Molecular Design for Reversing the Photoswitching Mode of Turning ON and OFF DNA Hybridization

A new photoswitch for DNA hybridization involving para‐substituted azobenzenes (such as isopropyl‐ or tert‐butyl‐substituted derivatives) with L ‐threoninol as a linker was synthesized. Irradiation of the modified DNA with visible light led to dissociation of the duplex owing to the destabilization effect of the bulky substituent on the trans‐azobenzene. In contrast, trans‐to‐cis isomerization (UV light irradiation) facilitated duplex formation. The direction of this photoswitching mode was entirely reversed relative to the previous system with an unmodified azobenzene on D ‐threoninol whose trans form turned on the hybridization, and cis form turned it off. Such reversed and reversible photoswitching of DNA hybridization was directly demonstrated by using fluorophore‐ and quencher‐attached oligonucleotides. Furthermore, it was revealed that the cis‐to‐trans thermal isomerization was greatly suppressed in the presence of the complementary strand owing to the formation of the more‐stable duplex in the cis form.     

Absorption spectra of azobenzenes simulated with time‐dependent density functional theory

Using time‐dependent density functional theory and the polarizable continuum model, we have simulated the absorption spectra of an extended series of azobenzene dyes. First, we have determined a theoretical level optimal for this important class of dyes, and it turned out that a C‐PCM‐CAM‐B3LYP/6‐311+G(d,p)//C‐PCM‐B3LYP/6‐311G(d,p) approach represents an effective compromise between chemical accuracy and computational cost. In a second stage, we have compared the theoretical and experimental transition energies for 46 n → π^☆ and 141 π → π^☆ excitations. For the full set, that spans over a 302–565 nm domain, we obtained a mean absolute deviation of 13 nm (0.10 eV) and a linear correlation coefficient of 0.95, illustrating the accuracy of our approach, though some significant outliers pertained. In a last step, the impact of several modifications, that is, trans/cis isomerization, variation of the acidity of the medium and azo/hydrazo tautomerism have been modeled with two functionals. © 2010 Wiley Periodicals, Inc. Int J Quantum Chem, 2010     

Light‐Induced Reversible Reconfiguration of DNA‐Based Constitutional Dynamic Networks: Application to Switchable Catalysis

The light‐induced reversible and cyclic reconfiguration of constitutional dynamic networks, consisting of supramolecular nucleic acid structures as constituents and a photoisomerizable trans/cis‐azobenzene‐functionalized nucleic acid as the trigger is demonstrated. In addition, the cyclic photochemical reconfiguration of the constitutional dynamic networks guides the switchable on/off operation of an emerging hemin/G‐quadruplex DNAzyme.     

偶氮苯取代乙炔功能化合物的合成与表征

采用偶氮偶联和金属钯催化偶联反应法,合成了一系列非线性光学基团直接取代乙炔化合物,其结构经^1HNMR,IR,DSC及元素分析等表征。     

On the Low-Lying Electronically Excited States of Azobenzene Dimers: Transition Density Matrix Analysis

Azobenzene-containing molecules may associate with each other in systems such as self-assembled monolayers or micelles. The interaction between azobenzene units leads to a formation of exciton states in these molecular assemblies. Apart from local excitations of monomers, the electronic transitions to the exciton states may involve charge transfer excitations. Here, we perform quantum chemical calculations and apply transition density matrix analysis to quantify local and charge transfer contributions to the lowest electronic transitions in azobenzene dimers of various arrangements. We find that the transitions to the lowest exciton states of the considered dimers are dominated by local excitations, but charge transfer contributions become sizable for some of the lowest ππ* electronic transitions in stacked and slip-stacked dimers at short intermolecular distances. In addition, we assess different ways to partition the transition density matrix between fragments. In particular, we find that the inclusion of the atomic orbital overlap has a pronounced effect on quantifying charge transfer contributions if a large basis set is used.     

The role of crosslinking and polarity in the dark relaxation of azobenzene-based,polymer-stabilised cholesteric liquid crystals

Prior examinations have reported that polymer stabilisation of azobenzene-based cholesteric liquid crystal (CLC) mixtures can reduce the time necessary for complete colour restoration in the dark from three days to as few as five minutes. This work extends upon these prior examinations by exploring and elucidating the role of crosslinker concentration and monomer polarity on the colour restoration of a representative CLC mixture composed of a high HTP bis(azo) binapthanyl chiral dopant (QL76) mixed into the cyanobiphenyl nematic liquid crystal host MDA-00-1444. The impact of these variables was unexpectedly convoluted. In all the formulations examined here, polymer stabilisation dramatically reduces the time for complete colour restoration of the starting reflection notch. In mixtures based on nonpolar liquid crystal monomers, increasing the crosslinker concentration reduces the time necessary for complete colour restoration. However, the dependence on crosslinker concentration reverses in mixtures composed from polar liquid crystal monomers in which increasing the crosslinker concentration serves to increase the time necessary for complete colour restoration.     

Poly(N‐Bromobenzene‐1,3‐Disulfonylamide), N,N,N′,N′‐Tetrabromobenzene‐1,3‐Disulfonylamide and DABCO‐Bromine Complex: As Novel Reagents for the Oxidative Coupling of Thiols to Disulfides

An efficient method for the oxidative coupling of thiols to their corresponding disulfides by new reagents poly(N‐bromobenzene‐1,3‐disulfonylamide) PBBS , N,N,N′,N′‐tetrabromobenzene‐1,3‐disulfonylamide TBBDA and DABCO‐bromine complex is described. The reaction was applicable to a variety of thiols with high chemoselectivity.     

偶氮苯基两亲性聚合物的自组装行为研究进展

偶氮苯基两亲性聚合物结合了偶氮苯基团的光响应、酶响应、主客体识别特性和两亲性聚合物的自组装特性,能够在选择性溶剂中发生聚合物可控自组装行为,这使得其在药物控释、纳米技术和生物医学材料等领域受到了广泛的关注。本文从结构类型和合成方法出发,综述了新型偶氮苯基两亲性聚合物在溶液中的自组装研究进展,并对该领域的发展前景进行了展望。     

Crown‐ether and azobenzene‐containing liquid crystalline polymers: An influence of macromolecular architecture on optical properties and photo‐orientation processes

A series of novel crown ether‐containing photochromic comb‐shaped liquid crystalline polyacrylates with different macromolecular structure of side groups were synthesized and investigated. Phase behavior, optical and photo‐optical properties of thin spin‐coated films of these polymers were studied. A special attention was paid to a comparative study of the photo‐orientation phenomena occurring in the polymer films under a polarized light action. It was shown that complex formation with the potassium ions results in the decrease in degree of the photoinduced order that can be used for the creation of new materials for sensor devices. © 2010 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2011