Functionalized self-assembled monolayers on ultraflat gold as platforms for single molecule force spectroscopy and imaging

Single molecule force spectroscopy is a valuable tool for studying unfolding and nanomechanical properties of proteins. The common practice is to stretch proteins from a surface that was dosed to give a reasonable hit rate and to analyze the curves that exhibit the expected characteristics of a single polymer. Whether the surface-bound proteins are indeed single and isolated remains unclear, and the undesirable protein/surface interactions that obscure informative features of the force curves are implicitly assumed to be absent. In this study, mixed self-assembled monolayers (SAMs) consisting of N-hydroxysuccinimide (NHS) and oligoethylene glycol (OEG) terminated thiols on an ultraflat gold surface were used to covalently immobilize proteins via lysine residues. By the optimization of attachment sites via lysine-NHS linkages amidst a protein-resistant layer of the OEG SAM, it was possible to isolate single proteins for study in a controlled fashion. The single protein distribution on the surface is clearly demonstrated by atomic force microscopy (AFM) imaging. The OEG also significantly reduces nonspecific tip-surface interactions between the cantilever and surface. Stretching covalently attached single proteins produces high-quality and reproducible force-extension curves. This experimental strategy is an attractive platform with which to study protein structure, interactions, and nanomechanical properties of single proteins.     

A new strategy for preparing molecular imaging and therapy agents using fluorine-rich (fluorous) soluble supports

A convenient new strategy for producing radiolabeled compounds in high effective specific activity was developed using soluble fluorous supports. The reported methodology involves a fluorous linker group that is released from the substrate of interest upon reaction with radioiodine. The desired product can then be selectively separated from unreacted starting material and reaction byproducts using a simple fluorous solid-phase extraction procedure. The utility of this approach was demonstrated by labeling a series of benzoic acid derivatives which are commonly used to prepare molecular imaging agents. All compounds were produced in high radiochemical yields, purities, and effective specific activities. The strategy was further elaborated in that it was used to prepare a small collection of radiolabeled benzamides as a way of demonstrating the potential utility of this method for creating libraries of molecular imaging agents.     

Multiscale mathematical modeling to support drug development

It is widely recognized that major improvements are required in the methods currently being used to develop new therapeutic drugs. The time from initial target identification to commercialization can be 10-14 years and incur a cost in the hundreds of millions of dollars. Even after substantial investment, only 30-40% of the candidate compounds entering clinical trials are successful. We propose that multiscale mathematical pathway modeling can be used to decrease time required to bring candidate drugs to clinical trial and increase the probability that they will be successful in humans. The requirements for multiple time scales and spatial scales are discussed, and new computational paradigms are identified to address the increased complexity of modeling.     

Microfluidic magnetophoretic separations of immunomagnetically labeled rare mammalian cells

Immunomagnetic isolation and magnetophoresis in microfluidics have emerged as viable techniques for the separation, fractionation, and enrichment of rare cells. Here we present the development and characterization of a microfluidic system that incorporates an angled permanent magnet for the lateral magnetophoresis of superparamagnetic beads and labeled cell-bead complexes. A numerical model, based on the relevant transport processes, is developed as a design tool for the demonstration and prediction of magnetophoretic displacement. We employ a dimensionless magnetophoresis parameter to efficiently investigate the design space, gain insight into the physics of the system, and compare results across the vast spectrum of magnetophoretic microfluidic systems. The numerical model and theoretical analysis are experimentally validated by the lateral magnetophoretic deflection of superparamagnetic beads and magnetically labeled breast adenocarcinoma MCF-7 cells in a microfluidic device that incorporates a permanent magnet angled relative to the flow. Through the dimensionless magnetophoresis parameter, the transition between regimes of magnetophoretic action, from hydrodynamically dominated (magnetic deflection) to magnetically dominated (magnetic capture), is experimentally identified. This powerful tool and theoretical framework enables efficient device and experiment design of biologically relevant systems, taking into account their inherent variability and labeling distributions. This analysis identifies the necessary beads, magnet configuration (orientation), magnet type (permanent, ferromagnetic, electromagnet), flow rate, channel geometry, and buffer to achieve the desired level of magnetophoretic deflection or capture.     

Wavelength tunable laser beam shaping

Laser beam shaping by phase-only transformations, often referred to as field mapping, has for a long time been considered wavelength dependent. In this Letter we outline a simple mathematical argument that shows how the problem may be formulated in a wavelength tunable manner, requiring only a minor adjustment in the observation plane. We verify the theoretical prediction by experiment using the example of a Gaussian-to-flattop-beam transformation, and we show that the shaping is valid across a wide range of wavelengths for a single diffractive optical element.     

The use of multi-channel silicone rubber traps as denuders for polycyclic aromatic hydrocarbons

Atmospheric polycyclic aromatic hydrocarbons are ubiquitous environmental pollutants, which may be present both in the gaseous phase and adsorbed onto the surface of particles. Denuders are sampling devices which have been effectively employed in such partitioning applications. Here we describe and characterise a novel miniature denuder consisting of two multi-channel silicone rubber traps (each 178 mm long, 6 mm o.d. containing 22 silicone tubes), separated by a quartz fibre filter for particle phase collection. The denuder only requires a small portable personal sampling pump to provide sampling flow rates of ∼0.5 L min⁻¹. Theoretical considerations indicated that the air flow through the denuder was expected to be laminar, and the linear velocity arising from longitudinal diffusion was found to be negligible. The calculated particle transmission efficiency through the denuder was found to be essentially 100% for particles > 50 nm, whilst the experimental overall efficiency, as determined by CPC and SMPS measurements, was 92 ± 4%. The size resolved transmission efficiency was <60% for particles below 20 nm and 100% for particles larger than 200 nm. Losses could have been due to diffusion and electrostatic effects. Semi-volatile gaseous analytes are pre-concentrated in the silicone of the trap and may be thermally desorbed using a commercially available desorber, allowing for total transfer and detection of the collected analytes by GC–MS. This enhances detection limits and allows for lower sampling flow rates and shorter sampling times, which are advantageous for studies requiring high temporal resolution.     

Synthesis and structural characterization of heterometallic thorium aluminum polynuclear molecular clusters

Aluminum can undergo hydrolysis in aqueous solutions leading to the formation of soluble molecular clusters, including polynuclear species that range from 1 to 2 nm in diameter. While the behavior of aluminum has been extensively investigated, much less is known about the hydrolysis of more complex mixed-metal systems. This study focuses on the structural characteristics of heterometallic thorium-aluminum molecular species that may have important implications for the speciation of tetravalent actinides in radioactive waste streams and environmental systems. Two mixed metal (Th(4+)/Al(3+)) polynuclear species have been synthesized under ambient conditions and structurally characterized by single-crystal X-ray diffraction. [Th(2)Al(6)(OH)(14)(H(2)O)(12)(hedta)(2)](NO(3))(6)(H(2)O)(12) (ThAl1) crystallizes in space group P2(1)/c with unit cell parameters of a = 11.198(1) ?, b = 14.210(2) ?, c = 23.115(3) ?, and β = 96.375° and [Th(2)Al(8)(OH)(12)(H(2)O)(10)(hdpta)(4)](H(2)O)(21) (ThAl2) was modeled in P1? with a = 13.136(4) ?, b = 14.481(4) ?, c = 15.819(4) ?, α = 78.480(9)°, β = 65.666(8)°, γ = 78.272(8)°. Infrared spectra were collected on both compounds, confirming complexation of the ligand to the metal center, and thermogravimetric analysis indicated that the thermal degradation of these compounds resulted in the formation of an amorphous product at high temperatures. These mixed metal species have topological relationships to previously characterized aluminum-based polynuclear species and may provide insights into the adsorption of tetravalent actinides on colloidal or mineral surfaces.     

Simulation of phase noise generated by white noise in 1.7 GHz CMOSLC oscillator

The phase noise resulting from upconversion of white noise in a CMOS LC oscillator is investigated. HSPICE simulations of phase noise resulting from the random-phase white noise in a 1.7 GHz CMOS LC oscillator have been performed and demonstrate that the phase noise resulting from the upconversion of white noise has a 1/f-dependence on the offset frequency and becomes larger as the white noise increases. The results provide a confirmation by circuit simulations of Leeson's empirical formula, and provide a technique for the design of low noise oscillators     

Cover Feature: Oxidation of Benzyl Alcohol Using Cobalt Oxide Supported Inside and Outside Hollow Carbon Spheres (ChemistryOpen 6/2021)

The Cover Feature shows the cobalt oxide nanoparticles supported both inside and outside hollow carbon spheres (HCSs), which serve as a catalyst for benzyl alcohol oxidation. A metal oxidation step prior to the reaction enhanced the catalytic activity of benzyl alcohol which was used as a model reaction for the catalysts. Both catalysts showed similar activity and selectivity (to benzaldehyde) whether placed inside or outside the HCSs (70% selectivity at 50% conversion). No poisoning was observed due to product build up in the HCSs. More information can be found in the Full Paper by Pumza Mente et al.     

Generalized pentagonal geometries

A pentagonal geometry PENT($k,r$) is a partial linear space, where every line is incident with $k$ points, every point is incident with $r$ lines, and for each point $x$, there is a line incident with precisely those points that are not collinear with $x$. Here we generalize the concept by allowing the points not collinear with $x$ to form the point set of a Steiner system $S\left(2,k,w\right)$ whose blocks are lines of the geometry.