Metabolomic applications of electrochemistry/Mass spectrometry

Analytical techniques used for multivariate analysis of endogenous metabolites in biological systems (e.g., metabolomics, metabonomics) must be capable of accurately and selectively monitoring many known and unknown molecules that span a diverse chemical spectrum and over extremely large dynamic concentration ranges. Mass spectrometric (MS) and electrochemical array (EC-Array) detection have been widely used for multi-component analysis with applicability to low-level (fmol) metabolites. Described here are practical considerations and results obtained with the combined use of EC-Array and MS for HPLC-based multivariate metabolomic analysis. Data presented include the study of changes in rat urinary metabolite profiles associated with xenobiotic toxin exposure analyzed by HPLC using water:acetonitrile binary gradient conditions and post-column flow splitting between EC-Array and MS detectors. Results show complementary quantitative and qualitative analysis and the ability to differentiate sample groups consistent with xenobiotic-induced histopathological changes. The potential applicability of this hyphenated technique for biomarker elucidation through measurement of redox active compounds that are commonly associated with disease pathology and xenobiotic toxicity is discussed. The use of EC reactor cells in series with MS is also presented as a means of producing likely metabolites to facilitate structural elucidation and confirmation.     

Maximum thermal conductance for a micro-channel,utilising Newtonian and non-Newtonian fluid

This paper investigates the thermal behaviour of two micro-channel elements cooled by Newtonian and non-Newtonian fluids, with the objective to maximise thermal conductance subject to constraints. This is done firstly for a two-dimensional duct micro-channel and secondly for a three-dimensional complex micro-channel. A numerical model is used to solve the governing equations relating to flow and temperature fields for both cases. The geometric configuration of each cooling channel is optimised for Newtonian and non-Newtonian fluid at a fixed inlet velocity and heat flux. In addition, the effect of porosity on thermal conductance is investigated. It was found, in both cases, that the non-Newtonian fluid characteristics result in a significant variation in thermal conductance as inlet velocity is increased. The characteristics of a dilatant fluid greatly reduce thermal conductance on account of shear thickening on the boundary surface. In contrast, a pseudoplastic fluid shows increased thermal conductance. A comparison of the complex micro-channel and the duct micro-channel shows the improved thermal conductance resulting from greater flow access to the conductive area, achieved by the complex micro-channel.     

Coverage-dependent adsorption geometry of octithiophene on Au(111)

The adsorption behavior of α-octithiophene (8T) on the Au(111) surface as a function of 8T coverage has been studied with low-temperature scanning tunneling microscopy, high resolution electron energy loss spectroscopy as well as with angle-resolved two-photon photoemission and ultraviolet photoemission spectroscopy. In the sub-monolayer regime 8T adopts a flat-lying adsorption geometry. Upon reaching the monolayer coverage the orientation of 8T molecules changes towards a tilted configuration, with the long molecular axis parallel to the surface plane, facilitating attractive intermolecular π-π-interactions. The photoemission intensity from the highest occupied molecular orbitals (HOMO and HOMO - 1) possesses a strong dependence on the adsorption geometry due to the direction of the involved transition dipole moment for the respective photoemission process. The change in molecular orientation as a function of coverage in the first molecular layer mirrors the delicate balance between intermolecular and molecule/substrate interactions. Fine tuning of these interactions opens up the possibility to control the molecular structure and accordingly the desirable functionality.     

A new dimension in cyclic coinage metal pyrazolates: decoration with a second ring of coinage metals supported by inter-ring metallophilic interactions

When pyrazolate ligands with thioether chelate arms are used in cyclic coinage metal pyrazolates [Au(μ-pz)](n), the inner gold ring can be framed with an outer silver ring to give novel heterometallic double-crowned complexes [AuAg(μ-L(x))(BF(4))](4). They feature short intramolecular in-plane Ag-Au interactions, are stable as octanuclear species in solution, and show promising luminescence properties.     

Cyto-mechanoresponsive polyelectrolyte multilayer films

Cell adhesion processes take place through mechanotransduction mechanisms where stretching of proteins results in biological responses. In this work, we present the first cyto-mechanoresponsive surface that mimics such behavior by becoming cell-adhesive through exhibition of arginine-glycine-aspartic acid (RGD) adhesion peptides under stretching. This mechanoresponsive surface is based on polyelectrolyte multilayer films built on a silicone sheet and where RGD-grafted polyelectrolytes are embedded under antifouling phosphorylcholine-grafted polyelectrolytes. The stretching of this film induces an increase in fibroblast cell viability and adhesion.     

Conformational basis for asymmetric seeding barrier in filaments of three- and four-repeat tau

Tau pathology in Alzheimer's disease is intimately linked to the deposition of proteinacious filaments, which akin to infectious prions, have been proposed to spread via seeded conversion. Here we use double electron-electron resonance (DEER) spectroscopy in combination with extensive computational analysis to show that filaments of three- (3R) and four-repeat (4R) tau are conformationally distinct. Distance measurements between spin labels in the third repeat, reveal tau amyloid filaments as ensembles of known β-strand-turn-β-strand U-turn motifs. Whereas filaments seeded with 3R tau are structurally homogeneous, filaments seeded with 4R tau are heterogeneous, composed of at least three distinct conformers. These findings establish a molecular basis for the seeding barrier between different tau isoforms and offer a new powerful approach for investigating the composition and dynamics of amyloid fibril ensembles.     

Synthesis of uranium(VI) terminal oxo complexes: molecular geometry driven by the inverse trans-influence

Oxidation of our previously reported uranium(V) oxo complexes, supported by the chelating ((R)ArO)(3)tacn(3-) ligand system (R = tert-butyl (t-Bu), 1-t-Bu; R = 1-adamantyl (Ad), 1-Ad), yields terminal uranium(VI) oxo complexes [(((R)ArO)(3)tacn)U(VI)(O)]SbF(6) (R = t-Bu, 2-t-Bu; R = Ad, 2-Ad). These complexes differ in their molecular geometry in that 2-t-Bu possesses pseudo-C(s) symmetry in solution and solid state as the terminal oxo ligand lies in the equatorial plane (as defined by the three aryloxide arms of the ligand) in order to accommodate the thermodynamic preference of high-valent uranium oxo complexes to have a σ- and π-donating ligand trans to the oxo (vis-à-vis the ubiquity of the linear UO(2)(2+) moiety). The distortion of the ligand--which stands in contrast to all other complexes of uranium supported by the ((R)ArO)(3)tacn(3-) ligand, including 2-Ad--is most clearly seen in the structures of 2-t-Bu, [(((t-Bu)ArO)(3)tacn)U(VI)(O)(eq)]SbF(6), and 3-t-Bu, [(((t-Bu)ArO)(3)tacn)U(VI)(O)(eq)(OC(O)CF(3))(ax)]. The solid-state structure of 3-t-Bu reveals that the trans U-O(ArO) bond length is shortened by 0.1 ? in comparison to the cis U-O(ArO) bonds and the trans U-O-C(ipso) angle is linearized (157.67° versus 147.85° and 130.03°). Remarkably, the minor modification of the ligand to have Ad groups at the ortho positions of the aryloxide arms is sufficient to stabilize a C(3v)-symmetric terminal uranium(VI) oxo complex (2-Ad) without a ligand trans to the oxo. These experimental results were reproduced in DFT calculations and allow the qualitative bracketing of the relative thermodynamic stabilization afforded by the inverse trans-influence as ～6 kcal mol(-1).     

STM manipulation of a subphthalocyanine double-wheel molecule on Au(111)

A new class of double-wheel molecules is manipulated on a Au(111) surface by the tip of a scanning tunneling microscope (STM) at low temperature. The double-wheel molecule consists of two subphthalocyanine wheels connected by a central rotation carbon axis. Each of the subphthalocyanine wheels has a nitrogen tag to monitor its intramolecular rolling during an STM manipulation sequence. The position of the tag can be followed by STM, allowing us to distinguish between the different lateral movements of the molecule on the surface when manipulated by the STM tip.     

Stability of semilinear elliptic optimal control problems with pointwise state constraints

A semi-linear elliptic control problems with distributed control and pointwise inequality constraints on the control and the state is considered. The general optimization problem is perturbed by a certain class of perturbations, and we establish convergence of local solutions of the perturbed problems to a local solution of the unperturbed optimal control problem. This class of perturbations include finite element discretization as well as data perturbation such that the theory implies convergence of finite element approximation and stability w.r.t.?noisy data.