Computational Drug Repurposing Based on a Recommendation System and Drug–Drug Functional Pathway Similarity

Drug repurposing identifies new clinical indications for existing drugs. It can be used to overcome common problems associated with cancers, such as heterogeneity and resistance to established therapies, by rapidly adapting known drugs for new treatment. In this study, we utilized a recommendation system learning model to prioritize candidate cancer drugs. We designed a drug–drug pathway functional similarity by integrating multiple genetic and epigenetic alterations such as gene expression, copy number variation (CNV), and DNA methylation. When compared with other similarities, such as SMILES chemical structures and drug targets based on the protein–protein interaction network, our approach provided better interpretable models capturing drug response mechanisms. Furthermore, our approach can achieve comparable accuracy when evaluated with other learning models based on large public datasets (CCLE and GDSC). A case study about the Erlotinib and OSI-906 (Linsitinib) indicated that they have a synergistic effect to reduce the growth rate of tumors, which is an alternative targeted therapy option for patients. Taken together, our computational method characterized drug response from the viewpoint of a multi-omics pathway and systematically predicted candidate cancer drugs with similar therapeutic effects.     

A Class of Bidimensional FMRA Wavelet Frames

This paper addresses the construction of wavelet frame from a frame multiresolution analysis （FMRA） associated with a dilation matrix of determinant ±2. The dilation matrices of determinant ±2 can be classified as six classes according to integral similarity. In this paper, for four classes of them, the construction of wavelet frame from an FMRA is obtained, and, as examples, Shannon type wavelet frames are constructed, which have an independent value for their optimality in some sense.     

一个关于高柔结构顺风向抗风设计中考虑地震作用组合的概率模型及求解

基于概率方法建立了高柔结构顺风向抗风设计中,考虑地震作用组合的总水平荷载的计算模型并进行了求解．在基于Turkstra准则的具体组合分析中,考虑了风和地震作用作为离散随机过程的发生概率以及风速和地面加速度的概率分布特征,并按照随机变量及相应函数的概率密度关系,得到了风和地震作用的概率密度分布．后利用卷积方法,分析探讨了结构抗风设计中地震作用的组合,并给出了实际的高柔结构算例．该研究反映对于水平荷载由风荷载起控制作用的高柔结构,最大水平荷载验算中,考虑风和地震作用后组合的总荷载可能较抗震设计中考虑了风荷载组合的结果更为不利．     

组合算法及其应用

提出了在组合算法设计和组合算法选择方面所应当遵循的三个原则,即通用性、可计算性和较少的信息冗余量,并初步分析了它们之间的相互关系.通过分析,提示了组合算法的设计方法,改进方向和优化技术.     

一种多视点视频自动颜色校正系统

针对多视点视频系统中视点间图像颜色不一致的问题,提出了一种多视点视频自动颜色校正系统。通过求取目标图像和源图像间的颜色校正矩阵,判断其是否满足全局校正的要求;对不满足要求的图像,通过图像分割和K-L变换(Karhunen-Loeve transform),建立起目标图像和源图像中各分割区域间的局部映射关系,并通过感兴趣区域匹配,来实现对源图像的校正,最后通过视频跟踪技术实现对视频图像的校正。以标准的多视点测试图像集为例,通过将新方法与直方图匹配、全局一维线性校正算法等进行比较,表明新方法能消除匹配失真的影响,且具有较好的颜色校正效果。研究结果表明该系统可以很好地揭示图像间的颜色变化关系,并且具有很好的内容自适应性,是一种有效的多视点视频图像系统颜色校正方法。     

不同喷嘴组合超高压射流破岩钻进特性分析

本文对不同喷嘴组合方式时超高压射流井底流场特性进行数值模拟.根据得出的井底流场的速度矢量图和井底压力分布图,分析超高压钻头喷嘴组合形式对流场结构及钻进效果的影响.结果表明,三个垂直的边喷嘴组合破岩效率较高,但清洗井底效果不佳,冲蚀井壁严重;中心加-个喷嘴可解决清洗井底及冲蚀井壁的问题,但要求高压流体排量增加;两个垂直边喷嘴与-个中心倾斜喷嘴的组合及-个垂直边喷嘴和-个中心倾斜喷嘴的组合流场结构对钻进较为有利.     

相似剩余格及其对应逻辑系统的完备性

引入了相似剩余格的概念,讨论了剩余格上相似算子和等价算子的关系,并得到了真值剩余格和相似剩余格相互转化的方法.其次,研究了相似剩余格上的相似滤子,利用相似滤子刻画了可表示的相似剩余格.最后,引入了相似剩余格对应的逻辑系统,证明了其完备性定理,并得到了其成为半线性逻辑的条件.     

Symmetries and Exact Solutions of the Breaking Soliton Equation

With the aid of the classical Lie group method and nonclassical Lie group method, we derive the classical Lie point symmetry and the nonclassical Lie point symmetry of (2+1)-dimensional breaking soliton (BS) equation. Using the symmetries, we find six classical similarity reductions and two nonclassical similarity reductions of the BS equation. Varieties of exact solutions of the BS equation are obtained by solving the reduced equations.     

黄芩的1H NMR指纹图谱研究

利用PFT-NMR 核磁共振波谱仪测定了黄芩提取物的¹H NMR图谱,对黄芩提取物的¹H NMR指纹图谱进行了解析,并与黄芩苷元、千层纸素A、汉黄芩素和黄芩苷进行了比较,获得了黄芩提取物的特征峰,并利用向量夹角法计算了不同指纹图谱的相似度;结果表明不同黄芩提取物的¹H NMR指纹图谱都显示出黄酮类有效成分特征共振峰,并具有很好的重现性和高度的特征性,可以成为黄芩真伪鉴别的依据;不同黄芩的¹H NMR指纹图谱的相似度计算结果定量地评价了不同指纹图谱的相似性.     

激光相干合成中单元的相位和振幅波动对合成光束远场分布的影响

运用傅里叶光学分析法推导出系统抖动造成单个光源的相位和振幅发生波动时的远场光强表达式,以1维阵列为例分析了系统抖动对远场的影响.研究表明:随着参与合束的发光单元数目的增加,尖峰变锐,能量更集中;系统抖动引起了远场峰值光强的减少.出现了本底现象,破坏了远场的对称性和光束质量;激光阵列单个光源的相位随机抖动应该控制在3 π/8范围内;相干合束发光单元数目越多,系统抖动对远场的影响越小.