Bacterial response to eukaryotic cells. Analysis of differentially expressed proteins using nano liquid chromatography-electrospray ionization tandem mass spectrometry

Host-bacteria interactions have mostly been investigated with regard to the host response or to activities of pathogenic bacteria. In contrast, we aim to identify reactions of non-pathogenic bacteria that result from their contact with host cells of the gastrointestinal tract. In a proteomic approach, the response of non-pathogenic human Escherichia coli bacteria on gut epithelial cells (rat IEC-6) was investigated in an in vitro co-culture model. For this purpose, a sensitive analytical procedure was developed based on the identification of two-dimensional polyacrylamide gel electrophoresis separated proteins by online nanoLC-electrospray ionization MS/MS using a quadrupole time-of-flight tandem mass spectrometer for accurate mass determination. We demonstrate here the efficiency of this technique by the identification of a total of 43 differentially expressed proteins, out of which 25 were up-regulated and 18 were down-regulated. They represent a wide range of molecular weight and different metabolic and physiological functions.     

Preparation of a sulfonated fused-silica capillary and its application in capillary electrophoresis and electrochromatography

In the present paper, two new methods, sol-gel and chemical bonding methods, were proposed for preparation of sulfonated fused-silica capillaries. In the sol-gel method, a fused-silica capillary was coated with the sol solution obtained by hydrolysis of 3-mercaptopropyltrimethoxysilane (MPTS) and tetramethoxysilane, and followed by age; while in the chemical bonding method, a capillary was chemically bonded directly with MPTS. Then, both the resulting capillaries were oxidized with an aqueous solution of hydrogen peroxide solution (H2O2) (30%, m/m) to obtain the sulfonated capillaries. The electroosmotic flow (EOF) for the sulfonated capillaries was found to remain almost constant within the studied pH range, and greater than that of the uncoated capillary. However, the coating efficiency of the capillary prepared by chemical bonding method was higher than that by sol-gel method, by comparing their magnitude of the EOF, the degree of disguise of the silanol and reproducibility of preparation procedure. The effects of the electrolyte's concentration and the content of methanol (MeOH) on the EOF were also studied. Especially, the study of the apparent pH (pH*) on the EOF in a water-MeOH system was reported. Finally, capillary electrophoretic separation of seven organic acids was achieved within 6.5 min under optimal condition using the chemically bonded sulfonated capillary. Moreover, separation of four alkaloids on the sulfonated capillary was compared with that on uncoated capillary in different conditions. Ion-exchange mechanism was found to play a key role for separation of these four basic analytes on the sulfonated capillary.     

Astragalus membranaceus ultrafine powder alleviates hyperuricemia by regulating the gut microbiome and reversing bile acid and adrenal hormone biosynthesis dysregulation

Ethnopharmacological relevanceMetabolic syndrome is closely related to the intestinal microbiota and disturbances in the host metabolome. Hyperuricemia (HUA), a manifestation of metabolic syndrome, can induce various cardiovascular diseases and gout, seriously affecting a patient’s quality of life. Astragalus membranaceus has a long history as a commonly used traditional Chinese medicine to treat kidney disease in China and East Asia.Materials and methodsWe compared the therapeutic effect of benzbromarone and two different doses Astragalus membranaceus ultrafine powder (AMUP) in rats with HUA. Ultra-performance liquid chromatography-mass spectrometer was used to analyze the AMUP metabolism in the plasma, urine, and feces. Further, 16S ribosome RNA sequencing and feces metabolomic were performed to capture the variation of the gut microbiota and metabolites changes before and after drug administration.ResultsAMUP had a notable impact on reducing blood uric acid levels while protecting the liver and kidney. Drug metabolism analysis demonstrated that effective constituent flavonoids are distributed in the blood, whereas saponins remain in the intestine. Gut microbiota analysis showed that low-dose AMUP ameliorated HUA-induced gut dysbiosis by reducing the abundance of harmful bacteria and increasing that of some beneficial bacteria with anti-inflammatory properties, such as Clostridia, Lachnospiraceae, and Muribaculaceae. In addition, HUA-induced changes in metabolite contents in bile acid and adrenal hormone biosynthesis pathways were restored after treatment with AMUP.ConclusionLow-dose AMUP exerts remarkable therapeutic effects on HUA by regulating the gut microbiome and mediating gut metabolism pathways associated with uric acid excretion.     

Syntheses and crystal structures of [Mg(HF)2](SbF6)2 and [Ca(HF)2](SbF6)2: new examples of HF acting as a ligand to metal centres

[Mg(HF)₂](SbF₆)₂ and [Ca(HF)₂](SbF₆)₂ monocrystals were grown from the corresponding hexafluoroantimonates(V) dissolved in anhydrous hydrogen fluoride. [Mg(HF)₂](SbF₆)₂ crystallizes in the space group Pnma (no. 62) with a=1249.1(4) pm, b=1230.2(4) pm, c=699.1(2) pm, V=1.0742(6) nm³, Z=4. Magnesium is octahedrally coordinated by six fluorine atoms from which two belong to two HF molecules. The structure can be represented by alternating rows of magnesium and antimony atoms running parallel to the c-axis. Magnesium atoms are connected by cis bridging Sb(2)F₆ units along the a-axis and by trans bridging Sb(1)F₆ units along the b-axis. In this way a three-dimensional network is formed.[Ca(HF)₂](SbF₆)₂ crystallizes in the space group P2₁/n (no. 14) with a=935.2(3) pm, b=1088.7(3) pm, c=1104.8(3) pm, β=106.697(5)°, V=1.0774(5) nm³, Z=4. The coordination sphere around the calcium atom consists of eight fluorine atoms which define the vertices of an Archimedean antiprism. The two HF molecules directly coordinate the calcium atom and their fluorine atoms are placed in the corners of different square faces of the Archimedean antiprism. The Ca-F(HF) distances are shorter than the Ca-F(Sb) distances. The Sb(1)F₆ and Sb(2)F₆ groups have four equatorial bridging fluorine atoms, while the Sb(3)F₆ groups have only two bridging trans F ligands. The Ca atoms in the [−1,0,1] plane are connected by equatorial F ligands of Sb(1)F₆ and Sb(2)F₆ units, forming a [Ca(SbF₆)⁺]_n layer. These layers are connected by trans bridging Sb(3)F₆ groups. HF molecules occupy the space between these layers and additionally contribute to the connection between the layers by hydrogen bonding.     

Dimethyl carbonate as a novel methylating reagent for fatty acids in analytical pyrolysis

Dimethyl carbonate (DMC) was investigated as a mild, harmless and odorless reagent for pyrolytic methylation of fatty acids. Soybean oil was selected as test material for its high content of (poly)unsaturated fatty acids. Pyrolyses were performed at 500, 700 and 900 degrees C by means of a heated platinum filament pyrolyser on-line and off-line to the GC-MS apparatus. Methyl esters of palmitic, linoleic, oleic and stearic acid were formed as prominent products from off-line pyrolysis of soybean oil in the presence of DMC and zeolite 13X. Fatty acid methyl esters (FAMEs) were not observed at important levels in the absence of zeolite, while on-line Py-GC-MS experiments resulted principally in the formation of free fatty acids and hydrocarbons. The FAME profiles obtained from the DMC/zeolite off-line pyrolysis were compared to those resulting from tetramethylammonium hydroxide (TMAH) thermochemolysis and BF3-methanol procedure. The observed differences between pyrolysis and methanolysis methods were principally attributed to the thermal degradation of unsaturated fatty acids. The effectiveness of the DMC/zeolite pyrolytic methylation was further demonstrated by the analysis of tripalmitine and soybean seeds.     

Spectral and thermal characterization of polyaniline–oxalic acid salt

Polyaniline–oxalic acid salts were prepared at 5 and 30°C by chemical polymerization of aniline using different concentration of oxalic acid. Polyaniline base was obtained from the corresponding polyaniline salt by dedoping using aqueous ammonium hydroxide solution. Conductivity measurements, elemental analysis, Infrared, electronic absorption, electron paramagnetic resonance spectral, and thermogravimetric analysis were performed on the polyaniline salts and bases. Composition and the extent of dopant in polyaniline salt systems where determined. The value of composition of polyaniline: oxalic acid is 4: 1.6 and the polymer yield is around 66%. The value of conductivity, polymer yield and composition of polyaniline–oxalic acid salt is independent of concentration of oxalic acid used and also the synthesis temperature. The results are compared with polyaniline–hydrochloride salt prepared by chemical polymerization. The conductivity of polyaniline–oxalic acid salt is three orders of magnitude lower than that of polyaniline-hydrocholoride salt. © 1995 John Wiley & Sons, Inc.     

Investigation of surface structure and composition of in situ annealed Fe–Mn binary alloy samples using RHEED and electron spectroscopy

The formation of oxides at the surface of Fe–1.5%Mn and Fe–0.6%Mn binary alloys was investigated as a function of the conditions of the heat treatments. Both the influence of temperature and the atmosphere under which the experiments were performed were studied. The range of annealing temperatures was adjusted to 800°C. The atmosphere consisted of a mixture of N₂–5%H₂ and traces of water vapour, with different fixed dew points ranging from −10°C to −30°C. The state of the annealed surfaces was determined using in situ analytical devices attached to the annealing reactor in order to avoid surface contamination or the formation of native oxides after the experiments due to contact with air. The structure and composition of the surfaces were determined by reflection high-energy electron diffraction (RHEED) and electron spectroscopy (XPS, AES). Copyright © 2002 John Wiley & Sons, Ltd.     

Speciation of arsenic(III) and arsenic(V) by inductively coupled plasma-atomic emission spectrometry coupled with preconcentration system

A novel and simple flow-based method was developed for the simultaneous determination of As(III) and As(V) in freshwater samples. Two miniature columns with a solid phase anion exchange resin, placed on two 6-way valves were utilized for the solid-phase collection/concentration of arsenic(III) and arsenic(V), respectively. As(III) could be retained on the column after its oxidation to As(V) species with an oxidizing agent. The collected analytes were then sequentially eluted by 2 M nitric acid and introduced into ICP-AES. Potassium permanganate was examined as potential oxidizing agent for conversion of As(III) to As(V). The standard deviation of the analytical signals (peak height) for the replicate analysis (n = 5) of 0.5 μg l⁻¹ solution were 3 and 5% for As(III) and As(V), respectively. The limit of detection (3σ) for both As(III) and As(V) were 0.1 μg l⁻¹. The proposed system produced satisfactory results on the application to the direct analysis of inorganic arsenic species in freshwater samples.