Watching macromolecules diffuse at surfaces and under confinement

At the single-molecule level, this laboratory has been making direct measurements of polymer diffusion at and near surfaces. Parameters of special interest have been to understand (a) the role of molecular weight, N; (b) the role of surface coverage, which may range from dilute to saturated, and (c) the role of the surface, which may range from hard (a silicon wafer) to soft (a supported lipid bilayer), and (d) the use of external fields to direct the transport of small molecules through narrow surface channels that are one macromolecule thick.     

Compatibility of correlation‐consistent basis sets with a hybrid Hartree–Fock/density functional method

The present study examines the feasibility of combining the correlation‐consistent basis sets developed by Dunning and coworkers with the hybrid Hartree–Fock/density functional method B3LYP. Furthermore, extrapolation to the complete basis set (CBS) limit minimizes errors due to the presence of an incomplete basis set and can act as a rigorous test of the limitations of the B3LYP method. Equilibrium geometries, energies, and harmonic vibrational frequencies were determined for a series of well‐studied, yet computationally challenging, small inorganics and their respective ions. The results were then extrapolated to the CBS limit, where applicable, and compared to experiment. It was found that a union between the hybrid Hartree–Fock/density functional B3LYP method and Dunning's augmented correlation‐consistent basis sets gave results that were comparable to molecular orbital methods that explicitly account for electron correlation. Furthermore, the minimum basis set necessary to attain reasonable results for the systems studied was aug‐cc‐pVTZ. Upgrading to the aug‐cc‐pVQZ level and subsequent extrapolation to the CBS limit further improved the overall agreement with the experiment. ©1999 John Wiley & Sons, Inc. J Comput Chem 20: 207–216, 1999     

Effective atomic charges in alanine dipeptide

A new set of effective atomic charges of different conformers of alanine dipeptide is presented. These charges are obtained by fitting the electrostatic potential resulting from the ab initio SCF wave function of the system obtained in a 6-31G basis set. A specific fit procedure is used providing charges weakly dependent on the fit points as well as on the geometry of the molecule. It is shown that these charges retain a reasonable chemical meaning. ©1999 John Wiley & Sons, Inc. J Comput Chem 20: 473–482, 1999     

Correlated motions analysis from molecular dynamics trajectories: Statistical accuracy on the determination of canonical correlation coefficients

A numerical study of the accuracy on the determination of a unique global canonical correlation coefficient C between two groups of random variables is presented as a function of the number of variables of both groups (n and m, respectively), of the sampling size N and of the actual level of correlation C between the groups. The method used to estimate C has been already described (Briki, F.; Genest, D. Biophys Chem 1994, 52, 35–43; and J Biomol Struct Dynam 1995, 12, 1063–1082), and is implemented in the home made program TECOR. To check the accuracy on the estimation of C for given values of n, m, N, and C, samples of the random variables are synthesized (with known C), then TECOR is used to get an estimated value M of the global canonical coefficient, which is compared to the actual value C. Special attention is paid to the application of the method to the analysis from molecular dynamics simulation trajectories of concerted motions of two groups of atoms (not larger than about 20 atoms) in the course of internal deformation of biopolymers. It is found that there is a good agreement between M and C for moderate and high correlation (C≥0.35), provided that at least about 2000 configurations are stored during the molecular dynamics simulation. If C is smaller than 0.35, the method can overestimate its value if the number of configurations is not increased, especially for larger groups. ©1999 John Wiley & Sons, Inc. J Comput Chem 20: 1571–1576, 1999     

Characterization of tri-o-methylcellulose by one- and two-dimensional NMR methods

Tri-O-methylcellulose was prepared from partially O-methylated cellulose and its chemical shifts (¹H and ¹³C), and proton coupling constants were assigned using the following NMR methods: (1) One-dimensional ¹H and ¹³C spectra of the title compound were used to assign functional groups and to compare with literature data; (2) double quantum filtered proton–proton correlation spectroscopy (¹H, ¹H DQF-COSY) was used to assign the chemical shifts of the network of 7 protons in the anhydroglucose portion of the repeat unit; (3) the heteronuclear single-quantum coherence (HSQC) spectrum was used to establish connectivities between the bonded protons and carbons; (4) the heteronuclear multiple-bond correlation (HMBC) spectrum was used to connect the hydrogens of the methyl ethers to their respective sugar carbons; (5) the combination of HSQC and HMBC spectra was used to assign the ¹³C shifts of the methyl ethers; (6) all spectra were used in combination to verify the assigned chemical shifts; (7) first-order proton coupling constants data (J_H,H in Hz) were obtained from the resolution-enhanced proton spectra. The NMR spectra of tri-O-methylcellulose and other cellulose ethers do not resemble the spectra of similarly substituted cellobioses. Although the ¹H and ¹³C shifts and coupling constants of 2,3,6-tri-O-methylcellulose closely resemble those of methyl tetra-O-methyl-β-D -glucoside, there are differences with regard to the chemical shifts and the order of appearances of the resonating nuclei of the methyl ether appendages and the proton at position 4 in the pyranose ring. H4 in tri-O-methylcellulose is deshielded by the acetal system comprising the β-1→4 linkage, and it resonates downfield. H4 in the permethylated glucoside is not as deshielded by the equitorial O-methyl group at C4, and it resonates upfield. The order of appearance of the ¹H and ¹³C resonances in the spectra of the tri-O-methylcellulose repeat unit (from upfield to downfield) are H2 < H3 < H5 < H6a < H3a < H2a < pro R H6B < H4 < pro S H6A ≪ H1 and C6a < C3a < C2a < C6 < C5 < C4 < C2 < C3 ≪ C1, respectively. Close examination of the pyranose ring coupling constants of the repeat unit in tri-O-methylcellulose supports the ⁴C₁ arrangement of the glucopyranose ring. Examination of the proton coupling constants about the C5-C6 bond (J_5,6A and J_5,6B) in the nuclear Overhauser effect difference spectra revealed that the C6 O-methyl group is predominantly in the gauche gauche conformation about the C5-C6 bond for the polymer in solution. © 1999 John Wiley & Sons, Inc.* J Polym Sci A: Polym Chem 37: 4019–4032, 1999     

Synthesis and characterization of chitosan‐modified polymethyl methacrylate latex particles

Stable chitosan‐modified polymethyl methacrylate (PMMA) latex particles were prepared by using 2,2′‐azobis(2‐amidinopropane) dihydrochloride (V‐50) as the cationic initiator. The polymerization rate (R_p) is controlled by the V‐50 concentration ([V‐50]) and R_p is less sensitive to the chitosan concentration ([C]) used in the synthesis work. The reaction system follows Smith–Ewart Case III kinetics due to the relatively large particles produced. The zeta potential data show that the isoelectric point (pI) of the latex particles is 10.7. The amounts of V‐50 (C_V‐50) and chitosan (C_c) ultimately incorporated into the particles correlate reasonably well with [V‐50] and [C], respectively. At pH 7, the quantity of the negatively charged bovine serum albumin (BSA, pI = 4.8) adsorbed on the positively charged chitosan‐free particles (Q) via the electrostatic interaction increases with increasing C_V‐50. However, Q is relatively insensitive to changes in C_c. This result implies that only the outermost region of the hairy chitosan‐modified particles is available for adsorption of the relatively large protein species. Colloidal stability shows a significant influence on the BSA adsorption process. © 1999 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 37: 1489–1499, 1999     

Details of surface features in aromatic polyamide reverse osmosis membranes characterized by scanning electron and atomic force microscopy

In the present article, some new events on the surface morphology of the aromatic polyamide thin‐film‐composite (TFC) membranes were demonstrated in conjunction with their inherent chemical nature. In addition, the detailed, quantitative understanding of the microscopic surface features was shown to be essential in controlling the water permeability and eventually developing the high performance membranes. The surface roughness and the surface area were mainly affected by the existence or nonexistence of the crosslinking and/or the free amide groups not pertinent to the formation of the hydrogen bonding, which in turn contributed to the water permeability. © 1999 John Wiley & Sons, Inc. J Polym Sci B: Polym Phys 37: 1429–1440, 1999     

基于多小波变换的红外目标探测与识别

针对光电联合变换相关器目标识别的实际应用,对待测红外目标图片进行多小波变换,并利用模极大值法提取其边缘.通过获取更多的轮廓信息,从而提高对目标的识别能力.计算机模拟了常用于红外目标处理的多小波GHM和SA4,实验结果表明:基于GHM多小波提取的边缘能获取大量的图像轮廓信息,其识别结果明显优于SA4多小波.将目标原图的光学相关探测结果与基于GHM多小波提取的边缘图像光学相关探测结果进行比较发现,经多小波预处理后的边缘图像能有效增强相关峰强度.     

The Coulomb Hole of the Ne Atom

We analyze the Coulomb hole of Ne from highly-accurate CISD wave functions obtained from optimized even-tempered basis sets. Using a two-fold extrapolation procedure we obtain highly accurate results that recover 97 % of the correlation energy. We confirm the existence of a shoulder in the short-range region of the Coulomb hole of the Ne atom, which is due to an internal reorganization of the K-shell caused by electron correlation of the core electrons. The feature is very sensitive to the quality of the basis set in the core region and it is not exclusive to Ne, being also present in most of second-row atoms, thus confirming that it is due to K-shell correlation effects.     

Dynamical current–current correlation in two-dimensional parabolic Dirac systems

We theoretically investigate the current–current correlation of the two-dimensional (2D) parabolic Dirac system in hexogonal lattice. The analytical expressions of the random phase approximation (RPA) susceptibility, Ruderman–Kittel–Kasuya–Yosida (RKKY) Hamiltonian, and the diamagnetic orbital susceptibility in noninteracting case base on the density–density or current–current correlation function are derived and quantitatively analyzed. In noninteracting case, the dynamical polarization within RPA, and spin transverse susceptibility as well as the RKKY interaction (when close to the half-filling) are related to the current–current response in the 2D parabolic Dirac systems. Both the cases of anisotropic dispersion and isotropic dispersion are discussed.