Action-FRET of a Gaseous Protein

Mass spectrometry is an extremely powerful technique for analysis of biological molecules, in particular proteins. One aspect that has been contentious is how much native solution-phase structure is preserved upon transposition to the gas phase by soft ionization methods such as electrospray ionization. To address this question—and thus further develop mass spectrometry as a tool for structural biology—structure-sensitive techniques must be developed to probe the gas-phase conformations of proteins. Here, we report Förster resonance energy transfer (FRET) measurements on a ubiquitin mutant using specific photofragmentation as a reporter of the FRET efficiency. The FRET data is interpreted in the context of circular dichroism, molecular dynamics simulation, and ion mobility data. Both the dependence of the FRET efficiency on the charge state—where a systematic decrease is observed—and on methanol concentration are considered. In the latter case, a decrease in FRET efficiency with methanol concentration is taken as evidence that the conformational ensemble of gaseous protein cations retains a memory of the solution phase conformational ensemble upon electrospray ionization.

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μSR study of the S=1/2 triangular lattice antiferromagnet AgNiO2

AgNiO₂, a model compound of an S=1/2 triangular lattice, was studied by muon spin relaxation in addition to ac, dc susceptibility, electrical resistivity and neutron diffraction. The relaxation rate shows a sharp peak at around T_N=28 K followed by a sudden decrease of initial asymmetry indicating a magnetic ordering. Three internal fields ranging from 0.2 to 0.3 T were obtained from the muon precession period. However, a neutron diffraction experiment failed to detect any magnetic order at low temperatures. From these results, it was concluded that magnetic coherence is confined to small domain compared with the coherence length of neutron diffraction due to spin frustration. This revised version was published online in August 2006 with corrections to the Cover Date.     

Dynamic elastomers based on bio-derived crosslinker

Petroleum-derived monomers are the most common building blocks for ester-based thermosets. Bio-derived thermoset elastomers are becoming viable alternatives to conventional thermosets. Herein, we developed a biobased vitrimer-type thermoset elastomers using abundant and sustainable raspberry ketone as feedstock. We utilize raspberry ketone to create building blocks for dynamic oxime chemistry and crosslinked these through free radical polymerization with poly(ethylene glycol) methyl ether methacrylate as a comonomer. In contrast to other dynamic networks based on ester bonds, which need catalysts, this is undesirable since catalyst deactivation or leaching lowers its effect over time and may impair reuse. This network incorporates catalyst-free bond exchange reactions in catalyst-dependent polyester networks by substituting oxime-esters for typical ester linkages. The elastomer exhibits stress relaxation, a low glass transition temperature (T_g) (−55 to −40.2°C) and tensile strength up to 5.2 ± 3.0 kPa. Furthermore, the dynamic oxime transesterification exchange mechanism allows elastomers to be reprocessed using a hot press at 160°C and 8 × 10³ kPa pressure. After reprocessing, the tensile strength of elastomers can be recovered up to 78.1 ± 10.9%. This work integrates the principles of catalyst-free dynamic exchange process and mechanical recycling coupled with biobased components to provide a rational solution towards conventional elastomers. In the future, these elastomers can be exploited for the development of hydrogels, recyclable elastomers, and commodity plastics.     

Computations of a Hydrogen-Fueled Scramjet Combustor on Locally Refined Meshes

Simulations of an experimental hydrogen-fueled scramjet combustor are conducted using a novel dynamic hybrid Reynolds-averaged Navier-Stokes/large-eddy simulation (DHRL) modeling framework. The combustor has a Mach 2 core flow with a ramp fuel injector resulting in an equivalence ratio of 0.17. Three grid resolutions are obtained using local refinement by a factor of two in each direction in the fuel mixing and combustion region, and results from the three grids are used to understand the effect of grid refinement. Simulations reproduce temperature, pressure, velocity, and fuel concentrations in reasonable agreement with experimental measurements. Although heat release decreases on average, as the mesh is refined, peaks of heat release are intensified causing locally elevated temperatures. Spectral analysis of turbulence kinetic energy and heat release suggests stringent resolution requirements for reacting simulations capable of accurately resolving the effects of chemical reactions. Using the medium grid the DHRL model is compared to the improved delayed detached eddy simulation (IDDES) model and two Reynolds-averaged Navier-Stokes (RANS) models. Overall, the DHRL framework significantly outperforms other methods when compared to the experimental pressure rise. Additionally, spectral analysis suggests that the current framework is capable of accurately resolving turbulent structures at frequencies higher than IDDES. The study is the first documenting the use of DHRL for supersonic reacting flow and results suggest that it is a viable alternative to existing turbulence treatments for these types of flows.     

Correlation of the acidity of substituted phenols,anilines, and benzoic acids calculated by MNDO,AM1, and PM3 with Hammett-type substituent constants

Heats of formation and net atomic charges of some 120 structures involving substituted phenols, anilines, and benzoic acids and the corresponding anions were calculated by MNDO, AM1, and PM3 semiempirical methods. The gas phase acidities of substituted phenols and anilines and the net atomic charges on the anionic heteroatoms of the corresponding anions have been successfully correlated with σ^? constants. Moreover, good correlations with σ were found for the charges on the acidic hydrogens of substituted phenols and anilines. In contrast, the gas phase acidities of substituted benzoic acids and the charges on the anionic oxygens of the corresponding anions are better correlated with Taft σ° constants. Comparisons of these results with experimental data and ab initio theoretical calculations indicate that AM1 and PM3 methods are much better than MNDO in predicting the acidity of aromatic compounds.     

A High‐Energy Aqueous Aluminum‐Manganese Battery

Rechargeable aluminum‐ion batteries have drawn considerable attention as a new energy storage system, but their applications are still significantly impeded by critical issues such as low energy density and the lack of excellent electrolytes. Herein, a high‐energy aluminum‐manganese battery is fabricated by using a Birnessite MnO₂ cathode, which can be greatly optimized by a divalence manganese ions (Mn²⁺) electrolyte pre‐addition strategy. The battery exhibits a remarkable energy density of 620 Wh kg^?1 (based on the Birnessite MnO₂ material) and a capacity retention above 320 mAh g^?1 for over 65 cycles, much superior to that with no Mn²⁺ pre‐addition. The electrochemical reactions of the battery are scrutinized by a series of analysis techniques, indicating that the Birnessite MnO₂ pristine cathode is first reduced as Mn²⁺ to dissolve in the electrolyte upon discharge, and Al_xMn_(1?x)O₂ is then generated upon charge, serving as a reversible cathode active material in following cycles. This work provides new opportunities for the development of high‐performance and low‐cost aqueous aluminum‐ion batteries for prospective applications.     

Multi-component self-assembled molecular-electronic films: towards new high-performance thermoelectric systems

The thermoelectric properties of parallel arrays of organic molecules on a surface offer the potential for large-area, flexible, solution processed, energy harvesting thin-films, whose room-temperature transport properties are controlled by quantum interference (QI). Recently, it has been demonstrated that constructive QI (CQI) can be translated from single molecules to self-assembled monolayers (SAMs), boosting both electrical conductivities and Seebeck coefficients. However, these CQI-enhanced systems are limited by rigid coupling of the component molecules to metallic electrodes, preventing the introduction of additional layers which would be advantageous for their further development. These rigid couplings also limit our ability to suppress the transport of phonons through these systems, which could act to boost their thermoelectric output, without comprising on their impressive electronic features. Here, through a combined experimental and theoretical study, we show that cross-plane thermoelectricity in SAMs can be enhanced by incorporating extra molecular layers. We utilize a bottom-up approach to assemble multi-component thin-films that combine a rigid, highly conductive ‘sticky’-linker, formed from alkynyl-functionalised anthracenes, and a ‘slippery’-linker consisting of a functionalized metalloporphyrin. Starting from an anthracene-based SAM, we demonstrate that subsequent addition of either a porphyrin layer or a graphene layer increases the Seebeck coefficient, and addition of both porphyrin and graphene leads to a further boost in their Seebeck coefficients. This demonstration of Seebeck-enhanced multi-component SAMs is the first of its kind and presents a new strategy towards the design of thin-film thermoelectric materials.

Through an experimental and theoretical study, cross-plane thermoelectricity in Self-Assembled Monolayers (SAMs) was enhanced by adding extra molecular layers, presenting a new strategy towards the design of high thermoelectric materials.