基于裂开型核酸适配体的液晶生物传感检测三磷酸腺苷

利用“适配体-目标分子-适配体”的“三明治”夹心方式构建液晶生物传感检测三磷酸腺苷(ATP). 将ATP核酸适配体片段作为捕获探针固定在经TEA/DMOAP混合组装膜修饰的玻片基底表面, 当ATP存在时, 裂开的两部分核酸适配体与ATP结合形成双链结构, 有效诱导液晶分子取向发生变化从而引起光学信号的亮度及颜色发生变化, 实现对ATP的检测, 该方法在ATP浓度为10 nmol/L时仍可观测到明显的光学信号变化. 这种“适配体-目标分子-适配体”的“三明治”夹心式液晶生物传感方法具有无需标记, 操作简单等特点, 在快速检测小分子等物质领域中有广泛的应用前景.     

Electrochemical aptamer sensor for highly sensitive detection of mercury ion with Au/Pt@carbon nanofiber‐modified electrode

In this paper, an electrochemical aptamer sensor was proposed for the highly sensitive detection of mercury ion (Hg²⁺). Carbon nanofiber (CNF) was prepared by electrospinning and high‐temperature carbonization, which was used for the loading of platinum nanoparticles (PtNPs) by the hydrothermal method. The Pt@CNF nanocomposite was modified on the surface of carbon ionic liquid electrode (CILE) to obtain Pt@CNF/CILE, which was further decorated by gold nanoparticles (AuNPs) through electrodeposition to get Au/Pt@CNF/CILE. Self‐assembling of the thiol‐based aptamer was further realized by the formation of Au‐S bond to get an electrochemical aptamer sensor (Aptamer/Au/Pt@CNF/CILE). Due to the specific binding of aptamer probe to Hg²⁺ with the formation of T‐Hg²⁺‐T structure, a highly sensitive quantitative detection of Hg²⁺ could be achieved by recording the changes of current signal after reacting with Hg²⁺ within the concentration range from 1.0 × 10^?15 mol/L to 1.0 × 10^?6 mol/L and the detection limit of 3.33 × 10^?16 mol/L (3σ). Real water samples were successfully analyzed by this method.     

金属有机骨架材料-核酸适配体荧光法检测沙门氏菌

基于金属有机骨架材料(Uio-66-NH2)的荧光猝灭特性以及对核酸适配体的吸附性,结合核酸适配体的高亲和力与高特异性识别能力,构建了针对沙门氏菌检测的荧光生物传感器,当有荧光素修饰的沙门氏菌、适配体被材料吸附到表面时,由于材料诱导电子转移猝灭了荧光素的荧光,若溶液中存在沙门氏菌,则沙门氏菌与其适配体特异性结合后从材料表面脱附,材料与荧光素之间的电子转移过程被切断,荧光素的荧光恢复。基于此原理构建的荧光传感器的信号与沙门氏菌浓度的对数在101~105cfu/m L范围内呈良好的线性关系,检出限(S/N=3)为7 cfu/m L,将该方法用于虾肉样品中沙门氏菌的检测,加标回收率为90.0%~108.0%,该传感器对沙门氏菌有较好的选择性与灵敏度。     

A Chimeric DNA/RNA Antiparallel Quadruplex with Improved Stability

Nucleic acid quadruplexes are proposed to play a role in the regulation of gene expression, are often present in aptamers selected for specific binding functions and have potential applications in medicine and biotechnology. Therefore, understanding their structure and thermodynamic properties and designing highly stable quadruplexes is desirable for a variety of applications. Here, we evaluate DNA→RNA substitutions in the context of a monomolecular, antiparallel quadruplex, the thrombin-binding aptamer (TBA, GGTTGGTGTGGTTGG) in the presence of either K⁺ or Sr²⁺. TBA predominantly folds into a chair-type configuration containing two G-tetrads, with G residues in both syn and anti conformation. All chimeras with DNA→RNA substitutions (G→g) at G residues requiring the syn conformation demonstrated strong destabilization. In contrast, G→g substitutions at Gs with anti conformation increased stability without affecting the monomolecular chair-type topology. None of the DNA→RNA substitutions in loop positions affected the quadruplex topology; however, these substitutions varied widely in their stabilizing or destabilizing effects in an unpredictable manner. This analysis allowed us to design a chimeric DNA/RNA TBA construct that demonstrated substantially improved stability relative to the all-DNA construct. These results have implications for a variety of quadruplex-based applications including for the design of dynamic nanomachines.     

Enhanced Peroxidase‐Like Properties of Graphene–Hemin‐Composite Decorated with Au Nanoflowers as Electrochemical Aptamer Biosensor for the Detection of K562 Leukemia Cancer Cells

Graphene composites with hemin and gold nanoparticles show a better performance for hydrogen peroxide decomposition compared to that of the three components alone or duplex/hybrid complexes. Our previous studies showed that the morphology of the Au nanoparticles may greatly influence the catalytic activity of graphene‐family peroxidase mimics. Recently, we found that Au nanoflowers could grow in situ and form on the surface of hemin/RGO (reduced graphene oxide). The prickly morphology of this Au nanoflower brought a higher catalytic ability with enhanced kinetic parameters than traditional Au nanoparticles that showed a smooth surface. Therefore, based on this discovery, a smart electrochemical aptamer biosensor for K562 leukemia cancer cells was further presented with good performance in selectivity and sensitivity attributed to the excellent mimetic peroxidase catalytic activity of this newly synthesized Au nanoflower decorated graphene–hemin composite (H‐RGO‐Au NFs).     

Bioactive paper provides a low-cost platform for diagnostics

Bioactive paper includes a range of potential paper-based materials that can perform analytical functions normally reserved for multi-well plates in the laboratory or for portable electronic devices. Pathogen detection is the most compelling application. Simple paper-based detection, not requiring hardware, has the potential to have impacts in society, ranging from the kitchen to disasters in the developing world. Bioactive-paper research is an emerging field with significant efforts in Canada, USA (Harvard), Finland and Australia.Following a brief introduction to the material and surface properties of paper, I review the literature. Some of the early work exploits the porosity of paper to generate paper-based microfluidics (“paperfluidics”) devices. I exclude from this review printed electronic devices and plastics-supported devices.     

基于Ru(bpy)2+3/AuNPs/SWCNTs/腺苷适配体电化学发光生物传感器用于腺苷的检测

利用AuNPs/Nafion复合膜技术固定Ru(bpy)2+3,采用羧基化碳纳米管固定氨基化腺苷适配体,制备腺甘电化学发光生物传感器.采用循环伏安法和电化学发光法对传感器进行表征.结果表明,此传感器具有良好的稳定性和重现性.腺苷与传感器作用后,腺苷与其适配体形成G四面体结构,Ru(bpy)2+3的电化学发光强度降低.在最佳实验条件下,电化学发光强度降低量与腺苷浓度的负对数在1.0×10-11~1.0×10-7 mol/L范围内呈良好的线性关系,线性方程为ΔIECL=-890lgC-5050,检出限(S/N=3)为5.0 × 10-12 mol/L.对1.0 × 10-10 mol/L腺苷平行测定11次,相对标准偏差为2.7%.用于尿液中腺苷的测定,加标回收率在 97.1%~110.0%之间.     

Interactions of DNA with graphene and sensing applications of graphene field-effect transistor devices: A review

Graphene field-effect transistors (GFET) have emerged as powerful detection platforms enabled by the advent of chemical vapor deposition (CVD) production of the unique atomically thin 2D material on a large scale. DNA aptamers, short target-specific oligonucleotides, are excellent sensor moieties for GFETs due to their strong affinity to graphene, relatively short chain-length, selectivity, and a high degree of analyte variability. However, the interaction between DNA and graphene is not fully understood, leading to questions about the structure of surface-bound DNA, including the morphology of DNA nanostructures and the nature of the electronic response seen from analyte binding. This review critically evaluates recent insights into the nature of the DNA graphene interaction and its affect on sensor viability for DNA, small molecules, and proteins with respect to previously established sensing methods. We first discuss the sorption of DNA to graphene to introduce the interactions and forces acting in DNA based GFET devices and how these forces can potentially affect the performance of increasingly popular DNA aptamers and even future DNA nanostructures as sensor substrates. Next, we discuss the novel use of GFETs to detect DNA and the underlying electronic phenomena that are typically used as benchmarks for characterizing the analyte response of these devices. Finally, we address the use of DNA aptamers to increase the selectivity of GFET sensors for small molecules and proteins and compare them with other, state of the art, detection methods.     

Fluorescence Polarization Based Nucleic Acid Testing for Rapid and Cost‐Effective Diagnosis of Infectious Disease

A new nucleic acid detection method was developed for a rapid and cost‐effective diagnosis of infectious disease. This approach relies on the three unique elements: 1) detection probes that regulate DNA polymerase activity in response to the complementary target DNA; 2) universal reporters conjugated with a single fluorophore; and 3) fluorescence polarization (FP) detection. As a proof‐of‐concept, the assay was used to detect and sub‐type Salmonella bacteria with sensitivities down to a single bacterium in less than three hours.     

Solid-state electrochemiluminescence protein biosensor with aptamer substitution strategy

One solid-state electrochemiluminescence(ECL) protein biosensor based on the competing reaction and substitute reaction between protein-to-DNA aptamer and DNA-to-DNA aptamer was proposed.Additionally,the biosensor was based on ECL photo-quenching effect of ferrocene(Fc) to tris(2,2'-bipyridyl)ruthenium(II)(Ru(bpy)32+).It was built up by modification of Au nanoparticles(AuNPs) and Ru(bpy)3 2+ on one Au electrode firstly,and then self-assembly of one special double-stranded DNA(dsDNA) onto the electrode.This ...