Synthesis and crystal structure of a novel chiral compound prepared from (-)-borneol as a natural chiral auxiliary

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Synthesen zweizähniger P‐Donor/Sn‐Akzeptor‐Liganden: Koordinationsstudien mit Cp*Rh(CO)2 und CpRh(C2H4)2

Alternative Ligands. XXXV. Syntheses of Bidentate P‐Donor/Sn‐Acceptor Ligands: Coordination Experiments with Cp*Rh(CO)₂ and CpRh(C₂H₄)₂ Donor/acceptor ligands Me₂Sn(CH₂CH₂PMe₂)₂ ( 1 ) and Me₂Sn(OCH₂PMe₂)₂ ( 2 ) have been prepared by radical reaction of Me₂PVi with Me₂SnH₂ and by substitution of chlorine in Me₂SnCl₂ or of ethoxy groups in Me₂Sn(OEt)₂ by MOCH₂PMe₂ (M = Li, Na) and HOCH₂PMe₂, respectively. 2 cannot be isolated in pure form from the product mixture because, due to condensation reactions, the “ladder structure” [Me₂Sn(OCH₂PMe₂)₂OSnMe₂]₂ ( 3 ) is formed. The molecular structure of 3 was determined by X‐ray diffraction studies of single crystals. Attempts to produce the thiophosphoryl derivative of 3 result in the degradation of the ladder structure giving the thermally labile phosphane sulfide Me₂Sn(OCH₂P(S)Me₂)₂. Ligands 1 and 2 besides Me₂PCH₂CH₂SnMe₃ ( 4 ) have been used for the preparation of rhodium(I) complexes from Cp*Rh(CO)₂ ( 5 ) or CpRh(C₂H₄)₂ ( 10 ) as educts. The thermal reaction of 5 with 4 yields Cp*Rh(CO)PMe₂CH₂CH₂SnMe₃ ( 6 ), that of 5 with 1 a mixture of the mononuclear derivative Cp*Rh(CO) · PMe₂CH₂CH₂SnMe₂CH₂CH₂PMe₂ ( 7 ) and the binuclear complex [Cp*Rh(CO)PMe₂CH₂CH₂]₂SnMe₂ ( 8 ). The related system [Cp*Rh(CO)PMe₂CH₂O]₂SnMe₂ produced by reaction of 5 with 2 can only be detected in solution but, because of some side‐products, was not fully characterized. From 10 and 4 a mixture of mono‐ and disubstituted products, CpRh(C₂H₄)PMe₂CH₂CH₂SnMe₃ ( 11 ) and CpRh(PMe₂CH₂CH₂SnMe₃)₂ ( 12 ), is obtained. Reaction of 1 with 10 yields a mixture of the complexes CpRh(C₂H₄)PMe₂CH₂CH₂SnMe₂CH₂CH₂PMe₂ ( 13 ) and CpRh(Me₂CH₂CH₂)₂SnMe₂ ( 14 ). Some of the NMR data (¹³C, δδ_Sn) of 14 can be interpreted in terms of the expected Rh → Sn interaction. A definite proof by X‐ray diffraction on single crystals, so far, was not possible.     

Crystal Structure of the [(C5H4BMe2)2Fe]‐4,4′‐bipyridine Polymer from High Resolution X‐Ray Powder Diffraction

The crystal structure of [(C₅H₄BMe₂)₂Fe]‐4,4′‐bipyridine [ 2 · bipy]_n has been determined by the method of simulated annealing from high resolution X‐ray powder diffraction at room temperature. The compound is of interest, because it proves that highly ordered organometallic macromolecules can be formed in the solid state via the self‐assembly of N–B‐donor‐acceptor bonds. [ 2 · bipy]_n crystallizes in the triclinic space group, P 1, Z = 2, with unit cell parameters of a = 8.3366(2) Å, b = 11.4378(3) Å, c = 12.6740(5) Å, α = 112.065(2)°, β = 108.979(1)°, γ = 90.551(2)°, and V = 1047.06(6) ų. For the structure solution of [ 2 · bipy]_n 11 degrees of freedom (3 translational, 3 orientational, 5 torsion angles) were determined within several hours, demonstrating that the crystal packing and the molecular conformation of medium sized (< 50 non‐hydrogen atoms) coordination compounds can nowadays be solved routinely from high resolution powder diffraction data.     

Photochromism and decolorization controlled by auxiliary ligands of complexes derived from 1‐methyl‐4,4′‐bipyridinium cation

Three 1‐methyl‐4,4′‐bipyridinium (MQ⁺)‐based complexes, {[Cd(MQ)(p‐BDC)Br]?H₂O}_n ( 1 ), {[Cd(MQ)(m‐BDC)(H₂O)Br]?3H₂O}_n ( 2 ) and Cu(MQ)Br₂ ( 3 ) (p‐H₂BDC = 1,4‐benzenedicarboxylic acid, m‐H₂BDC = 1,3‐benzenedicarboxylic acid), have been synthesized and structurally characterized. Compounds 1 and 2 are one‐dimensional coordination polymers constituted of one coordinated MQ⁺ cation, one coordinated Br^? ion and chains of Cd²⁺ ions connected by deprotonated BDC^2? units, which both have photochromism but different decolorization behaviors. The structures and photoresponsive behaviors controlled by auxiliary ligands have been explored. Compound 3 is constituted of one Cu⁺ center, one MQ⁺ ligand and two coordinated Br^? ions in a ‘V’ configuration, exhibiting no photochromism.     

Acid-sensitive auxiliary assisted atypical diubiquitin synthesis exploiting thiol-ene coupling

Atypical ubiquitin (Ub) chains are generally involved in intracellular physiological processes, while the molecular mechanisms underlying their regulation remain unclear. In this work, we report an acid-sensitive auxiliary group based bifunctional handle that can prepare Lys27-, Lys29- and Lys33-diUb analogs by thiol-ene coupling (TEC) in combination with native chemical ligation (NCL). A prominent advantage of this method is the rapid and effective removal of acid-sensitive auxiliary groups after the formation of the isopeptide bond mimic. Collectively, this work illustrates the utility of the new strategy in the simple and efficient production of homogeneous atypical diUb analogs for biochemical and biophysical studies.     

Synthesis,crystal structure studies and solvatochromic behaviour of two 2‐{5‐[4‐(dimethylamino)phenyl]penta‐2,4‐dien‐1‐ylidene}malononitrile derivatives

The synthesis, crystal structure studies and solvatochromic behavior of 2‐{(2E,4E)‐5‐[4‐(dimethylamino)phenyl]penta‐2,4‐dien‐1‐ylidene}malononitrile, C₁₆H₁₅N₃ (DCV[3]), and 2‐{(2E,4E,6E)‐7‐[4‐(dimethylamino)phenyl]hepta‐2,4,6‐trien‐1‐ylidene}malononitrile, C₁₈H₁₇N₃ (DCV[4]), are reported and discussed in comparison with their homologs having a shorter length of the π‐conjugated bridge. The compounds of this series have potential use as nonlinear materials with second‐order effects due to their donor–acceptor structures. However, DCV[3] and DCV[4] crystallized in the centrosymmetric space group P2₁/c which excludes their application as nonlinear optical materials in the crystalline state. They both crystallize with two independent molecules having the same molecular conformation in the asymmetric unit. The series DCV[1]–DCV[4] demonstrated reversed solvatochromic behavior in toluene, chloroform, and acetonitrile.     

Molecular Lipophilicity Calculations of Chemically Heterogeneous Chemicals and Drugs on the Basis of Structural Similarity and Physicochemical Parameters

Abstract

QSARs based on molecular polarizability (α) and H-bond acceptor factors (∑C_a) as independent variables provided good predictability of octanol/water partition coefficients (P) for chemicals and drugs. However, for some molecules containing few functional groups, the calculated values deviated significantly from those observed. This approach gave good results when applied to a set of 138 chemicals and drugs previously studied by Mannhold and Dross who compared other methods to calculate log P values.

At the same time, three variations on a molecular similarity approach were pursued. In this study, a large training set with experimentally determined octanol/water partition coefficients (P) was searched for structures closely related to the compound-of-interest. The most successful of these variations took the mean log P value of few most closely related compounds after each was adjusted for differences between their and the compound-of-interest's polarizabilities (α) and H-bond acceptor capacities (∑C_a).     

The Interplay between Solvation and Stacking of Aromatic Rings Governs Bright and Dark Sites of Benzo[g]coumarins

Coumarins are classic, strongly polarized fluorophores with multiple applications, and significant efforts have been put into modifying their emission characteristics and elucidating their photophysics. Expecting that π-expansion of these donor–acceptor chromophores could modify their ground- and excited-state characteristics, the authors performed combined, detailed photophysical and computational studies of linearly π-expanded coumarins, that is, 8-dialkylamino-3-carboxyalkyl-benzo[g]coumarins. The investigation led to the conclusion that emission is only possible thanks to the stabilizing effect of the solvent and that breaking of the lactone ring leads to the conical intersection with the ground state and induces the radiationless decay of the electronic excitation. Aiming at the fine-tuning the excited state properties through the construction of covalently linked dye assemblies, the authors designed and synthesized a new bis(benzo[g]coumarin), built from two similar moieties that exhibit different degrees of polarization due to the electron donor at position 8: one possesses a dialkylamino, and the other a weaker amide donor. Comprehensive studies have shown that the observed weak fluorescence of the system is the result of the interplay between the solvation-induced separation of the benzo[g]coumarin moieties, which stabilizes the emitting locally excited singlet state and the π-stacking interactions, favoring their sandwiched orientation and leading to the non-emissive charge-transfer state.     

Chain Folding Controlled by an Isomeric Repeat Unit: Helix Formation versus Random Aggregation in Acetylene‐Bridged Carbazole–Bipyridine Co‐Oligomers

An unprecedented, positional effect of the isomeric repeat unit on chain folding in donor–acceptor‐linked oligomers, which contain alternating bipyridine and carbazole moieties that are connected through an acetylinic linkage, is reported. 4,4′‐Linked oligomer 1 adopts an intrachain helical conformation (CD‐active) in CHCl₃/MeCN (20:80 v/v), whereas oligomer 2 , which contains an isomeric 6,6′‐linkage, forms interchain randomly coiled aggregates (CD‐inactive). The substitution position plays a significant role in controlling the variations in electronic effects and dipole moments around the bipyridyl moiety, which are responsible for this observed phenomenon. Two model compounds of oligomers 1 and 2 ( 3 and 4 , respectively) were prepared and their properties were compared. A systematic investigation of the photophysical and CD properties of these structures, as well as theoretical studies, support our conclusions.