Determination of binding constants and stoichiometries for platinum anticancer drugs and serum transport proteins by capillary electrophoresis using the Hummel-Dreyer method

A CE method has been developed to evidence and quantitatively characterize the interaction between platinum-based antitumor drugs and human serum proteins. This method is a variant of affinity CE modified regarding both experimental setup and data treatment so as to measure the peaks (or vacancies) that correspond to the bound drug when it slowly binds to the protein. Using the formalism of the Hummel-Dreyer method and cisplatin and oxaliplatin as test compounds, a protocol for determining albumin and transferrin binding constants and stoichiometries, including (and distinguished by) 48 hours of incubation of the reaction mixture, was elaborated. Relative affinities of drugs toward different proteins in aqueous solution at physiological pH, chloride concentration, and temperature were compared in terms of overall binding constants and numbers of drug molecules attached to the protein. The results indicate that both platinum drugs bind to albumin more strongly than to transferrin, supporting the concept that the albumin fraction is a major drug supply route for chemotherapeutical needs. From a comparison with the binding parameters measured previously for cisplatin by other methods, conclusions were drawn about the validity of CE as a simple and convenient method for assaying protein-drug reactions with slow kinetics.     

Probing in vitro digestion at oil–water interfaces

Interfacial layers have been widely applied to study the formation and stability of emulsion-based systems. However, the application of isolated interfaces to address digestibility of emulsions is often limited because of the complexity of experimental methods and results. This review summarizes the latest developments in analytical methods and literature data on effects of digestion on interfacial layers. Particular emphasis is given to understand the changes on interfacial magnitudes during oral, gastric, and duodenal digestion, either applied separately or sequentially. Limitations of interfacial aspects and key factors that influence emulsion microstructure in bulk and lipid digestion are identified. Understanding the behavior of interfacial layers upon gastrointestinal digestion promotes an accurate tracking of the physiological fate of emulsions.     

Solvent extraction of sodium picrate with 15-crown-5 into carbon tetrachloride. The determination of the dimer-formation constant of a crown ether-univalent metal salt 1∶1∶1 complex

The theory is derived to determine the dimer-formation constant,K ₂, of a crown ethermetal salt 111 complex in organic solvents of low dielectric constant by solvent extraction. The theoretical predictions are verified experimentally by extraction of sodium picrate (NaA) with 15-crown-5 (15C5) into carbon tetrachloride. All the experiments were conducted at 25°C. The logK ₂ value of the Na(15C5)A complex in carbon tetrachloride has been determined to be 4.05±0.11. Moreover, the partition constant of the complex is calculated.     

Process improvement in acetone-butanol production from hardwood by simultaneous saccharification and extractive fermentation

The acetone-butanol production by simultaneous saccharification and extractive fermentation (SSEF) was investigated. In the SSEF employing cellulase enzymes andClostridium acetobutylicum, both glucan and xylan fractions of pretreated aspen are concurrently converted into acetone and butanol. Continuous removal of the fermentation products from the bioreactor by extraction was an important factor that allowed long-term fed-batch operation. The use of membrane extraction prevented the problems of phase separation and extractant loss. Increase in substrate feeding as well as reduction of nutrient supply was found to be beneficial in suppressing the acid production, thereby improving the solvent yield. Because of prolonged low growth conditions prevalent in the fed-batch operation, the butanol-to-acetone ratio in the product was significantly higher at 2.6–2.8 compared to the typical value of two.     

Scoring functions: A view from the bench

Computational approaches to drug design are presently hindered by the complexity of the physical chemistry which underlies weak, non- covalent interactions between protein targets and small molecule ligands. Although a number of programs are now available for the design of novel potential ligands, it remains a key problem to rank these rapidly and reliably by estimated binding affinity. Such a step is necessary to select only the most promising candidates for synthesis and experimental characterisation. To calculate ligand affinity quickly and reliably is an extremely difficult problem, but it may well prove possible to estimate sufficiently accurately given an appropriate set of parameters to score individual protein–ligand interactions. Improvements in the situation will require a wider set of thermodynamically characterised systems than is currently available.     

人参中总皂甙的超声波快速提取方法研究

建立了人参中总皂甙超声波半微量快速提取方法，与索氏提取法相比，此法提取时间由索氏法的1－2个工作日缩短到30min，节省大量试剂，综合提取效率提高数十倍，与索氏提取法对照分析表明，此法可完全满足人参中总皂甙的快速测定要求。     

Exploring bioanalytical applications of assisted protein reassembly

Reassembly of protein from its peptide fragments is a technique that can have many applications in the bioanalytical field. Typically, a reporter protein fragmented into its two peptides is employed as a label in this study. This fragments of peptide can reassemble yielding an active functional reporter. This reassembly of the protein can be assisted by non-covalently interacting peptides or proteins, which are attached to the fragmented reporter. This technique has been employed in several applications including study of protein–protein interactions, antibody screening, immunoassays, and high-throughput screening. This review focuses on different reporters employed in the study of reassembly of proteins and applications of this strategy in bioanalysis.     

Sequential extraction of phosphorus in soil and sediment using a continuous-flow system

Distribution and mobility of phosphorus in soil and sediment are usually studied by sequential extraction. In the extraction procedure, a sample is treated with a series of reagents to distinguish the phases to which phosphorus is associated such as carbonate and iron or manganese oxides, etc. There have been a number of extraction schemes presented for phosphorus. At present, all of the existing schemes are carried out batchwise. Phosphorus contents derived from all sequences are operationally defined and depend on experimental conditions.An extraction procedure, which is a continuous-flow-based technique, was recently proposed by our group for metals in soils and sediments. The extraction is carried out in a closed chamber through which extractants are passed sequentially. In this paper, the system was investigated using the extraction scheme of Hieltjes and Lijklema to study distribution of phosphorus in three certified reference materials (CRMs). A number of fractions were collected for each reagent for subsequent colorimetric determination. The results are compared with those obtained from a batch extraction. The summation of phosphorus contents of all phases were compared with the certified values and with the values obtained from total digestion. These results have demonstrated that the continuous extraction system developed is also applicable for fractionation of phosphorus. Advantage and disadvantage are discussed.     

Liquid-liquid extraction of copper (I) and copper (II) as ion-paired complexes with acyclic 2-thienyl-containing polythioether and triphenylmethane dye anion

Three acyclic polythioethers containing 2-thienyl units at both ends were synthesized and the effect of substituent on the extraction of copper(II) was studied. The methyl groups in the terminal thiophene ring have imparted an appreciable degree of increase in the percent extraction of copper(II), while the introduction of chlorine atoms into the 2-thienyl unit resulted in the reverse effect. Among the counter dye anions examined, tetrabromophenolphthalein ethylester was the best one for copper(II) extraction. The composition of extracted species was evaluated to be 122 (Cu(II)/polythioether/dye anion). Quantitative extraction of copper(I) was attained as complexes with various triphenylmethane dyes, i.e., bromocresol green, bromothymol blue, bromo-phenol blue and pyrogallol red. Copper(I) in organic phase was completely back-extracted with 2 mole/l sulfuric acid containing 10% hydrogen peroxide.     

Chemical analysis of microcystins RR and LR in cyanobacterium using a prepacked cyano cartridge

Summary A new method for the determination of microcystins PR and LR in cyanobacterium was developed using cyano-type prepacked cartridges. The microcystins were extracted with 10% acetic acid and the extract applied to a Baker 10 cyano cartridge. After elution from the cartridge with 0.5M acetic acid-acetonitrile (19) the microcystins were determined by HPLC. Better recoveries and chromatograms were observed than with ODS cartridges.