Simple test system for single molecule recognition force microscopy

We have established an easy-to-use test system for detecting receptor-ligand interactions on the single molecule level using atomic force microscopy (AFM). For this, avidin-biotin, probably the best characterized receptor-ligand pair, was chosen. AFM sensors were prepared containing tethered biotin molecules at sufficiently low surface concentrations appropriate for single molecule studies. A biotin tether, consisting of a 6 nm poly(ethylene glycol) (PEG) chain and a functional succinimide group at the other end, was newly synthesized and covalently coupled to amine-functionalized AFM tips. In particular, PEG₈₀₀ diamine was glutarylated, the mono-adduct NH₂-PEG-COOH was isolated by ion exchange chromatography and reacted with biotin succinimidylester to give biotin-PEG-COOH which was then activated as N-hydroxysuccinimide (NHS) ester to give the biotin-PEG-NHS conjugate which was coupled to the aminofunctionalized AFM tip. The motional freedom provided by PEG allows for free rotation of the biotin molecule on the AFM sensor and for specific binding to avidin which had been adsorbed to mica surfaces via electrostatic interactions. Specific avidin-biotin recognition events were discriminated from nonspecific tip-mica adhesion by their typical unbinding force (∼40 pN at 1.4 nN/s loading rate), unbinding length (<13 nm), the characteristic nonlinear force-distance relation of the PEG linker, and by specific block with excess of free d-biotin. The convenience of the test system allowed to evaluate, and compare, different methods and conditions of tip aminofunctionalization with respect to specific binding and nonspecific adhesion. It is concluded that this system is well suited as calibration or start-up kit for single molecule recognition force microscopy.     

CAST/CNMR: highly accurate C NMR chemical shift prediction system considering stereochemistry

Accurate, practical prediction of ¹³C NMR chemical shifts has been achieved with a new system, CAST/CNMR, taking account of stereochemistry. The CAST/CNMR system has solved the critical problem of the accurate distinction of differences and similarities in stereochemical structures around a specific carbon, which has not yet been achieved by any other database-oriented system for prediction of ¹³C NMR chemical shifts. CAST/CNMR uses a three-dimensional structural database together with a ¹³C NMR spectral database. Absolute/relative configurational and conformational structural information are described by the CAST (CAnonical-representation of STereochemistry) coding method. This paper provides an overview of the CAST/CNMR system, and describes its application to two natural products as examples.     

Supercritical Propanol-Water Synthesis and Comprehensive Size Characterisation of Highly Crystalline anatase TiO2 Nanoparticles

Highly crystalline anatase TiO₂ nanoparticles have been synthesised in less than 1 min in a supercritical propanol-water mixture using a continuous flow reactor. The synthesis parameter space (T, P, concentration) has been explored and the average particle size can be accurately controlled within 10-18 nm with narrow size distributions (2-3 nm). At subcritical conditions amorphous products are obtained, whereas a broad range of T and P in the supercritical regime gives 11-14 nm particles. At high temperature and pressure, the particles size increase to 18 nm. The nanoparticles have been extensively characterised with powder X-ray diffraction (PXRD), transmission electron microscopy (TEM) and small-angle X-ray scattering (SAXS) with excellent agreement on size and size distribution parameters. The SAXS analysis suggests disk-shaped particles with diameters that are approximately double the height. For comparison, a series of conventional autoclave sol-gel syntheses have been carried out. These also produce phase-pure anatase nanoparticles, but with much broader size distributions and at much longer synthesis times (hours). The study demonstrates that synthesis in supercritical fluids is a very promising method for manipulating the size and size distribution of nanoparticles, thus removing one of the key limitations in many applications of nanomaterials.     

Application of HPLC to measure vanadium in environmental,biological and clinical matrices

Vanadate and vanadium compounds exist in many environmental, biological and clinical matrices, and despite the need only limited progress has been made on the analysis of vanadium compounds. The vanadium coordination chemistry of different oxidation states is known, and the result of the characterization and speciation analysis depends on the subsequent chemistry and the methods of analysis. Many studies have used a range of methods for the characterization and determination of metal ions in a variety of materials. One successful technique is high performance liquid chromatography (HPLC) that has been used mainly for measuring total vanadium level and metal speciation. Some cases have been reported where complexes of different oxidation states of vanadium have been separated by HPLC. Specifically reversed phase (RP) HPLC has frequently been used for the measurement of vanadium. Other HPLC methods such as normal phase, anion-exchange, cation-exchange, size exclusion and other RP-HPLC modes such as, ion-pair and micellar have been used to separate selected vanadium compounds. We will present a review that summarizes and critically analyzes the reported methods for analysis of vanadium salts and vanadium compounds in different sample matrices. We will compare various HPLC methods and modes including sample preparation, chelating reagents, mobile phase and detection methods. The comparison will allow us to identify the best analytical HPLC method and mode for measuring vanadium levels and what information such methods provide with regard to speciation and quantitation of the vanadium compounds.     

Influence of volatile hydride-forming elements on antimony determination by atomic-absorption spectrometry with hydride-generation

A study was undertaken to determine the interfering effects of arsenic, bismuth, germanium, lead, selenium, tin and tellurium on trace determination of antimony by atomic-absorption spectrometry with hydride-generation. A 1% NaBH(4) solution was used as reductant and a small amount of oxygen was added to the hydrogen produced, to support the combustion and atomization of SbH(3). The interference from selenium in the determination of antimony is removed if potassium iodide-ascorbic acid solution or copper sulphate is added to the sample solution. The interference of tin and tellurium can also be avoided by adding potassium iodide-ascorbic acid solution. A possible interference mechanism is discussed.     

Simultaneous determination of C1−C8 n-alkyl acetates and corresponding mono-, di- and trichloroacetates on glass capillary columns with programmed temperature rise

Summary Gas chromatography of mixtures of aliphaticn-alkyl acetates (CH₃–COOR), chloroacetates (CHCl₂–COOR), dichloroacetates (CHCl₂–COOR) and trichloroacetates (CCl₃–COOR), where the alcohol chain length (R) varied between 1 and 8, has been studied on SE-30, Carbowax 20M and OV-351 glass capillary columns with programmed temperatures from 50°C at 2, 4, 6, 8 and 10°C/min. Compounds in the homologous series are eluted in the direct order from methyl ton-octyl acetate. The isomeric chloro esters are eluted on SE-30 according to their boiling points in the order: mono-, di- and trichloro isomer, whereas on polar columns di- and trichloro esters are eluted in the reverse order. The complete separation of all 32 individual components from the mixture could not be reached by any single column, the best separation occurred on SE-30. The mixture can, however, be separated by using columns with polar and non-polar stationary phases. The relative retention times for the compounds are given and the retention order discussed.     

Tetraaryl-methane analogues in group 14—V. Distortion of tetrahedral geometryin terms of through-space π–π and π–σ interactions andNMR sagging in terms of π–σcharge transfer

44 members of thecompound series Ph_4−nMR_n (M=Si, Ge, Sn, Pb; R=o-, m-, p-Tol; n=0–4) were synthesized (15 newcompounds). The crystal structures of Ph₃Sn (o-Tol) and PhSn (o-Tol)₃ were determined and compared to 16 known structures. Subject to the distanced (M–C), an interplay between through-space π–π repulsion and π–σ attraction leads to either elongated or compressed tetrahedral geometry. ²⁹ Si-, ¹¹⁹ Sn- and ²⁰⁷ Pb-NMR chemical shifts were determined in solution and in the solid state. ⁷³ Ge chemical shifts were measured only in solution. Anupfield or downfield sagging of the chemical shifts along each series is rationalized in terms of a π–σcharge transfer which is constrained by torsion of the aromatic groups.     

A comparative study on the single-scan and multiple-scan techniques in differential scanning calorimetry: Application to the crystallization of the semiconducting Ge0.13Sb0.23Se0.64 alloy

A method has been developed for analysing the evolution with time of the volume fraction transformed and for calculating the kinetic parameters at non-isothermal reactions in materials involving formation and growth of nuclei. By considering the assumptions of extended volume and random nucleation, a general expression of the fraction transformed as a function of time has been obtained in isothermal crystallization processes. Considering the mutual interference of regions growing from separate nuclei the Johnson–Mehl–Avrami equation has been deduced as a particular case. The application of the transformation rate equation to the non-isothermal processes has been carried out under the restriction of a nucleation which takes place early in the transformation and the nucleation frequency is zero thereafter. Under these conditions, the kinetic parameters have been deduced by using the techniques of data analysis of single-scan and multiple-scan. The theoretical method developed has been applied to the glass-crystal transformation kinetics of the semiconducting Ge_0.13Sb_0.23Se_0.64 alloy. The kinetic parameters obtained according to both techniques differ by only about 2.5%, which confirms the reliability and accuracy of the single-scan technique when calculating the above-mentioned parameters in non-isothermal transformation processes. The phases at which the above-mentioned semiconducting glass crystallizes after the thermal process have been identified by X-ray diffraction. The diffractogram of the transformed material shows that microcrystallites of Sb₂Se₃ and GeSe are associated with the crystallization process, remaining a residual amorphous matrix.