Crystalline protein domains and lipid bilayer vesicle shape transformations

Cellular membranes can take on a variety of shapes to assist biological processes including endocytosis. Membrane-associated protein domains provide a possible mechanism for determining membrane curvature. We study the effect of tethered streptavidin protein crystals on the curvature of giant unilamellar vesicles (GUVs) using confocal, fluorescence, and differential interference contrast microscopy. Above a critical protein concentration, streptavidin domains align and percolate as they form, deforming GUVs into prolate spheroidal shapes in a size-dependent fashion. We propose a mechanism for this shape transformation based on domain growth and jamming. Osmotic deflation of streptavidin-coated GUVs reveals that the relatively rigid streptavidin protein domains resist membrane bending. Moreover, in contrast to highly curved protein domains that facilitate membrane budding, the relatively flat streptavidin domains prevent membrane budding under high osmotic stress. Thus, crystalline streptavidin domains are shown to have a stabilizing effect on lipid membranes. Our study gives insight into the mechanism for protein-mediated stabilization of cellular membranes.     

Electrochemical detection of osmium tetroxide-labeled PCR-products by means of protective strands

This communication reports about how single-stranded 136 base polymerase chain reaction (PCR) products labeled with electrochemically active osmium tetroxide bipyridine can be detected voltammetrically by hybridization with probe strands immobilized on gold electrodes. These electroactive ssDNA targets have been obtained by means of Lambda Exonuclease treatment of the double-stranded PCR products followed by hybridization of the remaining single strands with short protective strands and covalent labeling with osmium tetroxide bipyridine. Square-wave voltammetric signals of these osmium labels have been obtained only upon hybridization with the immobilized probe strands. An optimal 50 °C hybridization temperature has been found with a saturation of the probe layer at 30 min hybridization time and 7.5 nmol/l target concentration. The blank capture probe layer alone did not yield any signal. Unprotected strands produced almost no interference. Such double-selective switch-on electrochemical hybridization assays hold great promise for the specific detection of PCR products.     

Operationally unsaturated pincer/rhenium complexes form metal carbenes from cycloalkenes and metal carbynes from alkanes

Operationally unsaturated (i.e., 16/18-electron) (PNPR)Re(H)4, where PNPR is N(SiMe2CH2PR2)2, is reactive at 22 degrees C with cyclic olefins. The first observed products are generally (PNPR)Re(H)2(cycloalkylidene), with hydrogenated olefin as the product of hydrogen abstraction from the tetrahydride. The tetrahydride complex with R = tBu generally fails to react (too bulky), that with R = cyclohexyl suffers a (controllable) tendency to abstraction of 3H from one ring, forming an eta3-cyclohexenyl compound, and that with R = iPr generally gives the richest bimolecular reactivity. The cyclic monoolefins studied show distinct reactivity, C6 giving first the carbene and then coordinated cyclohexadiene, C5 giving carbene, then diene, and then eta5-C5H5, C8 giving carbene and then eta2-cyclooctyne, and C12 giving an eta3-allyl. Norbornene gives a pi-complex of the norbornene in thermal equilibrium with its carbene isomer; at 90 degrees C, hydrocarbon ligand Calpha-Cbeta bond cleavage occurs to give, for the first time, a carbyne complex from an internal olefin. Two compounds synthesized here have the formal composition "(PNPR)Re + olefin", and each of these is capable of dehydrogenating the methyl group of a variety of alkanes at 110 degrees C to form (PNP)ReH triple bond (CR).     

The Damping of Balances

The paper gives a survey of the history of damping methods for balances. Representation on Egyptian drawings demonstrate that the person performing the weighing shortened the measuring time by holding the suspension cords and touching the beam. By means of delimiters, the Romans constricted the deflection amplitudes. In the 19th century, the movements of precision balances were damped with a brush. For analytical balances, locking mechanism were developed, often combined with levers lifting the weighing scales and the beam in order to relieve the knife-edges. Half-arresting was used to curtail weighings. Air damping was invented by Arzberger in 1875, and eddy current damping by Marek in 1906. In electronic balances, lag, lead and filter elements and absorptive attenuators are used. For digital balances, the fast-reacting nullification of eddy signals is applied. This revised version was published online in July 2006 with corrections to the Cover Date.     

Time‐resolved dynamic light scattering as a method to monitor compaction during protein folding

The mechanisms and the dynamics of protein folding are subject of a still increasing number of theoretical and experimental studies. While spectroscopic methods are already used for many years to measure the folding rates and to monitor the formation of secondary and tertiary structure, kinetic measurements of the compactness are only beginning to emerge. Time‐resolved dynamic light scattering (DLS) is a useful tool to follow the compaction during protein folding by measuring the hydrodynamic Stokes radius R_S. Additionally, changes in the state of association can be detected by simultaneous measurements of the scattering intensity. The usefulness of different techniques for time‐resolved DLS measurements and the general limits for kinetic DLS experiments are discussed first. Then we describe the adaptation of a stopped‐flow system (SFM‐3) to a DLS apparatus, the particular data acquisition schemes, and the experimentally attainable limits. The feasibility of stopped‐flow DLS is demonstrated by the results of folding investigations with ribonuclease A, phosphoglycerate kinase, and bovine α‐lactalbumin. Refolding was initiated by denaturant dilution jumps, which were repeated up to 100 times in order to obtain a reasonable signal‐to‐noise ratio. Kinetic DLS experiments can be performed fairly with a time resolution of one second. The time resolution of 100ms is probably the attainable limit. The capabilities of time‐resolved DLS and time‐resolved small‐angle X‐ray scattering are compared.     

A Remark on the Decay of Correlations for Mixed-Range Spin Vector Models

In this short note we present some explicit conditions under which the Theorem of Braga et al. (J. Stat. Phys. 129:587–591, 2007) can be extended to spin-spin correlation functions of mixed short-range/long-range ferromagnetic vector spin models in the disordered phase.     

Structure modulated electronic contributions to metalloenediyne reactivity: synthesis and thermal Bergman cyclization of MLX2 compounds

The synthesis of novel metalloendiyne complexes MLRX(2) (where L = 1,4-dibenzyl/diethyl-1,4-diaza-cyclododec-8-ene-6,10-diyne, X = halogen) are reported with their X-ray crystal structures and thermal Bergman cyclization temperatures. Two distinct types of constructs are obtained; the Zn(II) compounds are tetrahedral, while the Cu(II) and the Pd(II) compounds are all distorted- or square-planar. Each possesses structurally similar enediyne conformations and critical distances (3.75-3.88 A). The tetragonal Cu(II) species all exhibit Bergman cyclization temperatures between 140 and 150 degrees C in the solid state, while the square-planar Pd(II) analogues possess similar critical distances but cyclize at significantly higher temperatures (205-220 degrees C). In contrast, the Zn(II) derivatives show a marked halogen dependence, with X = Cl having the highest Bergman cyclization temperature, which is comparable to the Pd(II) square-planar set, while the ZnLX(2) compound with X = I shows the lowest Bergman cyclization temperature (144 degrees C), similar to the Cu(II) derivatives. Moreover, for the planar constructs, the R group has little influence on the cyclization temperatures; however, for the tetrahedral ZnLX(2) compounds, the steric influence of the R group plays a more significant role in the cyclization reaction coordinate by influencing the stability of the precyclized intermediate. This complex set of results is best interpreted by a combination of steric contributions and electronic interactions between the halogen through space (in the case of Zn(II)) and through bonds (in the case of Pd(II)) and the pi orbitals of the endiyne fragment. In contrast, for Cu(II) systems, the distorted square-planar geometry permits neither direct through space nor symmetry-allowed through bond communication between the orbital partners, and thus little variation in Bergman cyclization reactivity is observed.     

Reducing power of three-coordinate cobalt(I)

Carbon monoxide adds easily to (PNP)Co, PNP = N(SiMe2CH2PtBu2)2, to give (PNP)Co(CO), whose nuco value of 1885 cm-1 suggests much back-donation, and thus an easily oxidized Co(I) in (PNP)Co. However, Co(III) is inaccessible from (PNP)Co by oxidation with I2, the products being first (PNP)CoI, then the zwitterion [ItBu2PCH2SiMe2NSiMe2CH2PtBu2]CoI2. The potential two-electron oxidant N2CH(SiMe3) reacts with (PNP)Co to form a 1:1 "adduct", whose crystal structure is most consistent with oxidation of Co(I), but not fully to Co(III).