Synthesis and Biological Activity of Short Interfering RNAs Having Several Consecutive Amide Internucleoside Linkages

The success of RNA interference (RNAi) as a research tool and potential therapeutic approach has reinvigorated interest in chemical modifications of RNA. Replacement of the negatively charged phosphates with neutral amides may be expected to improve bioavailability and cellular uptake of small interfering RNAs (siRNAs) critical for in vivo applications. In this study, we introduced up to seven consecutive amide linkages at the 3′-end of the guide strand of an siRNA duplex. Modified guide strands having four consecutive amide linkages retained high RNAi activity when paired with a passenger strand having one amide modification between its first and second nucleosides at the 5′-end. Further increase in the number of modifications decreased the RNAi activity; however, siRNAs with six and seven amide linkages still showed useful target silencing. While an siRNA duplex having nine amide linkages retained some silencing activity, the partial reduction of the negative charge did not enable passive uptake in HeLa cells. Our results suggest that further chemical modifications, in addition to amide linkages, are needed to enable cellular uptake of siRNAs in the absence of transfection agents.     

约束下多子女家系数据重组率的最大似然估计

本文针对相型信息未知的三回交家系,讨论了在自然的序约束下重组率的估计问题.考虑了多后代数据的后代表型分类问题,给出了后代表型分类数的一个具体公式.基于表型分类所得数据,采用约束EM算法(REM)估计了两位点重组率.鉴于交换干扰的存在可能会影响到基因定位的精度,基于该估计,进一步考虑了有关生物体基因组中交换干扰的统计推断问题.实例和模拟研究均显示REM算法要优于无约束算法,并证实了多后代家庭会提供更多连锁信息这一观点.     

外商直接投资技术溢出机制研究——基于江苏省制造业面板数据的实证分析

本文利用2000-2007年江苏省制造业的面板数据,对外商直接投资水平溢出效应和垂直溢出效应进行了检验。结果表明,江苏省外商直接投资存在显著的水平溢出效应、后向溢出效应和前向溢出效应,但水平溢出效应较垂直溢出效应更为明显。并且水平溢出效应和前向溢出效应显示为边际递减,而后向溢出效应的影响是持久的。     

Relaxed energetic maps of κ‐carrabiose: A DFT study

The B3LYP density function was used with the 6‐31G(d) basis set to perform relaxed energetic contour maps of the charged form of κ‐carrabiose in the gas phase and for the neutral form first in the gas phase and then by simulating the presence of water as solvent using the Onsager model. Only one starting conformation has been considered to perform all the calculations. Rigid energetic maps have been then constructed either by addition of diffuse or polarization functions to the basis set obtaining in that way 6‐31+G(d)//6‐31G(d), 6‐31+G(d,p)//6‐31G(d), and 6‐311++G(d,p)//6‐31G(d) energetic maps that have been carefully examined. The obtained structures corresponding to the lower energy conformers have been then fully optimized using different basis sets with the B3LYP method, a reversion in term of energy has been observed for the two first minima in the case of the charged disaccharide in the gas phase, this was attributed to the large grid of 30° that could lead to the exclusion of an intermediate value corresponding to the real minimum of energy. We thus suggest that after establishing potential energy maps it is essential to proceed to full optimizations of the lower energy conformers. Calculations using the more accurate correlated method MP2 with the 6‐31G(d) basis set have also been performed for conformers of the two disaccharides in the gas phase. © 2010 Wiley Periodicals, Inc. J Comput Chem 2010     

Semiquantitative analysis of isomeric oligosaccharides by negative-ion mode UV-MALDI TOF postsource decay mass spectrometry and their fragmentation mechanism study at N-acetyl hexosamine moiety

Postsource decay (PSD) spectra of isomeric neutral lactooligosaccharide mixtures were measured from the chlorinated molecules [M + Cl]- by negative-ion mode ultraviolet matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (UV-MALDI TOF MS) to estimate quantitatively the mixing ratios in their mixtures. The PSD ions specific to each isomeric structure were used to distinguish the linkage and branching isomers, and the molar ratios of the isomers were estimated from their ion abundances. The relative ion abundances changed linearly in the PSD spectra of the mixtures of the isomers as their molar ratio was varied in the analyte solutions. Therefore, the molar ratios of the isomers in the analyte mixtures could be estimated semiquantitatively. In addition, we studied their fragmentation mechanisms in N-acetyl hexosamines such as GlcNAc, which enabled us to quantitatively analyze the structures of the isomers of lactooligosaccharides. The conjugated systems elongate in the chemical species of the Z-type fragmentation on the 3-linked GlcNAc owing to the acetoamido groups at the C-2 positions, which made the chemical species of the Z-type ions stable. The glycosyl bonds of the front of GlcNAc cleaved easily as a C-type fragmentation because the negative charge at the anomeric position could be delocalized to the carbonyl oxygen atom at the acetoamido group of GlcNAc. These factors caused the stabilization of the chemical species of the C/Z fragment ions produced by the double cleavage around GlcNAc.     

电动机-弹性连杆机构系统的动态方程及其响应

针对三相交流电机转子振动偏心时不均匀气隙的气隙磁场,分析其实际运行状态的机电耦合关系．建立以电机横振、扭振为节点位移的电机单元,应用有限单元法建立含电机电磁参数和弹性连杆机构结构参数的系统动态方程,并根据该方程对系统的动态响应进行仿真计算和分析,且通过实验进行验征,表明所建方程较好地反映丁系统动态性能与其电磁参数、结构参数之间的关系．     

Meta‐linked and para‐linked water‐soluble poly(arylene ethynylene)s with amino acid side chains: Effects of different linkage on Hg2+ ion sensing properties in aqueous media

Water‐soluble, meta‐ and para‐linked poly(arylene ethynylene)s containing L ‐aspartic acid‐functionalized fluorene units (P1 and P2) and their model compounds (M1 and M2) have been synthesized, and their photophysical properties and fluorescent sensing properties were investigated in aqueous solution. P1 and M1 with the meta‐linkage show blue‐shifted absorption and emission spectra, and decreased photoluminescence quantum yields compared with those of P2 and M2 with para‐linkage. Their absorption and fluorescence spectra are pH dependent perhaps due to the aggregation of the polymer chains at low pH values. In buffer solutions, both polymers and their model compounds exhibit the excellent selectivity and sensitivity to Hg²⁺ over other common metal ions. Furthermore, the quenching constant and detection limit of P1 are determined to be 1.04 × 10⁷ M^?1 and 10 nM, and show the higher sensitivity compared to P2. Further comparison of their model compounds reveal that the sensitivity and quenching efficiency of M1 is also higher than that of M2, indicating that the meta‐linkage pattern plays a key role in improving their Hg²⁺ ion sensing properties. In addition, both meta‐ and para‐linked polymers exhibit the higher quenching efficiency than their model compounds due to the amplified fluorescence response of conjugated polymer. © 2012 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2012     

Influence of different linkage groups in biphenyl mesogenic core on phase behaviors of mesogen‐jacketed liquid crystalline polymers

The work focuses on the design, synthesis, and characterization of a series of mesogen‐jacketed liquid crystalline polymers (MJLCPs) based on the octyl substituted biphenyl mesogenic core through different linkage groups. The molecular characterizations of the polymers obtained by conventional free radical polymerization were performed with ¹H NMR, gel permeation chromatography, and thermogravimetric analysis. Their thermotropic liquid crystalline (LC) behaviors were investigated in detail by a combination of various techniques, such as polarized light microscopy, differential scanning calorimetry, and 1D and 2D wide‐angle X‐ray diffraction. Our results showed that all the polymers were thermally stable, and their LC phases were greatly dependent on the linking groups between the biphenyl mesogenic core and terminal alkyl group substituent. Polymers with ether/ester or ether linkage group exhibited an unusual phase behavior with temperature increasing, tetragonal columnar nematic LC phase, or columnar nematic phase developed at high temperatures for the polymers transformed into amorphous phase during cooling process, showing a re‐entrant phase behaviors. However, polymers with ester linkage group were not LC with temperature varied. It is illustrated that subtle changes in the molecular structure brought about tremendous variation of the LC phase properties for MJLCPs. © 2013 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2013, 51, 2545–2554     

Exploring possible reaction pathways for the o‐atom transfer reactions to unsaturated substrates catalyzed by a [Ni‐NO2] ↔ [Ni‐NO] redox couple using DFT methods

The (nitro)(N‐methyldithiocarbamato)(trimethylphospane)nickel(II), [Ni(NO₂)(S₂CNHMe)(PMe₃)] complex catalyses efficiently the O‐atom transfer reactions to CO and acetylene. Energetically feasible sequence of elementary steps involved in the catalytic cycle of the air oxidation of CO and acetylene are proposed promoted by the Ni(NO₂)(S₂CNHMe)(PMe₃)] ↔ Ni(NO₂)(S₂CNHMe)(PMe₃) redox couple using DFT methods both in vacuum and dichloromethane solutions. The catalytic air oxidation of HC≡CH involves formation of a five‐member metallacycle intermediate, via a [3 + 2] cyclo‐addition reaction of HC≡CH to the Ni‐N = O moiety of the Ni(NO₂)(S₂CNHMe)(PMe₃)] complex, followed by a β H‐atom migration toward the C_α carbon atom of the coordinated acetylene and release of the oxidation product (ketene). The geometric and energetic reaction profile for the reversible [Ni( ‐NO₂)(S₂CNHMe)(PMe₃)] [Ni( ‐ONO)(S₂CNHMe)(PMe₃)] linkage isomerization has also been modeled by DFT calculations. © 2017 Wiley Periodicals, Inc.     

MPS‐Modified Silica Nanoparticles Linked with Cd2+ Ions

Silica nanoparticles were linked by using 3‐mercaptopropyltrimethoxysilane (MPS) as a coupling agent and Cd²⁺ as bridging ions. The TEM micrographs showed approximately linear linkage between the silica nanoparticles rather than dense packing. The UV‐visible absorption spectra confirmed the formation of S‐Cd‐S bonds between the silica nanoparticles. The alternative films of MPS‐modified SiO₂ nanoparticles and Cd²⁺ ions were also prepared using the layer‐by‐layer self‐assembly technique and characterized by AFM.