Design of Monodisperse and Well‐Defined Polypeptide‐Based Polyvalent Inhibitors of Anthrax Toxin

The design of polyvalent molecules, presenting multiple copies of a specific ligand, represents a promising strategy to inhibit pathogens and toxins. The ability to control independently the valency and the spacing between ligands would be valuable for elucidating structure–activity relationships and for designing potent polyvalent molecules. To that end, we designed monodisperse polypeptide‐based polyvalent inhibitors of anthrax toxin in which multiple copies of an inhibitory toxin‐binding peptide were separated by flexible peptide linkers. By tuning the valency and linker length, we designed polyvalent inhibitors that were over four orders of magnitude more potent than the corresponding monovalent ligands. This strategy for the rational design of monodisperse polyvalent molecules may not only be broadly applicable for the inhibition of toxins and pathogens, but also for controlling the nanoscale organization of cellular receptors to regulate signaling and the fate of stem cells.     

Discontinuous native protein gel electrophoresis

Analysis of the oligomeric state of a native protein usually requires analytical ultracentrifugation or repeated gel filtration to calculate the protein's size. We have developed a discontinuous native protein gel electrophoresis system that allows the separation of even basic proteins according to their size, oligomeric state, and shape. This gel system combines the addition of negative charges to the proteins by Serva Blue G with a discontinuous buffer system and gradient gels. As in SDS-PAGE, chloride constitutes the high mobility anion in the gel and anode buffer. However, for sample focusing this system employs histidine instead of glycine as the slow dipolar ion following from the cathode buffer to improve migration of basic proteins. In addition, proteins run into gel pores corresponding to their size and shape in the gradient gel. Using this gel system, we show that the polypyrimidine tract-binding protein (PTB) is a monomer.     

Polypeptide/Multiwalled carbon nanotube hybrid complexes stabilized through noncovalent bonding interactions

In this study, we used click chemistry to synthesize new linear polypeptide‐g‐pyrene polymers from a mono‐azido‐functionalized pyrene derivative (N₃‐Py) and several poly(γ‐propargyl‐l ‐glutamate) (PPLG) oligomers. Incorporating the pyrene units as side chains enhanced the α‐helical conformations of these PPLG oligomers in the solid state, as determined using Fourier transform infrared (FTIR) spectroscopy; it also increased the temperature stability of the α‐helical secondary structures of the grafted PPLG oligomers, relative to those of the pure PPLG species, as revealed through temperature‐dependent FTIR spectroscopic analyses. In addition, the thermal properties of the PPLG‐g‐Py polypeptides (e.g., glass transition temperatures increased by ca. 100 °C) were superior to those of pure PPLG oligomers. Mixing the PPLG‐g‐Py oligomers with multiwalled carbon nanotubes (MWCNTs) in dimethylformamide led to the formation of highly dispersible PPLG‐g‐Py/MWCNT organic/inorganic hybrid complex materials. Fluorescence emission spectra revealed significant π–π stacking between the PPLG‐g‐Py oligomers and the MWCNTs in these complexes. © 2013 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2014 , 52, 321–329     

Self‐assembly and secondary structures of linear polypeptides tethered to polyhedral oligomeric silsesquioxane nanoparticles through click chemistry

In this study, we used click chemistry to synthesize a new macromolecular self‐assembling building blocks, linear polypeptide‐b‐polyhedral oligomeric silsesquioxane (POSS) copolymers, from a mono‐azido–functionalized POSS (N₃‐POSS) and several alkyne‐poly(γ‐benzyl‐L ‐glutamate) (alkyne‐PBLG) systems. The incorporation of the POSS unit at the chain end of the PBLG moiety allowed intramolecular hydrogen bonding to occur between the POSS and PBLG units, thereby enhancing the α‐helical conformation in the solid state, as determined through Fourier transform infrared spectroscopy and wide‐angle X‐ray diffraction analyses. POSS‐b‐PBLG underwent hierarchical self‐assembly, characterized using small‐angle X‐ray scattering, to form a bilayer‐like nanostructure featuring α‐helical or β‐sheet conformations and POSS aggregates. Thermogravimetric analysis indicated that the thermal degradation temperature increased significantly after incorporation of the POSS moiety, which presumably formed an inorganic protection layer on the nanocomposite's surface. © 2011 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2011     

Thermoreversible gelation of helical polypeptide/single‐walled carbon nanotubes and their solid‐state structures

Single‐walled carbon nanotubes (SWCNTs) have been functionalized with poly(γ‐benzyl‐L ‐glutamate)s (PBLGs) having well‐defined polymer molecular weight (M_n = 7.5–21.1 kg·mol^?1) and molecular weight distribution (PDI = 1.05–1.20) by a graft‐to method. Toluene solutions containing 5 wt % free PBLG and variable amounts of PBLG‐functionalized SWCNTs (PBLG‐SWCNTs) form gels at room temperature. Differential scanning calorimetry (DSC) analysis reveals that the gelation occurs thermoreversibly, in accord with previous studies on the pristine PBLG/toluene gels. The heat of gel melting (ΔH_m) is slightly elevated for the composite gels compared with the pristine gel, which suggests enhanced interactions between PBLGs in the former. But the gelation temperatures of the composites are unaffected by the presence of PBLG‐SWCNTs. Small‐angle X‐ray scattering (SAXS) analysis of the composite and pristine gels at different temperatures by the Guinier method suggests that PBLG‐SWCNTs promote interactions between PBLG rods, as indicated by the larger PBLG bundle size with increasing PBLG‐SWCNT content in the gel and the melt state. W/SAXS analysis of the dry gels reveals that PBLG‐SWCNTs induce significant changes in the PBLG packing order, resulting in a nematic phase, in contrast to a weakly ordered smectic C phase containing tilted PBLG rods that is observed in the pristine gel. © 2011 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2011     

“互联网+”背景下基础化学原理实验在线学习与考试系统的开发与实践

在移动互联网的飞速发展与智能手机等移动终端日趋普及的情况下,设计开发了基于移动端的基础化学原理实验在线学习与考试系统。该系统包括化学实验室安全教育与考试、实验基础理论学习、试题库资源、移动端在线考试、成绩管理和统计分析等五大功能。该系统的开发建设顺应了"互联网+教育"的发展趋势,有利于学生自主学习,节约考试资源。     

Characterization of several stationary phases prepared by thermal immobilization of poly(methyltetradecylsiloxane) onto silica surfaces

Variations of a thermal immobilization procedure using poly(methyltetradecilsiloxane) and silica produced fourteen stationary phases with carbon contents of 4-18%. The stationary phases were chromatographically evaluated with the Engelhardt, SRM 870 and Tanaka tests. Classifications using USP and Euerby procedures indicate that the new immobilized phases are different from most commercial phases although there was some similarity with phases that have high ion-exchange interactions. The retention mechanism involved in the separation of basic solutes on several of the new stationary phases was studied by varying pH, type of Lewis base and the ionic strength of the eluent. The separations are strongly influenced by the chemistry of the accessible free silanols. The stationary phases present good selectivity at intermediate pH where the basic analytes were protonated, suggesting use of intermediate pH for these separations. Stability tests show that the stationary phases have poor stability at very high pH, even at 23°C, but good stability in acidic mobile phases, even at 75°C, as expected for an immobilized polymer stationary phase.     

Glycolysis of poly(ethylene terephthalate) (PET) using basic ionic liquids as catalysts

The glycolysis of poly(ethylene terephthalate) (PET) was studied using several ionic liquids and basic ionic liquids as catalysts. The basic ionic liquid, 1-butyl-3-methylimidazolium hydroxyl ([Bmim]OH), exhibits higher catalytic activity for the glycolysis of PET, compared with 1-butyl-3-methylimidazolium bicarbonate ([Bmim]HCO₃), 1-butyl-3-methylimidazolium chloride ([Bmim]Cl) and 1-butyl-3-methylimidazolium bromide ([Bmim]Br). FT-IR, ¹H NMR and DSC were used to confirm the main product of glycolysis was bis(2-hydroxyethyl) terephthalate (BHET) monomer. The influences of experimental parameters, such as the amount of catalyst, glycolysis time, reaction temperature, and dosages of ethylene glycol on the conversion of PET, yield of BHET were investigated. The results showed a strong influence of the mixture evolution of temperature and reaction time on depolymerization of PET. Under the optimum conditions of m(PET):m(EG): 1:10, dosage of [Bmim]OH at 0.1 g (5 wt%), reaction temperature 190 °C and time 2 h, the conversion of PET and the yield of BHET were 100% and 71.2% respectively. Balance between the polymerization of BHET and depolymerization of PET could be changed when the reaction time was more than 2 h and contents of catalyst and EG were changed.     

An improved method of ring closing metathesis in the presence of basic amines: application to the formal synthesis of (+)-lentiginosine and other piperidines and carbamino sugar analogs

A generalized method for performing ring closing metathesis in the presence of basic amines has been established and successfully used in the formal synthesis of (+)-lentiginosine as well as some valuable intermediates for the synthesis of several other azasugars and aminocyclitols.     

BOP: A basic phenylalanine‐rich oligo‐peptide located on the surface of glycolate oxidase influences its pI values

Glycolate oxidase (GO) consists of identical subunits and therefore should show one definite pI value, but the isolated GO exhibited a range of pIs. This study investigated the underlying cause of this phenomenon. GO was purified and showed a molecular weight of 40 kDa by SDS‐PAGE. Elution behavior on DEAE‐cellulose chromatography and cellulose acetate membrane electrophoresis indicated that the purified GO was highly basic (pI>10.0). Repeated IEF and cIEF analysis showed that the pI of the purified GO was in the range of 10.0–3.25, either in a smear form or as distinct bands. 2‐DE analysis showed that the 40 kDa subunit of GO displayed variable pIs from 9.6 to 3.65. It was likely that the purified GO was actually a complex consisted of GO and an unknown protein. CE‐SDS, SDS‐cellulose acetate membrane electrophoresis and amino acid compositions indicated that the unknown protein was a highly basic polymer (BP) consisting of basic and phenylalanine‐rich oligo‐peptide (BOP). Many BOPs are located on the surface of the acidic GO via ionic and hydrophobic interactions and formed GO‐BOP complex (GC), resulting in a highly basic GC although GO itself was acidic. This hypothesis was further supported by the facts that anti‐GC serum failed to recognize GO, and GC showed a peak at 257 nm although GO has few phenylalanine residues. Irregular and incomplete disassociation between GO and BOP was observed in IEF and cIEF, resulting in various intermediates with different ratios of GO/BOP, which could be the reason for the range of pIs observed for GO.