Interplay of Hole Transfer and Host–Guest Interaction in a Molecular Dyad and Triad: Ensemble and Single‐Molecule Spectroscopy and Sensing Applications

A new molecular dyad consisting of a Cy5 chromophore and ferrocene (Fc) and a triad consisting of Cy5, Fc, and β‐cyclodextrin (CD) are synthesized and their photophysical properties investigated at both the ensemble and single‐molecule levels. Hole transfer efficiency from Cy5 to Fc in the dyad is reduced upon addition of CD. This is due to an increase in the Cy5‐Fc separation (r) when the Fc is encapsulated in the macrocyclic host. On the other hand, the triad adopts either a Fc‐CD inclusion complex conformation in which hole transfer quenching of the Cy5 by Fc is minimal or a quasi‐static conformation with short r and rapid charge transfer. Single‐molecule fluorescence measurements reveal that r is lengthened when the triad molecules are deposited on a glass substrate. By combining intramolecular charge transfer and competitive supramolecular interaction, the triad acts as an efficient chemical sensor to detect different bioactive analytes such as amantadine hydrochloride and sodium lithocholate in aqueous solution and synthetic urine.     

Kinetics of the solvolysis of [Co(Rpy)4Cl4]+ with R = 4-t-Bu, 3-Me or 3-Et in mixtures of urea with water

Summary The kinetics of the solvolysis of complex ions trans-[Co(Rpy)₄Cl₂]⁺, with R = 4-t-Bu, 3-Me and 3-Et, have been investigated in mixtures formed by adding urea to water, which enhances the dielectric constant and decreases solvent structure. Differential effects of the changes in solvent structure on the initial and transition states are found to be important factors controlling changes in the rate constant with solvent composition. The variation of the enthalpy and the entropy of activation with solvent composition are contrasted with their variations found for the solvolysis of [Co(Rpy)₄Cl₂]⁺ in mixtures where solvent structure is enhanced by additions of a co-solvent to water. The application of a free energy cycle to the process of the initial state going to the transition state suggests that the Co³⁺ cation in the transition state is more stable than the Co³⁺ cation in the initial state in the water + urea mixtures.     

Gas‐phase chemistry of dihydromyrcenol with ozone and OH radical: Rate constants and products

A bimolecular rate constant, k_{OH + dihydromyrcenol}, of (38 ± 9) × 10^?12 cm³ molecule^?1 s^?1 was measured using the relative rate technique for the reaction of the hydroxyl radical (OH) with 2,6‐dimethyl‐7‐octen‐2‐ol (dihydromyrcenol,) at 297 ± 3 K and 1 atm total pressure. Additionally, an upper limit of the bimolecular rate constant, k, of approximately 2 × 10^?18 cm³ molecule^?1 s^?1 was determined by monitoring the decrease in ozone (O₃) concentration in an excess of dihydromyrcenol. To more clearly define part of dihydromyrcenol's indoor environment degradation mechanism, the products of the dihydromyrcenol + OH and dihydromyrcenol + O₃ reactions were also investigated. The positively identified dihydromyrcenol/OH and dihydromyrcenol/O₃ reaction products were acetone, 2‐methylpropanal (O?CHCH(CH₃)₂), 2‐methylbutanal (O?CHCH(CH₃)CH₂CH₃), ethanedial (glyoxal, HC(?O)C(?O)H), 2‐oxopropanal (methylglyoxal, CH₃C(?O)C(?O)H). The use of derivatizing agents O‐(2,3,4,5,6‐pentafluorobenzyl)hydroxylamine (PFBHA) and N,O‐bis(trimethylsilyl)trifluoroacetamide (BSTFA) clearly indicated that several other reaction products were formed. The elucidation of these other reaction products was facilitated by mass spectrometry of the derivatized reaction products coupled with plausible dihydromyrcenol/OH and dihydromyrcenol/O₃ reaction mechanisms based on previously published volatile organic compound/OH and volatile organic compound/O₃ gas‐phase reaction mechanisms. © 2006 Wiley Periodicals, Inc. *

1 This article is a US Government work and, as such, is in the public domain of the United States of America

Int J Chem Kinet 38: 451–463, 2006     

Prospects for ultracold carbon via charge exchange reactions and laser cooled carbides

Strategies to produce an ultracold sample of carbon atoms are explored and assessed with the help of quantum chemistry. After a brief discussion of the experimental difficulties using conventional methods, two strategies are investigated. The first attempts to exploit charge exchange reactions between ultracold metal atoms and sympathetically cooled C(+) ions. Ab initio calculations including electron correlation have been conducted on the molecular ions [LiC](+) and [BeC](+) to determine whether alkali or alkaline earth metals are a suitable buffer gas for the formation of C atoms but strong spontaneous radiative charge exchange ensure they are not ideal. The second technique involves the stimulated production of ultracold C atoms from a gas of laser cooled carbides. Calculations on LiC suggest that the alkali carbides are not suitable but the CH radical is a possible laser cooling candidate thanks to very favourable Frank-Condon factors. A scheme based on a four pulse STIRAP excitation pathway to a Feshbach resonance is outlined for the production of atomic fragments with near zero centre of mass velocity.     

Analysis of amphetamine and methamphetamine in municipal wastewater influent and effluent using weak cation‐exchange SPE and LC‐MS/MS

Amphetamine and methamphetamine are emerging contaminants—those for which no regulations currently require monitoring or public reporting of their presence in our water supply. In this research, a protocol for weak cation‐exchange (WCX) SPE coupled with LC‐MS/MS was developed for determination of emerging contaminants amphetamine and methamphetamine in a complex wastewater matrix. Gradient LC parameters were adjusted to yield baseline separation of methamphetamine from other contaminants. Methamphetamine‐D5 was used as the internal standard (IS) to compensate for sample loss during SPE and for signal loss during MS (matrix effects). Recoveries were 102.1 ± 7.9% and 99.4 ± 4.0% for amphetamine and methamphetamine, respectively, using WCX sorbent. Notably, methamphetamine was determined to be present in wastewater influent at each sampling date tested. Amphetamine was present in wastewater influent on two of four sampling dates. Amphetamine concentrations ranged from undetectable to 86.4 ng/L in influent, but it was undetectable in wastewater effluent. Methamphetamine was detected in influent at concentrations ranging from 27.0–60.3 ng/L. Methamphetamine concentration was reduced but incompletely removed at this facility. Although absent in one post‐UV effluent sample, concentrations of methamphetamine ranged from 10.8–14.8 ng/L.     

Theoretical study on the structure, stability, and electronic properties of the guanine-Zn-cytosine base pair in M-DNA

M-DNA is a type of metalated DNA that forms at high pH and in the presence of Zn, Ni, and Co, with the metals placed in between each base pair, as in G-Zn-C. Experiments have found that M-DNA could be a promising candidate for a variety of nanotechnological applications, as it is speculated that the metal d-states enhance the conductivity, but controversy still clouds these findings. In this paper, we carry out a comprehensive ab initio study of eight G-Zn-C models in the gas phase to help discern the structure and electronic properties of Zn-DNA. Specifically, we study whether a model prefers to be planar and has electronic properties that correlate with Zn-DNA having a metallic-like conductivity. Out of all the studied models, there is only one which preserves its planarity upon full geometry optimization. Nevertheless, starting from this model, one can deduce a parallel Zn-DNA architecture only. This duplex would contain the imino proton, in contrast to what has been proposed experimentally. Among the nonplanar models, there is one that requires less than 8 kcal/mol to flatten (both in gas and solvent conditions), and we propose that it is a plausible model for building an antiparallel duplex. In this duplex, the imino proton would be replaced by Zn, in accordance with experimental models. Neither planar nor nonplanar models have electronic properties that correlate with Zn-DNA having a metallic-like conductivity due to Zn d-states. To understand whether density functional theory (DFT) can describe appropriately the electronic properties of M-DNAs, we have investigated the electronic properties of G-Co-C base pairs. We have found that when self-interaction corrections (SIC) are not included the HOMO state contains Co d-levels, whereas these levels are moved below the HOMO state when SIC are considered. This result indicates that caution should be exercised when studying the electronic properties of M-DNAs with functionals that do not account for strong electronic correlations.     

Response Characteristics of Arsenic-Sensitive Bioreporters Expressing the gfp Reporter Gene

This paper describes the development of an analytical technique for arsenic analyses that is based on genetically-modified bioreporter bacteria bearing a gene encoding for the production of a green fluorescent protein (gfp). Upon exposure to arsenic (in the aqueous form of arsenite), the bioreporter production of the fluorescent reporter molecule is monitored spectroscopically. We compared the response measured as a function of time and concentration by steady-state fluorimetry (SSF) to that measured by epi-fluorescent microscopy (EFM). SSF is a bulk technique; as such it inherently yields less information, whereas EFM monitors the response of many individual cells simultaneously and data can be processed in terms of population averages or subpopulations. For the bioreporter strain used here, as well as for the literature we cite, the two techniques exhibit similar performance characteristics. The results presented here show that the EFM technique can compete with SSF and shows substantially more promise for future improvement; it is a matter of research interest to develop optimized methods of EFM image analysis and statistical data treatment. EFM is a conduit for understanding the dynamics of individual cell response vs. population response, which is not only a matter of research interest, but is also promising in the practical terms of developing micro-scale analysis.     

Preparation of Nanocrystalline Indium Antimonide Through β-Hydride Elimination from New Indium-Antimony Single-Source Precursors

The 1:1 mole ratio reaction of t-Bu₃In with Sb(SiMe₃)₃ results in the formation of the Lewis acid-base adduct t-Bu₃In Sb(SiMe₃)₃ (1), while the dimeric compound [t-Bu₂InSb(SiMe₃)₂]₂ (2) is isolated from the 1:1 reaction of t-Bu₂InCl with Sb(SiMe₃)₃. Both the 2:1 reactions of t-Bu₂InCl with Sb(SiMe₃)₃ and t-Bu₂InCl with 2 result in the formation of the mixed-bridge compound (3), however, ¹H NMR studies suggest that this compound is unstable in solution. Thermolysis of 1, 2, and t-Bu₃Ga Sb(SiMe₃)₃ (4) results in the formation of nanocrystalline InSb or GaSb through a -hydride elimination pathway.     

Quantile estimation based on nomination sampling

Nomination sampling is a sampling process in which every observation is the maximum of a random sample from some distribution. If all samples are taken from a single underlying CDF, F, data can be viewed as consisting of pairs (X_i,K_i) where K_i is the size of sample i and, given K_i=k_i, X_i is distributed according to CDF F^ki. R.A. Boyles and F.J. Samaniego (1986) developed a nonparametric maximum-likelihood estimator of F. In the present work, their approach is extended to obtain estimates of the quantiles of F and to study the limit theory and consistency properties of these estimates. These results generalize the results of T.R. Willemain (1980), who discussed the estimation of the median of F based on nomination samples