An average fock operator technique of approximate open-shell LCAO-MO-SCF calculation

The exchange part of the usual Hartree-Fock potential in the unrestricted Hartree-Fock (UHF) theory is suitablyaveraged to construct an, average one-electron model Hamiltonian which generates a set of spin-restricted one-electron orbitals in a self-consistent manner. These orbitals are then used to calculate the electronic energy of the open-shell system by using the proper functional form for the energy which handles the exchange terms correctly. The eigenvalues ofF ^av can be used for calculating either the spin-polarised or spin-averaged ionisation potentials of different orbitals at theKoopmans’ theorem level of approximation. Comparison ofE ^ac with the UHF-energy shows thatE _UHF<E ^ac in each case revealing some kind of an upper bound nature ofE ^ac. An approximate variational argument is given. Relationship of our model with the hyper-Hartree-Fock theory of slater is explored and the general problem of eliminating ‘self-interaction’ terms in average Fock-operator based theories is discussed.     

Highly efficient recycling of a "sandwich" type polyoxometalate oxidation catalyst using solvent resistant nanofiltration

A "sandwich" type polyoxometalate catalyst ([MeN(n-C8H17)3]12[WZn3(ZnW9O34)2]) was very efficiently recycled by nanofiltration with almost quantitative retention, using an alpha-alumina supported mesoporous gamma-alumina membrane.     

Synthesis and properties of a new member of the calixnaphthalene family: a C(2)-symmetrical endo-calix[4]naphthalene

The synthesis of a new endo-calix[4]naphthalene is described. The reaction sequence involves the cyclocondensation of a key bisnaphthylmethane intermediate (8) with formaldehyde. This key intermediate (8) is formed using a modified Suzuki-Miyaura Pd-catalyzed cross-coupling reaction between bromomethylnaphthyl (6) and naphthylboronic acid (7), both of which can be derived from 2-hydroxynaphthoic acid.     

Thermodynamic and lfer studies for the oxidation of anilines by the periodate ion

The various thermodynamic parameters for the periodate oxidation of six anilines, viz. aniline, p-chloroaniline, p-ethoxyaniline, o- and p-methoxyanilines and p-methylaniline have been reported and discussed. The validity of the isokinetic relationship and various linear free energy relationships (LFERs) have been tested and discussed. An attempt has been made to correlate these findings with the mechanism operative in these reactions.     

Toward the molecular flashlight: preparation,properties, and photophysics of a hypericin-luciferin tethered molecule

The synthesis of a molecule containing hypericin and luciferin moieties joined by a tether is reported. The light-induced (in vitro) antiviral activity as well as the photophysical properties of this new compound are measured and compared with those of the parent compounds, hypericin and pseudohypericin. This tethered molecule exhibits excited-state behavior that is very similar to that of its parent compounds and antiviral activity that is identical, within experimental error, to that of its more closely related parent compound, pseudohypericin. The implications for a photodynamic therapy that is independent of external light sources are discussed.     

Intramolecular nitrone cycloaddition reaction on carbohydrate-based precursors: application in the synthesis of spironucleosides and spirobisnucleosides

A simple synthesis of chiral spironucleosides and spirobisnucleosides is described. Intramolecular 1,3-dipolar nitrone cycloaddition reaction of d-glucose-derived precursors having olefin at C-3 and nitrone at C-5, C-1, or C-2 (in nor-series) furnished bisisoxazolidinospirocycles 4-7, 11, and 12 in good yields. Reductive ring opening of the isoxazolidine moieties in 4-6 followed by construction of a nucleoside base upon the generated amino groups smoothly yielded spirobisnucleosides 17 and 18 and spironucleosides 20 and 21.     

Free energy of mixing of cross-linked polymer blends

Free energy of mixing of cross-linked polymer blends is derived, as a modification to the Flory-Huggins-de Gennes free energy functional for linear polymer blends. The latter arrives from the assumption of mean-field, short-range thermal interactions among ideal Gaussian chains. However, upon cross-linking a linear chain, the chain no longer remains Gaussian; new chain architectures belying the threadlike image of linear chains emerge. Fractal dimensions of these nonlinear chain clusters convene and command new entropic interactions. Topological constraints by cross-links introduce long-range nonequilibrium elastic forces. Relatively shorter range steric repulsions between fractal network surfaces may arrive if cross-linking is carried out inside the blend's thermodynamically unstable region. Modified free energy has been used to highlight experiments on phase instability of cross-linked polymer blends.     

Radiationless transitions in trivalent lanthanide ions embedded in solids

Radiationless transitions in lanthanide ions embedded in glassy and crystalline hosts have been briefly reviewed. The correlations of multiphonon relaxation rates with energy gaps, vibrational frequencies, temperatures and electronic symmetries have been discussed. The essence of various theories, such as Nth order methods, non-adiabatic Hamiltonian method, dynamic coupling model has also been presented.     

Pose scoring by NMR

Recently, we have developed a fast approach to calculate NMR chemical shifts using the divide and conquer method at the semiempirical level. To demonstrate the utility of this approach for characterizing protein-ligand interactions, we used the deviation of calculated chemical shift perturbations from experiment to determine the orientation of a ligand (GPI-1046) in the binding pocket of the FK506 binding protein (FKBP12). Moreover, we were able to select the native state of the ligand from a collection of decoy poses. A key hydrogen bond between O1 and HN in Ile56 was also identified. Our results suggest that ligand-induced chemical shift perturbations can be used to refine protein/ligand structures.