-quadruplex DNAzyme that can quantitatively catalyze the formation of a colored product. Therefore, the quantitative analysis for NAD⁺ can be achieved visually with high sensitivity. The developed strategy provides a simple colorimetric approach with high selectivity against most interferences and a detection limit as low as 50 pM. It also provides a universal platform for investigating cofactors or other related small molecules as well as quantifying the activity of DNA ligases.     

High quality drug screening by capillary electrophoresis: A review

High quality assays are needed in drug discovery to reduce the high attrition rate of lead compounds during primary screening. Capillary electrophoresis (CE) represents a versatile micro-separation technique for resolution of enzyme-catalyzed reactions, including substrate(s), product(s), cofactor(s) and their stereoisomers, which is needed for reliable characterization of biomolecular interactions in free solution. This review article provides a critical overview of new advances in CE for drug screening over the past five years involving biologically relevant enzymes of therapeutic interest, including transferases, hydrolases, oxidoreductases, and isomerases. The basic principles and major configurations in CE, as well as data processing methods needed for rigorous characterization of enzyme inhibition are described. New developments in functional screening of small molecules that modulate the activity of disease-related enzymes are also discussed. Although inhibition is a widely measured response in most enzyme assays, other important outcomes of ligand interactions on protein structure/function that impact the therapeutic potential of a drug will also be highlighted, such as enzyme stabilization, activation and/or catalytic uncoupling. CE offers a selective platform for drug screening that reduces false-positives while also enabling the analysis of low amounts of complex sample mixtures with minimal sample handling.