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71.
Summary A set of algorithms designed to enhance the display of protein binding cavities is presented. These algorithms, collectively entitled CAVITY SEARCH, allow the user to isolate and fully define the extent of a particular cavity. Solid modeling techniques are employed to produce a detailed cast of the active site region, which can then be color-coded to show electrostatic and steric interactions between the protein cavity and a bound ligand. 相似文献
72.
The structure of the double electric layer (DEL) on a liquid dropping Sn-Ga electrode containing 8 at. % of Sn is studied in acetonitrile (AN) solutions of electrolytes. It is shown that the transition from aqueous to AN solutions of electrolytes makes it possible to expand the region of investigation of parameters of DEL on an Sn-Ga electrode from negative charges to a zero charge and to small positive charges. As follows from the obtained data, throughout the entire interval of charges studied, an excess, as compared with an Hg electrode, chemisorption interaction (Sn-Ga)-AN is absent. It is established that the distance of the closest approach of AN dipoles to an ionic core increases upon going from Hg to Sn-Ga to Ga. The Ga, Bi-Ga, and Sn-Ga electrodes, which possess close values of the “electrochemical work function,” are used as an example to show that the metal-solvent chemisorption interaction increases with decreasing distance of the closest approach of its dipoles to the ionic core of the metal. The effect of this factor becomes stronger as the donor number of the solvent increases. 相似文献
73.
Tingmin Wang Jerald S. Bradshaw Janet C. Curtis Peter Huszthy Reed M. Izatt 《Journal of inclusion phenomena and macrocyclic chemistry》1993,16(2):113-122
Significant - interaction is found in the complexes of (S, S)-dimethylpyridino-18-crown-6 with (R)- and (S)-[-(1-naphthyl)ethyl]ammonium perchlorate. This finding is supported by the1H NOESY NMR spectral technique, greater chemical shift changes of aromatic protons in both host and guest molecules upon complexation, and by molecular mechanics calculations. Because of the flexibility of the ligand, the tripod hydrogen bonding causes13C relaxation times of all periphery carbons to decrease without significant selectivity. Rotational energy barrier calculations of the methyl groups of the complexed ligand also show that the (S, S)-host-(R)-guest is the more stable complex. 相似文献
74.
A study was carried out to determine if rotational correlation time of spin-labeled hen egg lysozyme (HEL) interacting with ultrafiltration membranes could be used to infer protein-membrane interaction. Polysulfone and cellulosic membranes, which have notably different adsorption properties, and membranes with varying pore sizes were used in this study. Based on this study, it was determined that the rotational correlation time does reflect variations in protein adsorption and pore plugging on membranes. The rotational correlation times for the highly adsorbent polysulfone (2.82 × 10−8 s) were significantly higher than those obtained from proteins on cellulosic membranes (0.62 × 10−8 s) and from those in solution (0.17 × 10−8 s). Rotational correlation time was also increased due to steric hindrance associated with pore plugging, although it was not as significant as the adsorption effect. This study indicates that the rotational time constant can be used to infer the type of protein-membrane interaction. 相似文献
75.
Excess Molar Volume and Viscosity of Isobutyric Acid + Water Binary Mixtures Near and Far Away from the Critical Temperature 总被引:1,自引:0,他引:1
The excess molar volume VE, shear viscosity deviation Δη and excess Gibbs energy of activation ΔG∗E of viscous flow have been investigated by using density (ρ) and shear viscosity (η) measurements for isobutyric acid + water (IBA+W) mixtures over the entire range of mole fractions at five different temperatures,
both near and close to the critical temperature (2.055K ≤ (T−Tc)≤ 13.055K). The results were also fitted with the Redlich–Kister equation. This system exhibited very large negative values
of VE and very large positive values of Δη due to increased hydrogen bonding interactions and correlation length between unlike molecules in the critical region and
to very large differences between the molar volumes of the pure components at low temperatures. The activation parameters
ΔH∗ and ΔS∗ have been also calculated and show that the critical region has an important effect on the volumetric properties. 相似文献
76.
Jean -Paul Malrieu 《Theoretical chemistry accounts》1982,62(2):163-174
Using the canonical problem of N separate electron pairs, theN dependence of approximate multireference CI schemes is analyzed. When the DCI is taken as multireference space, the second order Quasi Degenerate Many Body Perturbation Theory (QD(MB)PT) gives twice the expected correction, while the CIPSI algorithm gives 66% of it, and the MRDCI a vanishing part of it. A modified QDPT effective hamiltonian, and a combination of CIPSI and QDPT algorithms seem to give better trends. 相似文献
77.
InteractionbetweenMetalinMetalloEnzymeandSmallBiologicalMolecules¥HuJie-Han;ShuZan-Yong;TaoLi-Mei;ChengGuo-Bao(DalianInstitut... 相似文献
78.
The excess Gibb's free energy of mixing, GE, for ethyl iodide+toluene at 25°C have been obtained from the measured vapor pressuure data. The HE and GE values for ethyl iodide+toluene are positive throughout the ethyl iodide concentration range and GE>HE. The results have been analyzed in terms of Flory and ideal associated model theory of nonelectrolyte solutions. It has been observed that the ideal associated model approach which assumes the presence of AN and A2B molecular species describes well (within±10 J-mol–1 in the worst case) the general dependence of HE on XA (mole fraction of ethyl iodide) over the whole composition range for ethyl iodide+toluene mixtures. The equilibrium constants for A+A AB and 2A+BA2B reactions along with the enthalpies of formation of AB and A2B molecular species have been calculated. 相似文献
79.
Tse-Chiang Chang 《中国化学会会志》1996,43(4):371-374
The homonuclear diatomic molecules are the simplest systems having both the σ framework and the lone pair orbitals na and b for investigating their through space and through bond interaction. The striking orbital energy order ng~ na+ nb > nn ~ na - nb has been accounted for by the through bond interaction. However, when the p-content in the lone pair orbitals na and nb decreases, one may have the reverse orbital energy order: ng < ng. A reverse orbital energy order has been found in F2 and Cl2, whose na and nb are almost pure s-type atomic orbitals. The reverse order also occurs in molecule N2 when the internuclear distance is larger man 1.5 Å. It is also found that the detail through space and through bond interaction and the eventual orbital energy order for ng and nu can be accounted for by the Fock operator within the localized molecular orbital space. 相似文献
80.