Minimization of empirical energy functions in proteins including hydrophobic surface area effects

We present analytical expressions to calculate the gradient of the water-accessible surface area of proteins with respect to Cartesian coordinates and dihedral angles. A detailed mathematical analysis leads to corrected equations for the gradient calculation used previously in the ANAREA program. To study the hydrophobic effect of solvent-protein interactions, our expressions have been implemented to further improve the program package FANTOM. We used this version of FANTOM to minimize the ECEPP/2 and the hydrophobic energy of tendamistat. © 1993 John Wiley & Sons, Inc.     

The mass spectra of small-ring hetero-cycles—II. Aziridinones (α-lactams)

The mass spectra of six aziridinones (α-lactams) are presented. The six aziridinones exhibit the same general fragmentation pattern, the primary processes being loss of the N-t-butyl group, loss of carbon monoxide and loss of t-butyl isocyanate. Several additional rearrangement or fragmentation processes are observed with specific α-lactams.     

Photochemische synthese von H2Fe3-komplexen und ihre aktivität bei der photokatalytischen hydrierung von olefinen und dienen

The photochemical reaction of the trinuclear complex Fe₃(CO)₁₀NSi(CH₃)₃ under hydrogen leads to substitution of the bridging carbonyl group by two hydrogens. The resulting complex H₂Fe₃(CO)₉NSi(CH₃)₃ acts as a catalyst in the photochemical hydrogenation of olefins and dienes.     

Vanillic acid 4-O-beta-D-(6'-O-galloyl) glucopyranoside and other constituents from the bark of Terminalia macroptera Guill.et Perr

A new phenolic glucoside gallate, vanillic acid 4-O-beta-D-(6'-O-galloyl) glucopyranoside (1) was isolated from the bark of Terminalia macroptera Guill.et Perr., together with 3,3',4'-tri-O-methylellagic acid (2) and two triterpene glucopyranosyl esters, 24-deoxysericoside (3) and chebuloside II (4). Compounds 2-4, not described previously for this plant, showed antimicrobial activities against Bacillus subtilis, while 3 and 4 possessed haemolytic properties. In both assays 1 was found to be inactive.     

Zur Synthese sulfonierter Derivate von 4-Amino-1,3-dimethylbenzol und 2-Amino-1,3-dimethylbenzol

Syntheses of Sulfonated Derivatives of 4-Amino-1, 3-dimethylbenzene and 2-Amino-1, 3-dimethylbenzene Direct sulfonation of 4-amino-1, 3-dimethylbenzene (1) and sulfonation of 4-nitro-1,3-dimethylbenzene ( 4 ) to 4-nitro-1,3-dimethylbenzene-6-sulfonic acid ( 3 ) followed by reduction yield 4-amino-1,3-dimethylbenzene-6-sulfonic acid ( 2 ). The isomeric 5-sulfonic acid ( 5 ) however is prepared solely by baking the acid sulfate salt of 1 . Reaction of sulfur dioxide with the diazonium chloride derived from 2-amino-4-nitro-1,3-dimethylbenzene ( 7 ) leads to 4-nitro-1,3-dimethylbenzene-2-sulfonyl chloride ( 8 ), which is successively hydrolyzed to 4-nitro-1,3-dimethylbenzene-2-sulfonic acid ( 9 ) and reduced to 4-amino-1, 3-dimethylbenzene-2-sulfonic acid ( 6 ). Treatment of 4-amino-6-bromo-1,3-dimethylbenzene ( 12 ) and 4-amino-6-chloro-1, 3-dimethylbenzene ( 13 ), the former obtained by reduction of 4-chloro-6-nitro-1,3-dimethyl-benzene ( 10 ) and the latter from 4-chloro-6-nitro-1, 3-dimethylbenzene ( 11 ), with oleum yield 4-amino-6-bromo-1,3-dimethylbenzene-2-sulfonic acid ( 14 ) and 4-amino-6-chloro-1,3-dimethylbenzene-2-sulfonic acid ( 15 ) respectively; subsequent carbon-halogen hydrogenolyses of 14 and 15 lead also to 6 (Scheme 1). Baking the acid sulfate salt of 2-amino-1, 3-dimethylbenzene ( 17 ) gives 2-amino-1, 3-dimethylbenzene-5-sulfonic acid ( 16 ), whereas the isomeric 4-sulfonic acid ( 18 ) can be prepared by either of the following three possible pathways: Sulfonation of 2-nitro-1,3-dimethylbenzene ( 20 ) to 2-nitro-1,3-dimethylbenzene-4-sulfonic acid ( 21 ) followed by reduction or sulfonation of 2-acetylamino-1,3-dimethylbenzene ( 19 ) to 2-acetylamino-1,3-dimethylbenzene-4-sulfonic acid ( 22 ) with subsequent hydrolysis or direct sulfonation of 17 . Further sulfonation of 18 yields 2-amino 1,3-dimethylbenzene-4,6-disulfonic acid ( 23 ), the structure of which is independently confirmed by reduction of unequivocally prepared 2-nitro- 1,:3-dimethylbenzene-4,6-disulfonic acid ( 24 )(Scheme 2).     

Photoreduction of Triplet Benzophenone by Tertiary Amines: Amine molecular structure and ketyl radical yield

The photoreduction of triplet benzophenone by 14 tertiary amines was investigated. The ketyl radical yields do not correlate with the quenching rate constants, nor with the electron donor propensity of the amines. Individual structural features of the amines seem to determine the photoreduction yields.     

Charged-particle multiplicity distribution in 100-GeV/c \bar pd and π− interactions

We present data on \(\bar pn\) and π^? n collisions obtained from an exposure of the 30′' FNAL deuterium filled bubble chamber to a mixed \({{\bar p} \mathord{\left/ {\vphantom {{\bar p} {\pi ^ - }}} \right. \kern-0em} {\pi ^ - }}\) beam with a momentum of 100 GeV/c. We find that in 17±2% of the collisions with the antiproton there is an interaction on the spectator while for the collisions with π^? mesons the corresponding number is 15±2%. The \(\bar pn\) and π^? n multiplicity distributions have average charged multiplicities of 6.46±0.07 and 6.53±0.08 respectively. The average multiplicities for both types of interactions are slightly smaller than those for the corresponding reactions on hydrogen by an amount that is the same as observed at other energies. As an estimate of \(\bar pn\) annihilation we have calculated the difference \(\sigma _n (\bar pn) - \sigma _n (pn)\) for each prong numbern. We find an average multiplicity of 9±1, a value close to that for \(\bar pp\) annihilation at the same energy. combining our data with lower energy \(\bar pn\) annihilation data, we observe that the average negative multiplicity is systematically larger than that for \(\bar pp\) annihilation similar to the difference between neutron and proton target data with other beam projectiles.     

1.5-Diaza-3.7-diphospha-cyclooctane

The alkyl (aryl)-bishydroxymethylphosphines react with primary amines to give the title compounds. With optically active amines optically active phosphines are formed.     

pH-sensitive modulation of the second hydration sphere in lanthanide(III) tetraamide-DOTA complexes: a novel approach to smart MR contrast media

The lanthanide(III) complexes of three tetraamide DOTA bearing pyridyl, phenolic and hydroxypyridyl substituents have been studied by NMR, luminescence and cyclic voltammetry. The relaxivity profiles of the gadolinium complexes of the pyridyl and phenolic ligands were flat and essentially the same between pH 2 and 8. The hydroxypyridyl ligand, however, exhibited two regions of enhanced relaxivity. The small relaxivity enhancement (25 %) at lower pH (pH 2-4) has been attributed to an increase in the prototropic exchange of the coordinated water molecule while the slightly larger enhancement (84 %) at higher pH (pH 6-9) reflects deprotonation of the ligand amide protons. Deprotonation of the amides results in the formation of an intramolecular acid-base pair interaction with the phenolic protons and this, in turn, causes a highly organized second hydration sphere to come into effect, thereby increasing the relaxivity. The water relaxivity of the Gd(3+)-hydroxypyridyl complex is further enhanced upon binding to serum albumin.