Diversely Functionalised Cytochalasins through Mutasynthesis and Semi-Synthesis

Mutasynthesis of pyrichalasin H from Magnaporthe grisea NI980 yielded a series of unprecedented 4′-substituted cytochalasin analogues in titres as high as the wild-type system (≈60 mg L⁻¹). Halogenated, O-alkyl, O-allyl and O-propargyl examples were formed, as well as a 4′-azido analogue. 4′-O-Propargyl and 4′-azido analogues reacted smoothly in Huisgen cycloaddition reactions, whereas p-Br and p-I compounds reacted in Pd-catalysed cross-coupling reactions. A series of examples of biotin-linked, dye-linked and dimeric cytochalasins was rapidly created. In vitro and in vivo bioassays of these compounds showed that the 4′-halogenated and azido derivatives retained their cytotoxicity and antifungal activities; but a unique 4′-amino analogue was inactive. Attachment of larger substituents attenuated the bioactivities. In vivo actin-binding studies with adherent mammalian cells showed that actin remains the likely intracellular target. Dye-linked compounds revealed visualisation of intracellular actin structures even in the absence of phalloidin, thus constituting a potential new class of actin-visualisation tools with filament-barbed end-binding specificity.     

Mono- and Di-Fucosylated Glycans of the Parasitic Worm S. mansoni are Recognized Differently by the Innate Immune Receptor DC-SIGN

The parasitic worm, Schistosoma mansoni, expresses unusual fucosylated glycans in a stage-dependent manner that can be recognized by the human innate immune receptor DC-SIGN, thereby shaping host immune responses. We have developed a synthetic approach for mono- and bis-fucosylated LacdiNAc (LDN-F and LDN-DF, respectively), which are epitopes expressed on glycolipids and glycoproteins of S. mansoni. It is based on the use of monosaccharide building blocks having carefully selected amino-protecting groups, facilitating high yielding and stereoselective glycosylations. The molecular interaction between the synthetic glycans and DC-SIGN was studied by NMR and molecular modeling, which demonstrated that the α1,3-fucoside of LDN-F can coordinate with the Ca²⁺-ion of the canonical binding site of DC-SIGN allowing for additional interactions with the underlying LDN backbone. The 1,2-fucoside of LDN-DF can be complexed in a similar manner, however, in this binding mode GlcNAc and GalNAc of the LDN backbone are placed away from the protein surface resulting in a substantially lower binding affinity. Glycan microarray binding studies showed that the avidity and selectivity of binding is greatly enhanced when the glycans are presented multivalently, and in this format Le^x and LDN-F gave strong responsiveness, whereas no binding was detected for LDN-DF. The data indicates that S. mansoni has developed a strategy to avoid detection by DC-SIGN in a stage-dependent manner by the addition of a fucoside to a number of its ligands.     

Discovery of Homobivalent Bitopic Ligands of the Cannabinoid CB2 Receptor**

Single chemical entities with potential to simultaneously interact with two binding sites are emerging strategies in medicinal chemistry. We have designed, synthesized and functionally characterized the first bitopic ligands for the CB₂ receptor. These compounds selectively target CB₂ versus CB₁ receptors. Their binding mode was studied by molecular dynamic simulations and site-directed mutagenesis.     

丙烯直接环氧化Cu基催化剂的研究进展与挑战

作为一种重要的化工原料,环氧丙烷年产量近千万吨,然而目前工业上制备环氧丙烷的方法仍然面临着成本高、副产物多以及污染严重等问题。直接氧气氧化法进行丙烯环氧化因为具有原子经济、环保等优点受到了越来越多的关注。但是,催化过程中丙烯的α-H和环氧丙烷都具有很高的活性,使得在高转化率的条件下提升环氧丙烷选择性成为一个巨大的挑战。研究者们发现相较于其他币族金属,Cu基催化剂表现出更优异的丙烯直接环氧化反应性能。本综述总结梳理了近年来关于Cu基催化剂催化丙烯直接环氧化反应的研究成果,聚焦于Cu基催化剂改性方法,并对Cu基催化剂依然存在的问题和挑战进行深入探讨。     

Theoretical modeling of the chemical synthesis and detonation performance of polynitrocubane derivatives

Theoretical work was performed based on experimental methods described in the literature to simulate and explore feasible routes for the synthesis of energetic octanitrocubane (ONC) and polynitrocubane derivatives. In respective gaseous and liquidous environments, using cubane as the raw material, ONC was successfully synthesized through carboxylation, amination, oxidation and nitration stages, and the related reaction energy barriers were simultaneously acquired. In particular, the polyparametric calibrated gaseous molecular formation enthalpy and the group additivity approach-estimated molecular density were incorporated using the Kamlet-Jacobs equation to evaluate the detonation performance of polynitrocubane derivatives. Some high-energy-density derivatives were found to have superior characteristics as compared with traditional hexagon (RDX) and octagon (HMX) explosives.     

Theoretical investigation on the structure and stability of some neutral noble gas compounds containing Xe-Xe bond

DFT calculations are performed to investigate the structure, stability, and nature of chemical bonding of some neutral noble gas insertion compounds containing a Xe-Xe bond; including HXeXeR, FXeXeR as well as RXeXeR (R = CN, NC, CCH, and BS). Geometry optimization of the considered molecules anticipate the existence of just four stable compounds (HXeXeCN, HXeXeNC, FXeXeCN, and FXeXeCCH); and rest of the molecules dissociate during the structural optimization. The results of NBO and AIM calculations show that a H(F)XeXeR molecule has a covalent H(F)-Xe bond in the H(F)XeXe⁺ fragment, which is bonded to R⁻ mainly through columbic interaction. Thermodynamic study indicates that all of the considered unimolecular dissociation channels for decomposition of H(F)XeXeR molecules to neutral fragments are both exothermic and exorergic; but dissociation to ionic species (H(F)XeXe⁺ and R⁻) is endothermic. Also kinetic study of the most probable dissociation reaction shows that FXeXeR molecules are metastable with respect to the global minimum F-R + 2Xe. Therefore, FXeXeCN molecule is more kinetically protected against the decomposition reaction than the other molecules and its experimental detection is more likely.     

Reduced eigensystem representation of the linear density-density response function

The linear density-density response function represents a formulation of the generalized density response of a molecular (or extended) system to arbitrary perturbing potentials. We have recently established an approach for reducing the dimension of the (in principle infinite) eigenspace representation (the moment expansion) and generalized it to arbitrary self-adjoint, positive-definite, and compact linear operators. Here, we present a modified representation—the reduced eigensystem representation—which allows to define a trivial criterion for the convergence of the approximation to the density response. By means of this novel eigensystem-like structure, the remarkable reduction of the dimensionality becomes apparent for the calculation of the density-density response function.     

分子凝胶:从结构调控到功能应用

作为一类典型软物质材料,近年来分子凝胶在生物医学、柔性电子设备、晶体控制生长、水体净化,以及3D打印材料、微纳米材料和高能量密度材料制备等领域表现出巨大的应用潜力,受到人们越来越多的关注。如何提高分子凝胶结构调控效率,拓展分子凝胶功能,促进分子凝胶实际应用已经成为新阶段分子凝胶研究的主要内容。本文结合本课题组的研究工作,从动态共价键调控分子凝胶力学性能、分子凝胶促进高品质有机晶体制备和高性能多孔高分子材料的分子凝胶(凝胶乳液)软膜板制备三个方面阐述分子凝胶的结构调控和功能化应用研究。在此基础上,简要展望分子凝胶研究的发展趋势。     

Host-Guest Chemistry of Truncated Tetrahedral Imine Cages with Ammonium Ions

Three shape-persistent [4+4] imine cages with truncated tetrahedral geometry with different window sizes were studied as hosts for the encapsulation of tetra-n-alkylammonium salts of various bulkiness. In various solvents the cages behave differently. For instance, in dichloromethane the cage with smallest window size takes up NEt₄⁺ but not NMe₄ ^{+ ,} which is in contrast to the two cages with larger windows hosting both ions. To find out the reason for this, kinetic experiments were carried out to determine the velocity of uptake but also to deduce the activation barriers for these processes. To support the experimental results, calculations for the guest uptakes have been performed by molecular mechanics’ simulations. Finally, the complexation of pharmaceutical interested compounds, such as acetylcholine, muscarine or denatonium have been determined by NMR experiments.     

Computational Insights into Allosteric Conformational Modulation of P-Glycoprotein by Substrate and Inhibitor Binding

The ATP-binding cassette (ABC) transporter P-glycoprotein (P-gp) is a physiologically essential membrane protein that protects many tissues against xenobiotic molecules, but limits the access of chemotherapeutics into tumor cells, thus contributing to multidrug resistance. The atomic-level mechanism of how substrates and inhibitors differentially affect the ATP hydrolysis by P-gp remains to be elucidated. In this work, atomistic molecular dynamics simulations in an explicit membrane/water environment were performed to explore the effects of substrate and inhibitor binding on the conformational dynamics of P-gp. Distinct differences in conformational changes that mainly occurred in the nucleotide-binding domains (NBDs) were observed from the substrate- and inhibitor-bound simulations. The binding of rhodamine-123 can increase the probability of the formation of an intermediate conformation, in which the NBDs were closer and better aligned, suggesting that substrate binding may prime the transporter for ATP hydrolysis. By contrast, the inhibitor QZ-Leu stabilized NBDs in a much more separated and misaligned conformation, which may result in the deficiency of ATP hydrolysis. The significant differences in conformational modulation of P-gp by substrate and inhibitor binding provided a molecular explanation of how these small molecules exert opposite effects on the ATPase activity. A further structural analysis suggested that the allosteric communication between transmembrane domains (TMDs) and NBDs was primarily mediated by two intracellular coupling helices. Our computational simulations provide not only valuable insights into the transport mechanism of P-gp substrates, but also for the molecular design of P-gp inhibitors.