Detecting proteins complex formation using steady-state diffusion in a nanochannel

In this work, we present theoretical and experimental studies of nanofluidic channels as a potential biosensor for measuring rapid protein complex formation. Using the specific properties offered by nanofluidics, such as the decrease of effective diffusion of biomolecules in confined spaces, we are able to monitor the binding affinity of two proteins. We propose a theoretical model describing the concentration profile of proteins in a nanoslit and show that a complex composed by two bound biomolecules induces a wider diffusion profile than a single protein when driven through a nanochannel. To validate this model experimentally, we measured the increase of the fluorescent diffusion profile when specific biotinylated dextran was added to fluorescent streptavidin. We report here a direct and relatively simple technique to measure the affinity between proteins. Figure We present theoretical and experimental studies of nanofluidic channels as potential biosensors for rapidly measuring protein complex formation. Our system is based on steady-state diffusion effects which are observed inside a nanoslit.     

Microfluidic hydrogel layers with multiple gradients to stimulate and perfuse three-dimensional neuronal cell cultures

We present a simple and easy to handle PDMS microfluidic device for neuronal cell culture studies in three-dimensional hydrogel scaffolds. The hydrogel is structured in parallel layers to reconstruct cell layers close to the natural environment. Dissociated cortical neurons of embryonic rats have been cultured in 0.5% w/v agarose including 0.2% w/v alginate. The cells formed neurite networks through neighboring cell free hydrogel layers. The cell culture showed neurite outgrowth in the microfluidic channel over more than seven days in vitro without perfusion. Culturing neurons in hydrogel layers surrounded by a liquid phase containing culture medium resulted in denser neuronal networks.     

Diffraction properties of opaque disks outside and inside a laser cavity

Diffraction of symmetrical Laguerre-Gauss TEM_p0 beams incident on an opaque disk known as a stop is considered. The near- and far-field patterns are studied. Thanks to zero-field occluding, conversion from TEM₁₀ beam to dark hollow beam can be achieved with better efficiency than from a TEM₀₀ beam. It is shown that the fundamental mode of a laser cavity including a diaphragm and a stop can be TEM₀₀- or TEM₁₀-like in shape depending on their size. This result is interpreted from the new divergence hierarchy, which characterises the diffracted TEM_p0 beams emerging from the stop.     

Using the Relaxation Oscillations Principle for Simple Phonation Modeling

Well-known multimass models of vocal folds are useful to describe main behavior observed in human voicing but their principle of functioning, based on harmonic oscillation, may appear complex. This work is designed to show that a simple one-mass model ruled by laws of relaxation oscillation can also depict main behavior of glottis dynamic. Theory of relaxation oscillation is detailed. A relaxation oscillation model is assessed through a numerical simulation using conventional values for tissue characteristics and subglottal pressure. As expected, raising the mass decreases the fundamental frequency and increases the amplitude of vocal fold vibration: for a mass ranging from 0.01 to 0.4 g, F0 decreased from 297.5 to 42.5 Hz and vibrational amplitude increased from 1.26 to 3.25 mm (for stiffness k=10Nm(-1), damping r=0.015 N s m(-1), and subglottal pressure=1 kPa). Stiffness value has the opposite effect. The subglottal pressure controls the fundamental frequency with a rate ranging from 20 to 50 Hz/kPa. The vibrational amplitude is also controlled linearly by subglottal pressure from 0.22 to 0.26 mm/kPa. The range of phonation threshold pressure (PTP) is close to the values currently proposed, that is, 0.1 to 1 kPa and varies with the fundamental frequency. The relaxation oscillator is a simple and useful tool for modeling vocal fold vibration.     

In Vivo Electrical Impedance Spectroscopy of Tissue Reaction to Microelectrode Arrays

The goal of this experiment was to determine the electrical properties of the tissue reaction to implanted microelectrode arrays. We describe a new method of analyzing electrical impedance spectroscopy data to determine the complex impedance of the tissue reaction as a function of postimplantation time. A model is used to extract electrical model parameters of the electrode-tissue interface, and is used to isolate the impedance of the tissue immediately surrounding the microelectrode. The microelectrode arrays consist of microfabricated polyimide probes, incorporating four 50-mum-diameter platinum microelectrodes. The devices were implanted in the primary motor cortex of adult rats, and measurements were performed for 12 weeks. Histology was performed on implants at three time points in one month. Results demonstrate that the tissue reaction causes a rapid increase in bioimpedance over the first 20 days, and then stabilizes. This result is supported by histological data.     

Fluorenone‐Based Molecules for Bulk‐Heterojunction Solar Cells: Synthesis,Characterization, and Photovoltaic Properties

A series of four conjugated molecules consisting of a fluorenone central unit symmetrically coupled to different oligothiophene segments are conceptually designed and synthesized to provide new electroactive materials for application in photovoltaic devices. The combination of electron‐donating oligothiophene building blocks with an electron‐accepting fluorenone unit results in the emergence of a new band assigned to an intramolecular charge transfer transition that gives rise to the extension of the absorption spectral range of the resulting molecules. Detailed spectroscopic and voltammetric investigations show that all studied molecules have highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) level positions, which make them good candidates for the application as electron‐donors in bulk‐heterojunction photovoltaic cells, with (6,6)‐phenyl‐C61‐butyric acid methyl ester (PCBM)‐C₆₀ as electron acceptor component. Moderate device performances, with power conversion efficiencies (PCEs) comprised between 0.3 and 0.6%, were obtained with rigid molecules, containing either the bridging units between the thiophene rings, i.e., (2,7‐bis(4,4′‐dioctyl‐cyclopenta[2,1‐b:3,4‐b′]dithiophen‐2‐yl)‐fluoren‐9‐one (SCPTF) and 2,7‐bis(4‐(dioctylmethylene)‐cyclopenta[2,1‐b:3,4‐b′]dithiophen‐5‐yl)‐fluoren‐9‐one (MCPTF) or a vinylene unit 2,7‐bis(5‐[(E)‐1,2‐bis(3‐octylthien‐2‐yl)ethylene])‐fluoren‐9‐one (TVF), whereas with (2,7‐bis‐(3,3?‐dioctyl‐[2,2′;5′,2″;5″,2?]quaterthiophen‐5‐yl)‐fluoren‐9‐one (QTF) PCE up to 1.2% (under AM 1.5 illumination, 100 mW cm^?2, active area 0.28 cm²) was obtained. The strong π‐stacking interactions in the solid state for this oligomer leading to improved morphology could explain the good performances of QTF‐based devices, which rank among the highest recorded for non‐polymeric materials. Consequently, fluorenone‐based non‐polymeric molecules constitute highly attractive materials for solution‐processable solar cell applications.     

Irradiation damage to frog inner ear during synchrotron radiation tomographic investigation

Unexpectedly severe radiation damage, showing up through deformation of the saccule, was encountered during a synchrotron radiation high-resolution (700 nm pixel size) tomographic observation of an inner ear, fixed in a formaldehyde solution, of the frog Rana esculenta. The visible displacement of the edge of the otoconia-filled part of the saccule amounted to about 100 μm after an irradiation with 20.5 keV X-ray photons corresponding to a dose of 1.5 kGy for the protein matrix. The close-knit coexistence of organic and mineral components in the biological tissue may be linked to the dramatic increase of radiation dosage sensitivity.     

Neuronal devices: understanding neuronal cultures through percolation helps prepare for the next step

Cultures of dissociated neurons are an invaluable experimental tool in studying neuronal networks at an intermediate scale in an in vitro controlled physico-chemical environment. Moreover, current micro-fabrication techniques allow the design of a custom connectivity between subpopulations, which could make it possible to carry out computations with devices involving living cells. The quorum percolation (QP) model has been designed in the context of neurobiology to describe bursts of activity occurring in neuronal cultures from the point of view of collective phenomena rather than from a dynamical synchronization approach. Such a model is well suited to describe triggered activity in neuronal devices, and its generic character points at the necessity of heavily structured devices to go beyond collective bursting. We derive a continuous extension of the QP model, seen as information propagation on a non-metric directed graph, and discuss how its critical behavior might give insight on the connectivity of neuronal networks. The link with metric graphs, embedded in a two-dimensional space, is tackled by the introduction of a geometrical model based upon a random walk, where axon growth is constrained by obstacles such as walls and channels. This provides a starting point for the construction of neuronal devices in vitro capable of more complex behaviors. Lastly, we show how simulations of bursts with a dynamical adaptive integrate-and-fire model can be interpreted in terms of QP, confirming the robustness of this synchronized behavior.     

Coupling semiconductor lasers into single-mode optical fibers by use of tips grown by photopolymerization

We show that a polymer tip, integrated by free-radical photopolymerization at the end of a telecommunication optical fiber, allows high-efficiency coupling between the fiber and an infrared laser diode. A coupling efficiency of 70% (1.5-dB loss) was achieved. We obtained this result by controlling the radius of curvature of the tip, the origin of which is discussed in terms of the photochemical influence of oxygen during tip formation. The experimental data were found to be in agreement with results of electromagnetic calculations based on the finite-element method.     

Dynamic roughening and fluctuations of dipolar chains

Nonmagnetic particles in a carrier ferrofluid acquire an effective dipolar moment when placed in an external magnetic field. This fact leads them to form chains that will roughen due to Brownian motion when the magnetic field is decreased. We study this process through experiments, theory and simulations, three methods that agree on the scaling behavior over 5 orders of magnitude. The rms width goes initially as t(1/2), then as t(1/4) before it saturates. We show how these results complement existing results on polymer chains, and how the chain dynamics may be described by a recent non-Markovian formulation of anomalous diffusion.