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91.
Analysis of an aggregation‐based algebraic two‐grid method for a rotated anisotropic diffusion problem
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A two‐grid convergence analysis based on the paper [Algebraic analysis of aggregation‐based multigrid, by A. Napov and Y. Notay, Numer. Lin. Alg. Appl. 18 (2011), pp. 539–564] is derived for various aggregation schemes applied to a finite element discretization of a rotated anisotropic diffusion equation. As expected, it is shown that the best aggregation scheme is one in which aggregates are aligned with the anisotropy. In practice, however, this is not what automatic aggregation procedures do. We suggest approaches for determining appropriate aggregates based on eigenvectors associated with small eigenvalues of a block splitting matrix or based on minimizing a quantity related to the spectral radius of the iteration matrix. Copyright © 2015 John Wiley & Sons, Ltd. 相似文献
92.
93.
Yelder A. Castillo Luis F. Zapata Jorge Trilleras Justo Cobo Christopher Glidewell 《Acta Crystallographica. Section C, Structural Chemistry》2014,70(1):50-54
The title compound, C23H17N3O4S, crystallizes with Z′ = 3 in the space group P. Two of the three independent molecules are broadly similar in terms of both their molecular conformations and their participation in hydrogen bonds, but the third molecule differs from the other two in both of these respects. The molecules are linked by a combination of N—H...O, N—H...N, C—H...O, C—H...N and C—H...π(arene) hydrogen bonds to form a continuous three‐dimensional framework structure within which a centrosymmetric six‐molecule aggregate can be identified as a key structural element. 相似文献
94.
Saroj K. Rout David Rhyner Roland Riek Jason Greenwald 《Chemistry (Weinheim an der Bergstrasse, Germany)》2022,28(3):e202103841
The prebiotic emergence of molecules capable both of self-replication and of storing information was a defining event at the dawn of life. Still, no plausible prebiotic self-replication of biologically relevant molecules has been demonstrated. Building upon the known templating nature of amyloids, we present two systems in which the products of a peptide-bond-forming reaction act as self-replicators to enhance the yield and stereoselectivity of their formation. This first report of an amino acid condensation that can undergo autocatalysis further supports the potential role of amyloids in prebiotic molecular evolution as an environment-responsive and information-coding system capable of self-replication. 相似文献
95.
Victor P. Arkhipov Ruslan V. Arkhipov Andrei Filippov 《Magnetic resonance in chemistry : MRC》2022,60(3):359-368
We examined a series of amino acid-based surfactants with two carboxylic groups separated by a spacer of one, two, or three carbon atoms with sodium and calcium counterions in the premicellar concentration region near the CMC. 1H nuclear magnetic resonance (NMR) spectroscopy and NMR diffusometry techniques were used to study the local environment, association, and translational dynamics of the surfactant's molecules. We measured the self-diffusion coefficients of the micelles, calculated the effective hydrodynamic radii, and determined the temperature region in which the premicelles exist. With an increase in temperature from 295 to 335 K, the premicellar state of the surfactant is replaced by the monomeric state. 相似文献
96.
Ander Camiruaga Dr. Imanol Usabiaga Dr. Camilla Calabrese Iker Lamas Prof. Francisco J. Basterretxea Dr. José A. Fernández 《Chemistry (Weinheim an der Bergstrasse, Germany)》2022,28(1):e202103636
One of the most fascinating questions in chemistry is why nature chose CGAT as the alphabet of life. Very likely, such selection was the result of multiple factors and a long period of refinement. Here, we explore how the intermolecular interactions influenced such process, by characterizing the formation of dimers between adenine, theobromine and 4-aminopyrimidine. Using a combination of mass-resolved excitation spectroscopy and DFT calculations, we determined the structure of adenine-theobromine and 4-aminopyrimidine-theobromine dimers. The binding energy of these dimers is very close to the canonical adenine-thymine nucleobases. Likewise, the dimers are able to adopt Watson-Crick conformations. These findings seem to indicate that there were many options available to build the first versions of the informational polymers, which also had to compete with other molecules, such as 4-aminopyrimidine, which does not have a valid attaching point for a saccharide. For some reason, nature did not select the most strongly-bonded partners or if it did, such proto-bases were later replaced by the nowadays canonical CGAT. 相似文献
97.
药物种类按照分子量来划分可以分为小分子药物(自然提取或化学合成的)和大分子药物(生物制剂). 尽管目前小分子药物仍然是市场的主流, 但其研发增速趋缓, 而大分子药物在药物研发中的地位日渐突显, 并被预期在未来药物市场中占据越来越高的份额. 除了生物制剂大分子药物, 将小分子药物与天然或合成大分子结合制备得到的化学合成大分子药物, 近年来受到药物研究者们越来越多的关注. 由于大分子具有丰富的骨架结构及空间构架, 其所特有的骨架效应、多价效应, 以及通过分子组装而产生的聚集效应和靶向效应等, 能够为药物化学的设计带来更多新的可能. 有鉴于此, 本综述将简略介绍药物化学设计中的大分子效应, 重点讨论合成大分子的骨架效应、多价效应、聚集效应和靶向效应等为药物化学设计所带来的新性能. 通过对药物化学中大分子效应所带来的优势、问题和重要研究进展的探讨, 以期能够推动化学合成大分子药物的发展, 为药物化学设计提供新的思路. 相似文献
98.
介绍了“乙炔的化学性质”的教学设计思路,展现了如何利用创新实验、丰富素材和问题讨论,帮助学生理解有机物性质和结构之间的关系。主要涉及以下几个环节:(1)通过课前自主预习,从乙炔与乙烯的相似性入手,预测乙炔的性质,了解乙炔的实验室制法;(2)结合2个创新分组实验“基于井穴板的微型化气体连续制备和性质检验装置”“利用真空输液瓶、微型样品瓶和注射器的密闭气体微型反应装置”,教师和学生一起巩固了乙炔的实验室制法,验证了预测的化学性质,丰富了对乙炔性质的感性认知,发现了“乙炔不能使酸性K2Cr2O7溶液褪色”的异常现象;(3)从尝试解释异常现象入手,教师和学生一起从键能、加成比例、聚合后主链结构等多个角度探讨了乙炔与乙烯性质和结构的差异,建立起有机物官能团与性质关系的认知模型;(4)通过尝试利用模型解释2000年诺贝尔化学奖“导电高分子”和2017年度国家自然科学成果一等奖“AIE聚集诱导发光材料” 的结构、性质与应用,教师和学生一起提升了对认知模型的理解建构,感悟了科学研究的乐趣,体会化学科学在促进人类文明发展和社会进步中的重要作用。 相似文献
99.
Sangeeta Chandrashekar Raman Vijayakumar Ramachandran Chelliah Eric Banan-Mwine Daliri Inamul Hasan Madar Ghazala Sultan Momna Rubab Fazle Elahi Su-Jung Yeon Deog-Hwan Oh 《Molecules (Basel, Switzerland)》2021,26(7)
The study aimed to investigate the antibacterial activity of Mustard (Brassica juncea) and Moringa (Moringa oleifera) leaf extracts and coagulant protein for their potential application in water treatment. Bacterial cell aggregation and growth kinetics studies were employed for thirteen bacterial strains with different concentrations of leaf extracts and coagulant protein. Moringa oleifera leaf extract (MOS) and coagulant protein showed cell aggregation against ten bacterial strains, whereas leaf extract alone showed growth inhibition of five bacterial strains for up to 6 h and five bacterial strains for up to 3 h. Brassica juncea leaf extract (BJS) showed growth inhibition for up to 6 h, and three bacterial strains showed inhibition for up to 3 h. The highest inhibition concentration with 2.5 mg/mL was 19 mm, and furthermore, the minimum inhibitory concentration (MIC) (0.5 mg/mL) and MBC (1.5 mg/mL) were determined to have a higher antibacterial effect for <3 KDa peptides. Based on LCMS analysis, napin was identified in both MOS and BJS; furthermore, the mode of action of napin peptide was determined on lipoprotein X complex (LpxC) and four-chained structured binding protein of bacterial type II topoisomerase (4PLB). The docking analysis has exhibited moderate to potent inhibition with a range of dock score −912.9 Kcal/mol. Thus, it possesses antibacterial-coagulant potential bioactive peptides present in the Moringa oleifera purified protein (MOP) and Brassica juncea purified protein (BJP) that could act as an effective antimicrobial agent to replace currently available antibiotics. The result implies that MOP and Brassica juncea purified coagulant (BJP) proteins may perform a wide degree of antibacterial functions against different pathogens. 相似文献
100.
Valeria Guarrasi Giacoma Cinzia Rappa Maria Assunta Costa Fabio Librizzi Marco Raimondo Vita Di Stefano Maria Antonietta German Silvia Vilasi 《Molecules (Basel, Switzerland)》2021,26(8)
Waste valorization represents one of the main social challenges when promoting a circular economy and environmental sustainability. Here, we evaluated the effect of the polyphenols extracted from apple peels, normally disposed of as waste, on the amyloid aggregation process of κ-casein from bovine milk, a well-used amyloidogenic model system. The effect of the apple peel extract on protein aggregation was examined using a thioflavin T fluorescence assay, Congo red binding assay, circular dichroism, light scattering, and atomic force microscopy. We found that the phenolic extract from the peel of apples of the cultivar “Fuji”, cultivated in Sicily (Caltavuturo, Italy), inhibited κ-casein fibril formation in a dose-dependent way. In particular, we found that the extract significantly reduced the protein aggregation rate and inhibited the secondary structure reorganization that accompanies κ-casein amyloid formation. Protein-aggregated species resulting from the incubation of κ-casein in the presence of polyphenols under amyloid aggregation conditions were reduced in number and different in morphology. 相似文献