Trans or (Unusual) Cis Geometry in d(2) Octahedral Dioxo Complexes. A DFT Study

Geometry optimization of the cis and the trans isomers of several octahedral dioxo complexes of d(2) electronic configuration are performed using the gradient-corrected density functional theory (B3LYP and, for some key structures, BP86). With only monodentate sigma donor ligands (ReO(2)(NH(3))(4)(+), 7), the usual energy order is found (i.e., the trans isomer is the most stable). Complexes with a chelating bidentate ligand, OsO(2)(OCH(2)CH(2)O)(NH(3))(2) (10) and ReO(2)(HN=CHCH=NH)(NH(3))(2)(+) (11), are used as models for the experimental complexes 5 and 2 in which the arrangement of the O=M=O unit is trans and cis, respectively. Our calculations actually show an inversion of the relative energy of the two isomers in going from 10 to 11: while the trans isomer is found to be the most stable in 10, the unusual cis diamagnetic isomer is favored by about 29 kcal mol(-)(1) in 11. This result is traced to the geometric and electronic properties of the bidentate ligand, in particular an acute bite angle and good pi acceptor character. In complex 14 with a bipyridine chelating ligand (weaker pi acceptor than diaza-1,4-butadiene in 11), this energy difference is, however, reduced to 7.5 kcal mol(-)(1) (partial geometry optimization).     

Theoretical Evaluation of Steric Effects in [ReH(5)(PR(3))(2)(SiR(3))(2)] Complexes with the IMOMM Method

A theoretical study including full geometry optimizations is carried out at the IMOMM(MP2:MM3) (IMOMM = integrated molecular orbital molecular mechanics) computational level on the [ReH(5)(PPh(i)()Pr(2))(2)(SiHPh(2))(2)] and [ReH(5)(PCyp(3))(2)(SiH(2)Ph)(2)] systems, the results being compared with available experimental diffraction data, as well as with MP2 results on the model system [ReH(5)(PH(3))(2)(SiH(3))(2)]. A simple scheme for the analysis of the relative weight of different contributions to the "steric" distortion is also proposed and applied to the same [ReH(5)(PPh(i)()Pr(2))(2)(SiHPh(2))(2)] and [ReH(5)(PCyp(3))(2)(SiH(2)Ph)(2)] species.     

Use of combined mass spectrometry methods for the characterization of a new variant of human hemoglobin: The double mutant hemoglobin villeparisis β77(EF1) His → Tyr, β 80 (EF4) Asn → Ser

Hemoglobin Villeparisis was found during a systematic measurement of glycated hemoglobin. Electrospray mass spectra of the globin indicate an apparently unchanged molecular weight within the error range (0.01%). The tryptic digest of the β chain shows a chromatographically abnormal βT-9 peptide. The mass-to-charge ratio value of its [M+H]⁺ ion, as measured by liquid secondary ionization mass spectrometry, is one mass unit lower than that of the normal βT-9. However, the electrospray mass spectrum of this peptide exhibits mainly a doubly charged ion, whereas the normal βT-9 gives a triply charged ion. None of the allowed single amino acid substitutions for a 1-u shift down (Glu → Gln, Asp → Asn, or Asn → Ile) can explain the suppression of one protonation site. This can be due only to the replacement of the internal histidine by a nonbasic residue. Thus at least two amino acid exchanges occur within the same peptide: one involves the internal histidine, and the sum of the mass shifts is ?1 u. Consideration of the βT-9 sequence and taking account for the genetic code rules, the only possibility was ¹¹His → Tyr (+26 mass shift) associated with ¹⁴Asn → Ser (?27 mass shift). This conclusion was consistent with the tandem mass spectrum of the [M+H]⁺ ion and was further confirmed by chemical microsequencing.     

Mobilité conformationnelle et migration des liaisons π dans le [24]annulène

Conformational Mobility and Migration of the π Bonds of the [24]annulene. The configuration and the conformation of [24]annulene have been determined after a detailed analysis of its ¹H-NMR spectrum recorded at −95°. At this temperature, molecular dynamics is practically frozen, and the spectrum can be correctly simulated considering eight magnetic sites with the relevant couplings. The [24]annulene exhibits alternation of the double and the single bonds with the CTTTCTTTCTTT sequence (C=cis, T=trans) expressing the connectivity of the double bonds. The signal of the 9 protons pointing inside the ring is 7.72 ppm at lower field than the signal of the 15 outer protons; this indicates a marked paramagnetic ring current. Molecular dynamics is revealed by the dependence of the spectrum upon the temperature; the simulation of the line shape of these spectra indicates that the [24]annulene in solution exists as an equilibrium of two conformers A and B ( B / A ≤0.05), both having the same configuration. Each of these conformers undergoes two isodynamic processes: a migration of the π bonds on the adjacent single bonds (bond shift) described by V and a conformational mobility described by K. The two conformers interconvert extremely rapidely. Conformer A complies with C_3h symmetry, conformer B with C₃ symmetry. The enthalpy, entropy, and free energy of activation for the processes described by V and K in the major conformer A have been determined: these processes are slower than those observed in [16]annulene. From their values, we could deduce that the resonance energy in the [24]-7³annulene is negative and of the order of −9 to −10 kcal⋅mol⁻¹.     

Thiazonaphthalimide derivatives: Synthesis and interaction with DNA

The synthesis of several thiazonaphthalimide derivatives is described. The exclusive formation of angular rather than linear isomers was unequivocally demonstrated by NMR and single crystal X-ray diffraction. Their photophysical properties and ability to bind calf-Thymus DNA with affinities in the range of 10⁴ makes them interesting candidates to probe DNA by fluorescence.     

Synthesis and crystal structure of [(η3-C3H5)(CO)2Mo(μ-S2CPCy3)-Mo(η3-CH2CMeCH2)(CO)2]

A novel dimolybdenum complex [(³-C₃H₅)(CO)₂Mo(-S₂CPCy₃)Mo(³-CH₂CMeCH₂)(CO)₂], obtained by reacting the [(CO)₂(³-C₃H₅)Mo(-S₂CPCy₃)Mo(CO)₃]^– anion with an excess of ClCH₂CMe=CH₂, has been characterized by i.r., ³¹P{¹H}, ¹H- and ¹³C-n.m.r. spectroscopy and by elemental analysis. The crystal structure of the complex, determined by X-ray diffraction, shows a definite preference for the central carbon of the S₂CPCy₃ bridge to bind to the Mo(2) atom coordinated by ³-2-methylallyl, rather than the Mo(1) atom attached to unsubstituted ³-allyl ligand.     

Ferromagnetic Coupling through Spin Polarization in a Dinuclear Copper(II) Metallacyclophane

No Abstract     

Insight into Signal Response of Protein Ions in Native ESI-MS from the Analysis of Model Mixtures of Covalently Linked Protein Oligomers

Native ESI-MS is increasingly used for quantitative analysis of biomolecular interactions. In such analyses, peak intensity ratios measured in mass spectra are treated as abundance ratios of the respective molecules in solution. While signal intensities of similar-size analytes, such as a protein and its complex with a small molecule, can be directly compared, significant distortions of the peak ratio due to unequal signal response of analytes impede the application of this approach for large oligomeric biomolecular complexes. We use a model system based on concatenated maltose binding protein units (MBPn, n = 1, 2, 3) to systematically study the behavior of protein mixtures in ESI-MS. The MBP concatamers differ from each other only by their mass while the chemical composition and other properties remain identical. We used native ESI-MS to analyze model mixtures of MBP oligomers, including equimolar mixtures of two proteins, as well as binary mixtures containing different fractions of the individual components. Pronounced deviation from a linear dependence of the signal intensity with concentration was observed for all binary mixtures investigated. While equimolar mixtures showed linear signal dependence at low concentrations, distinct ion suppression was observed above 20 μM. We systematically studied factors that are most often used in the literature to explain the origin of suppression effects. Implications of this effect for quantifying protein–protein binding affinity by native ESI-MS are discussed in general and demonstrated for an example of an anti-MBP antibody with its ligand, MBP.

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Convenient synthesis of substituted benzo[e][1,2,4]- or [d][1,2,6]oxadiazepines,benzo[f][1,3,5]triazocines from N-aryliminoesters

We report herein a short and efficient synthesis of benz[e][1,2,4]- or [d][1,2,6]oxadiazepines and benzo[f][1,3,5]triazocines from easily prepared N-aryl iminoesters. The strategy involves a bis-nucleophile reagent (hydroxylamine or guanidine) that promotes a one-step ring closure from the starting functionalized iminoesters.     

Spectrophotometric and Nuclear Magnetic Resonance Study of Temperature- and Pressure-induced Changes in the Intimate Solvation of Neodymium (III) in N,N-Dimethylformamide and Trimethylphosphate

The temperature- and pressure-dependent equilibria for the addition of an extra N, N-dimethylforrnamide (DMF) or trimethylphosphate (TMP) ligand onto [Nd (DMF)₈]³⁺- and [Nd(TMP)₆]³⁺-species respectively have been measured by visible spectrophotometry. Complementary NMR. studies on other lanthanide ions show a gradual shift in preference for the lower coordination number across the lanthanide series.