Spectroscopic properties of the photoproducts of pyridoxal-5′-P irradiation: Catalytic site recognition of ribonuclease A

Photoproducts of pyridoxal-5-P, i.e., 4-pyridoxic-5-P and bis-pyridoxal-5-P, have been studied by spectroscopic methods. The spectroscopic properties of bis-pyridoxal-5-P (bis-PLP) resemble those of pyridoxal-5-P (PLP) under similar experimental conditions. The coupling of methylen hydrogens to the phosphorus atom has been shown by NMR spectroscopy. The singlet in the³¹P-NMR spectra and the triplet in¹H-undecoupled experiments confirm the presence of the phosphate group in the 5 position of the structure of the vitamin. The effect of pH and solvent composition on the relative distribution of species of bis-pyridoxine-5-P (bis-PNP) has been investigated by absorption and fluorescence spectroscopy. The acid-base dissociation of the phosphate group is easily detected by emission spectroscopy. Bis-PNP and bis-PLP bind to the enzyme RNase A and they behave as competitive inhibitors with respect to the substrate cytidine-2-3-cyclic phosphate. The natural forms of vitamin B₆, pyridoxine, and pyridoxine-5-P have no effect on the catalytic activity of the protein. Experimental evidence derived from fluorescence and inhibition experiments is consistent with the hypothesis that bis-PNP recognizes the catalytic site of RNase A.     

Determination of the partition coefficients of the nonionic detergent C12E7 between lipid-detergent mixed membranes and water by means of Laurdan fluorescence spectroscopy

The membrane-water partition coefficient of the detergent C₁₂E₇ between water and C₁₂E₇/POPC mixed membranes has been determined by means of steady-state fluorescence spectroscopy. The emission spectra of the fluorescent probe Laurdan were used as an indicator of membrane composition at different membrane concentrations in the sample. The partition coefficient expressed as the ratio of the mole fractions of the detergent in the membrane and water phases is about 6^*10⁵ at low molar ratios of C₁₂E₇/POPC (R _c ) and decreases rapidly with increasingR _c . The limiting detergent content of the lamellar phase (R _c ^* >0.8) is indicated by a minimum ofP(R _c ).     

Surface tension in Ising systems with Kac potentials

We consider an Ising spin system with Kac potentials in a torus of ^d,d>-2, and fix the temperature below its Lebowitz-Penrose critical value. We prove that when the Kac scaling parameter vanishes, the log of the probability of an interface becomes proportional to its area and the surface tension, related to the proportionality constant, converges to the van der Waals surface tension. The results are based on the analysis of the rate functionals for Gibbsian large deviations and on the proof that they -converge to the perimeter functional of geometric measure theory (which extends the notion of area). Our considerations include nonsmooth interfaces, proving that the Gibbsian probability of an interface depends only on its area and not on its regularity.     

The Newton modified barrier method for QP problems

The Modified Barrier Functions (MBF) have elements of both Classical Lagrangians (CL) and Classical Barrier Functions (CBF). The MBF methods find an unconstrained minimizer of some smooth barrier function in primal space and then update the Lagrange multipliers, while the barrier parameter either remains fixed or can be updated at each step. The numerical realization of the MBF method leads to the Newton MBF method, where the primal minimizer is found by using Newton's method. This minimizer is then used to update the Lagrange multipliers. In this paper, we examine the Newton MBF method for the Quadratic Programming (QP) problem. It will be shown that under standard second-order optimality conditions, there is a ball around the primal solution and a cut cone in the dual space such that for a set of Lagrange multipliers in this cut cone, the method converges quadratically to the primal minimizer from any point in the aforementioned ball, and continues, to do so after each Lagrange multiplier update. The Lagrange multipliers remain within the cut cone and converge linearly to their optimal values. Any point in this ball will be called a hot start. Starting at such a hot start, at mostO(In In ^-1) Newton steps are sufficient to perform the primal minimization which is necessary for the Lagrange multiplier update. Here, >0 is the desired accuracy. Because of the linear convergence of the Lagrange multipliers, this means that onlyO(In ^-1)O(In In ^-1) Newton steps are required to reach an -approximation to the solution from any hot start. In order to reach the hot start, one has to perform Newton steps, wherem characterizes the size of the problem andC>0 is the condition number of the QP problem. This condition number will be characterized explicitly in terms of key parameters of the QP problem, which in turn depend on the input data and the size of the problem.Partially supported by NASA Grant NAG3-1397 and National Science Foundation Grant DMS-9403218.     

Pathwise rate- stability for input-output processes

An input-output processZ = {Z(t), t 0} is said to be-rate stable ifZ(t) = o((t)) for some non-negative function(t). We prove that the processZ is -rate stable under weak conditions that include the assumption that input satisfies a linear burstiness condition and Z is asymptotically average stable. In many cases of interest, the conditions for-rate-stability can be verified from input data. For example, using input information, we establish-rate stability of the workload for multiserver queues, an ATM multiplexer, and-rate stability of queue-length processes for infinite server queues.     

Effect of ‘Transannular Transmission’ in Dibenzo-18-Crown-6

The effect of the nature of the substituent in the monosubstituted derivatives of dibenzo-18-crown-6 on the reactivity and direction of the electrophilic substitution reaction of the unsubstituted benzene ring has been determined. This transfer is carried out via the macrocycle and therefore is called transannular transmission. The possible mechanism of this transmission is discussed.     

Primal-dual interior point approach for computingl 1-solutions andl ∞-solutions of overdetermined linear systems

This paper concerns solving an overdetermined linear systemA ^T x=b in the leastl ₁-norm orl -norm sense, whereA ^m×n ,m<n. We show that the primal-dual interior point approach for linear programming can be applied, in an effective manner, to linear programming versions of thel ₁ andl -problems. The resulting algorithms are simple to implement and can attain quadratic or superlinear convergence rate. At each iteration, the algorithms must solve a linear system with anm×m positive-definite coefficient matrix of the formADA ^T , whereD is a positive diagonal matrix. The preliminary numerical results indicate that the proposed algorithms offer considerable promise.This research was supported in part by Grants NSF DMS-91-02761 and DOE DE-FG05-91-ER25100.     

Sensitivity analysis of the greatest eigenvalue of a symmetric matrix via the ɛ-subdifferential of the associated convex quadratic form

LetA(·) be ann × n symmetric affine matrix-valued function of a parameteruR ^m , and let (u) be the greatest eigenvalue ofA(u). Recently, there has been interest in calculating (u), the subdifferential of atu, which is useful for both the construction of efficient algorithms for the minimization of (u) and the sensitivity analysis of (u), namely, the perturbation theory of (u). In this paper, more generally, we investigate the Legendre-Fenchel conjugate function of (·) and the -subdifferential (u) of atu. Then, we discuss relations between the set (u) and some perturbation bounds for (u).The author is deeply indebted to Professor J. B. Hiriart-Urruty who suggested this study and provided helpful advice and constant encouragement. The author also thanks the referees and the editors for their substantial help in the improvement of this paper.     

O(N) vector model with twisted boundary conditions

Prompted by a recent article of Chakravarty, we reexamine theO(N) vector model with twisted boundary conditions ind dimensions in the various frameworks of the =d–2 expansion, the =4–d expansion, and the large-N expansion. These continuum models describe the physics below the critical temperatureT _c and nearT _c of a latticeO(N) spin model. We determine the effect of the twisting on finite-size scaling functions, for various geometries.On leave from G. Nadjakov Institute of Solid State Physics, 1784 Sofia, Bulgaria.     

A large deviation principle for (r,p)-capacities on the Wiener space

Summary We formulate and prove a large deviation principle for the (r, p)-capacity on an abstract Wiener space. As an application, we obtain a sharpening of Strassen's law of the iterated logarithm in terms of the capacity.